; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010859 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010859
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF1771 domain-containing protein
Genome locationscaffold35:2542332..2548746
RNA-Seq ExpressionMS010859
SyntenyMS010859
Gene Ontology termsNA
InterPro domainsIPR013899 - Domain of unknown function DUF1771


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439864.1 PREDICTED: putative nuclear RNA export factor SDE5 isoform X1 [Cucumis melo]2.0e-16270.45Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKG--SENSYQVNGSQKTAKPKI
        MTGKE YG+NASK  +ED+VL SL+DAFGS FSL+EIASAY KA Y ADLA EIL+Q + ST +SA N  +GNGDNLGKG  SE  YQV G+ KTAK K+
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKG--SENSYQVNGSQKTAKPKI

Query:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL
        QPFS GTVS++IGKEYA SK S N FT+V KPV+V +KVLHESSSEGDCT+  S+  LH +ME+FLFKMLGDGFRLKREVIREV+G       +SMENLL
Subjt:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL

Query:  NRSTIPVEERRGSGNKPNGT--LTCYSLLSLKLM-------FIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMK
        NRST PV+ER GSGNK   +   TC    S+          +    SRNGN+ASSKK LE+TNL KTR DLQKE+LT LFNASEEPEEE P RR V + K
Subjt:  NRSTIPVEERRGSGNKPNGT--LTCYSLLSLKLM-------FIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMK

Query:  RSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLD--VDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQL
        + GA+GQLVSEPFKD+DAE EK VE+  +  LD  V+DEEN+YQLLRKAVREYRGTM EYYAAAIDAFAKGD VRAAKL DEGHFF KKAQEADEQS QL
Subjt:  RSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLD--VDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQL

Query:  IFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
        IF+P R+ADTEDDE+LLDLH+LGG+EAV VLKSQISSLS IPSIKHLKVI+EA+DK+TSKRSCRRLV
Subjt:  IFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV

XP_022142234.1 putative nuclear RNA export factor SDE5 isoform X1 [Momordica charantia]7.4e-22693.61Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP
        MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNL KGSENSYQ NGSQKTAKPKIQP
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP

Query:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR
        FSAGTVSSVIGKEYARSKSSANQFTQVYKPV+VGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLG       +SMENLLNR
Subjt:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR

Query:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
        STIPVEERRGSGNKPNGT T  S           P  NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
Subjt:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE

Query:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD
        PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAID FAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDP RNADTEDD
Subjt:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD

Query:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
        EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
Subjt:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV

XP_022142235.1 putative nuclear RNA export factor SDE5 isoform X2 [Momordica charantia]7.9e-21293.24Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP
        MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNL KGSENSYQ NGSQKTAKPKIQP
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP

Query:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR
        FSAGTVSSVIGKEYARSKSSANQFTQVYKPV+VGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLG       +SMENLLNR
Subjt:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR

Query:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
        STIPVEERRGSGNKPNGT T  S           P  NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
Subjt:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE

Query:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD
        PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAID FAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDP RNADTEDD
Subjt:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD

Query:  EILLDLHNLGGREAVSVLKSQISSLSQIP
        EILLDLHNLGGREAVSVLKSQISSLSQIP
Subjt:  EILLDLHNLGGREAVSVLKSQISSLSQIP

XP_022142236.1 putative nuclear RNA export factor SDE5 isoform X3 [Momordica charantia]7.9e-21292.4Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP
        MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNL KGSENSYQ NGSQKTAKPKIQP
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP

Query:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR
        FSAGTVSSVIGKEYARSKSSANQFTQVYKPV+VGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLG       +SMENLLNR
Subjt:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR

Query:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
        STIPVEERRGSGNKPNGT T  S           P  NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
Subjt:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE

Query:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD
        PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAID FAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDP RNADTEDD
Subjt:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD

Query:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHL
        EILLDLHNLGGREAVSVLKSQISSLSQIP  + L
Subjt:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHL

XP_038881794.1 putative nuclear RNA export factor SDE5 [Benincasa hispida]1.5e-16271.52Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKG--SENSYQVNGSQKTAKPKI
        MTGKE YGV+ASK  +EDV LKSL+DAFGS FSL EIASAY +A + ADLA EIL+Q QGST SSASNG++ NGDNL KG  SE SYQV G+ KTAK K+
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKG--SENSYQVNGSQKTAKPKI

Query:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL
        QPFS GTVS++IGKE+A SK SAN+FT+VYKPV+VGVKVLHESS EGDCT+  S+ HLH DME+FLFKMLGDGF LKREVIREV+G       +SMENLL
Subjt:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL

Query:  NRSTIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSR---------NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMK
        NRST P EER GSGNK +  +T  S     L  I C            NGNMASSKK LELTNL KTR DLQKEIL  LF+ASEEPEEE P RRTV + K
Subjt:  NRSTIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSR---------NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMK

Query:  RSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLD--VDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQL
        +  A+GQLVSEPF+DMDAE EK V+++ +  LD  V+DEEN+YQLLRKAVREYR TM EYYAAAIDAFAKGD VRA KL DEGHF+ KKAQEADEQS QL
Subjt:  RSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLD--VDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQL

Query:  IFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
        IF+P RNADTE+DEILLDL++LGGREAVSVLKSQISSLS IPSIKHLKV +EA+DKDTSKRSCRRLV
Subjt:  IFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV

TrEMBL top hitse value%identityAlignment
A0A1S3B0H0 putative nuclear RNA export factor SDE5 isoform X19.6e-16370.45Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKG--SENSYQVNGSQKTAKPKI
        MTGKE YG+NASK  +ED+VL SL+DAFGS FSL+EIASAY KA Y ADLA EIL+Q + ST +SA N  +GNGDNLGKG  SE  YQV G+ KTAK K+
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKG--SENSYQVNGSQKTAKPKI

Query:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL
        QPFS GTVS++IGKEYA SK S N FT+V KPV+V +KVLHESSSEGDCT+  S+  LH +ME+FLFKMLGDGFRLKREVIREV+G       +SMENLL
Subjt:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL

Query:  NRSTIPVEERRGSGNKPNGT--LTCYSLLSLKLM-------FIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMK
        NRST PV+ER GSGNK   +   TC    S+          +    SRNGN+ASSKK LE+TNL KTR DLQKE+LT LFNASEEPEEE P RR V + K
Subjt:  NRSTIPVEERRGSGNKPNGT--LTCYSLLSLKLM-------FIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMK

Query:  RSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLD--VDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQL
        + GA+GQLVSEPFKD+DAE EK VE+  +  LD  V+DEEN+YQLLRKAVREYRGTM EYYAAAIDAFAKGD VRAAKL DEGHFF KKAQEADEQS QL
Subjt:  RSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLD--VDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQL

Query:  IFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
        IF+P R+ADTEDDE+LLDLH+LGG+EAV VLKSQISSLS IPSIKHLKVI+EA+DK+TSKRSCRRLV
Subjt:  IFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV

A0A6J1CKC5 putative nuclear RNA export factor SDE5 isoform X23.8e-21293.24Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP
        MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNL KGSENSYQ NGSQKTAKPKIQP
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP

Query:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR
        FSAGTVSSVIGKEYARSKSSANQFTQVYKPV+VGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLG       +SMENLLNR
Subjt:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR

Query:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
        STIPVEERRGSGNKPNGT T  S           P  NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
Subjt:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE

Query:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD
        PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAID FAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDP RNADTEDD
Subjt:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD

Query:  EILLDLHNLGGREAVSVLKSQISSLSQIP
        EILLDLHNLGGREAVSVLKSQISSLSQIP
Subjt:  EILLDLHNLGGREAVSVLKSQISSLSQIP

A0A6J1CL01 putative nuclear RNA export factor SDE5 isoform X13.6e-22693.61Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP
        MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNL KGSENSYQ NGSQKTAKPKIQP
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP

Query:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR
        FSAGTVSSVIGKEYARSKSSANQFTQVYKPV+VGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLG       +SMENLLNR
Subjt:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR

Query:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
        STIPVEERRGSGNKPNGT T  S           P  NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
Subjt:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE

Query:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD
        PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAID FAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDP RNADTEDD
Subjt:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD

Query:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
        EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
Subjt:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV

A0A6J1CLL7 putative nuclear RNA export factor SDE5 isoform X33.8e-21292.4Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP
        MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNL KGSENSYQ NGSQKTAKPKIQP
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQP

Query:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR
        FSAGTVSSVIGKEYARSKSSANQFTQVYKPV+VGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLG       +SMENLLNR
Subjt:  FSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNR

Query:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
        STIPVEERRGSGNKPNGT T  S           P  NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE
Subjt:  STIPVEERRGSGNKPNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSE

Query:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD
        PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAID FAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDP RNADTEDD
Subjt:  PFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDD

Query:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHL
        EILLDLHNLGGREAVSVLKSQISSLSQIP  + L
Subjt:  EILLDLHNLGGREAVSVLKSQISSLSQIPSIKHL

A0A6J1KLP7 putative nuclear RNA export factor SDE54.0e-16170.78Show/hide
Query:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLG--KGSENSYQVNGSQKTAKPKI
        MTGKE  GVN SK  +ED +LKSL DAFGS FSL+EIASAYLKA Y+A+LA EIL+Q QGST SSASNG++GNGDNLG  K  E SYQV G+QKT K K+
Subjt:  MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLG--KGSENSYQVNGSQKTAKPKI

Query:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL
        QPFSAGTVS+VIGKEYARSK SAN  T+VYKPV+VGVK LHES  EG+CT   S+ HLH DME+FLFKMLGDGF+LKREVIREVLG       +SME LL
Subjt:  QPFSAGTVSSVIGKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLL

Query:  NRSTIPVEERRGSG-NKPNGTLTCYSLLSLKLMFIFCPSR-----NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSG
        NRS  PV+ER GSG N  + T+   S   L       P       NGN+ASSKK +ELTN  K R DLQKE+LT LFNASEEPEEELP RRTV +MK+S 
Subjt:  NRSTIPVEERRGSG-NKPNGTLTCYSLLSLKLMFIFCPSR-----NGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSG

Query:  AFGQLVSEPFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPS
        A   L+SEPFKDM+AE EK VE++ + SLD + EE++YQLLRKAVREYRGTM EYYAA IDAFAKGD VRAAKL DEGHFF KKAQEADEQS QL+F+PS
Subjt:  AFGQLVSEPFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPS

Query:  RNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV
         NADTEDDE+LLDLH++GG+EAV VLKSQISSLS IPSIKHLKVI EA+DKDTSKRSCRRLV
Subjt:  RNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKDTSKRSCRRLV

SwissProt top hitse value%identityAlignment
Q9LUQ3 Putative nuclear RNA export factor SDE54.3e-4333.56Show/hide
Query:  LKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSS---ASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQPFSAGTVSSVIGKEYARS
        L+ LLD FGS FSLD+IA+AY +A  + D+A EIL      TP                +    E   Q +   K  +PK    S GTVSSVIGKEYAR+
Subjt:  LKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSS---ASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQPFSAGTVSSVIGKEYARS

Query:  KSSANQFTQVYKPVQVGVKVLHES---SSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNRSTIPVEERRGSGNK
        +  +N   +  KP+++  + + E+   S E   +N    S    D+E F+ KMLG+GF+  +EVI +VLG       +S E LL+ S        G  N+
Subjt:  KSSANQFTQVYKPVQVGVKVLHES---SSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNRSTIPVEERRGSGNK

Query:  ------PNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAE
              P    T  + + L+ +     +R      S++G    N       L+KE+L  LF+ +E   ++ P+       +R G  G+ V +P +D   E
Subjt:  ------PNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAE

Query:  DEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADT---EDDEILLD
            V+ Q+ N+   DD+EN ++  RKAVRE+   M EYY AA +AF+KG+  RA +L ++GHFF +KA+EAD++S   + D ++  D+   ED+ + ++
Subjt:  DEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADT---EDDEILLD

Query:  LHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKD-TSKR
        ++    +EA+ +LK Q+   S I S K+L+V +    +D  SKR
Subjt:  LHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKD-TSKR

Arabidopsis top hitse value%identityAlignment
AT3G15390.1 silencing defective 53.0e-4433.56Show/hide
Query:  LKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSS---ASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQPFSAGTVSSVIGKEYARS
        L+ LLD FGS FSLD+IA+AY +A  + D+A EIL      TP                +    E   Q +   K  +PK    S GTVSSVIGKEYAR+
Subjt:  LKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSS---ASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQPFSAGTVSSVIGKEYARS

Query:  KSSANQFTQVYKPVQVGVKVLHES---SSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNRSTIPVEERRGSGNK
        +  +N   +  KP+++  + + E+   S E   +N    S    D+E F+ KMLG+GF+  +EVI +VLG       +S E LL+ S        G  N+
Subjt:  KSSANQFTQVYKPVQVGVKVLHES---SSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNRSTIPVEERRGSGNK

Query:  ------PNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAE
              P    T  + + L+ +     +R      S++G    N       L+KE+L  LF+ +E   ++ P+       +R G  G+ V +P +D   E
Subjt:  ------PNGTLTCYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAE

Query:  DEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADT---EDDEILLD
            V+ Q+ N+   DD+EN ++  RKAVRE+   M EYY AA +AF+KG+  RA +L ++GHFF +KA+EAD++S   + D ++  D+   ED+ + ++
Subjt:  DEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADT---EDDEILLD

Query:  LHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKD-TSKR
        ++    +EA+ +LK Q+   S I S K+L+V +    +D  SKR
Subjt:  LHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKD-TSKR

AT3G15390.2 silencing defective 59.5e-2236.27Show/hide
Query:  LQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGD
        L+KE+L  LF+ +E   ++ P+       +R G  G+ V +P +D   E    V+ Q+ N+   DD+EN ++  RKAVRE+   M EYY AA +AF+KG+
Subjt:  LQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLDVDDEENTYQLLRKAVREYRGTMNEYYAAAIDAFAKGD

Query:  YVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADT---EDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKD-TSKR
          RA +L ++GHFF +KA+EAD++S   + D ++  D+   ED+ + ++++    +EA+ +LK Q+   S I S K+L+V +    +D  SKR
Subjt:  YVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADT---EDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEANDKD-TSKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGGAAAGGAAGCATATGGAGTGAACGCATCAAAATTCGGCAAGGAGGACGTGGTGCTCAAGTCTTTGCTTGATGCTTTTGGTTCTACATTTTCACTTGATGAAAT
AGCTTCTGCCTATTTGAAGGCAGACTACAGTGCAGATTTGGCTGCTGAAATCTTGTACCAAACGCAGGGAAGCACCCCTAGCTCCGCATCTAATGGCAAGATAGGAAATG
GAGATAATTTGGGTAAAGGTTCTGAGAATTCATACCAGGTCAATGGGAGCCAGAAAACTGCAAAGCCAAAGATTCAGCCTTTCTCAGCAGGCACAGTTTCGAGCGTTATT
GGTAAAGAATATGCTAGGTCGAAGTCATCAGCAAATCAGTTTACTCAGGTATATAAACCGGTGCAGGTGGGGGTAAAGGTTTTGCATGAATCTTCGAGTGAAGGAGATTG
TACGAATTTCACTAGTGAGTCCCACCTGCATCAAGATATGGAAAATTTCCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAGAGGGAAGTGATTCGAGAAGTTCTTG
GTAGGCTTATCCTTTTGAGTTTTCAGAGCATGGAGAATTTGCTTAATCGGTCAACAATTCCAGTGGAGGAAAGACGTGGTTCGGGTAATAAGCCCAATGGCACGTTAACT
TGTTATTCGTTACTTAGTTTGAAATTAATGTTCATTTTTTGTCCATCCAGGAATGGAAATATGGCCTCAAGCAAAAAAGGCTTGGAGTTGACTAACCTGGGGAAGACTAG
ATTCGATCTTCAAAAGGAGATTCTAACTACTTTATTTAATGCTTCTGAGGAACCAGAAGAGGAGTTACCAAGAAGAAGAACAGTATCAAAGATGAAGCGGTCTGGAGCAT
TTGGACAGTTGGTGAGTGAACCATTCAAAGACATGGATGCAGAGGATGAAAAGCATGTGGAACATCAGGCGGAGAATAGTTTGGATGTTGATGATGAAGAAAATACATAC
CAACTTCTTCGTAAGGCTGTTAGGGAGTACCGGGGCACAATGAATGAATATTATGCAGCGGCCATAGATGCATTTGCTAAAGGGGATTATGTTCGAGCAGCCAAACTCAC
AGATGAGGGGCACTTTTTTCGTAAAAAGGCTCAAGAAGCAGATGAACAATCGTGCCAGTTAATTTTTGACCCCAGCAGAAATGCAGATACTGAAGATGATGAAATATTGC
TTGATTTGCACAACCTTGGTGGCAGGGAGGCAGTGAGCGTTTTGAAGTCTCAAATTTCTTCGCTATCTCAAATCCCATCAATCAAACATCTTAAAGTAATAATAGAGGCA
AATGATAAAGATACCTCGAAACGGTCTTGTAGACGTTTGGTAAGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGGAAAGGAAGCATATGGAGTGAACGCATCAAAATTCGGCAAGGAGGACGTGGTGCTCAAGTCTTTGCTTGATGCTTTTGGTTCTACATTTTCACTTGATGAAAT
AGCTTCTGCCTATTTGAAGGCAGACTACAGTGCAGATTTGGCTGCTGAAATCTTGTACCAAACGCAGGGAAGCACCCCTAGCTCCGCATCTAATGGCAAGATAGGAAATG
GAGATAATTTGGGTAAAGGTTCTGAGAATTCATACCAGGTCAATGGGAGCCAGAAAACTGCAAAGCCAAAGATTCAGCCTTTCTCAGCAGGCACAGTTTCGAGCGTTATT
GGTAAAGAATATGCTAGGTCGAAGTCATCAGCAAATCAGTTTACTCAGGTATATAAACCGGTGCAGGTGGGGGTAAAGGTTTTGCATGAATCTTCGAGTGAAGGAGATTG
TACGAATTTCACTAGTGAGTCCCACCTGCATCAAGATATGGAAAATTTCCTCTTCAAAATGCTTGGGGATGGGTTCAGGTTGAAGAGGGAAGTGATTCGAGAAGTTCTTG
GTAGGCTTATCCTTTTGAGTTTTCAGAGCATGGAGAATTTGCTTAATCGGTCAACAATTCCAGTGGAGGAAAGACGTGGTTCGGGTAATAAGCCCAATGGCACGTTAACT
TGTTATTCGTTACTTAGTTTGAAATTAATGTTCATTTTTTGTCCATCCAGGAATGGAAATATGGCCTCAAGCAAAAAAGGCTTGGAGTTGACTAACCTGGGGAAGACTAG
ATTCGATCTTCAAAAGGAGATTCTAACTACTTTATTTAATGCTTCTGAGGAACCAGAAGAGGAGTTACCAAGAAGAAGAACAGTATCAAAGATGAAGCGGTCTGGAGCAT
TTGGACAGTTGGTGAGTGAACCATTCAAAGACATGGATGCAGAGGATGAAAAGCATGTGGAACATCAGGCGGAGAATAGTTTGGATGTTGATGATGAAGAAAATACATAC
CAACTTCTTCGTAAGGCTGTTAGGGAGTACCGGGGCACAATGAATGAATATTATGCAGCGGCCATAGATGCATTTGCTAAAGGGGATTATGTTCGAGCAGCCAAACTCAC
AGATGAGGGGCACTTTTTTCGTAAAAAGGCTCAAGAAGCAGATGAACAATCGTGCCAGTTAATTTTTGACCCCAGCAGAAATGCAGATACTGAAGATGATGAAATATTGC
TTGATTTGCACAACCTTGGTGGCAGGGAGGCAGTGAGCGTTTTGAAGTCTCAAATTTCTTCGCTATCTCAAATCCCATCAATCAAACATCTTAAAGTAATAATAGAGGCA
AATGATAAAGATACCTCGAAACGGTCTTGTAGACGTTTGGTAAGA
Protein sequenceShow/hide protein sequence
MTGKEAYGVNASKFGKEDVVLKSLLDAFGSTFSLDEIASAYLKADYSADLAAEILYQTQGSTPSSASNGKIGNGDNLGKGSENSYQVNGSQKTAKPKIQPFSAGTVSSVI
GKEYARSKSSANQFTQVYKPVQVGVKVLHESSSEGDCTNFTSESHLHQDMENFLFKMLGDGFRLKREVIREVLGRLILLSFQSMENLLNRSTIPVEERRGSGNKPNGTLT
CYSLLSLKLMFIFCPSRNGNMASSKKGLELTNLGKTRFDLQKEILTTLFNASEEPEEELPRRRTVSKMKRSGAFGQLVSEPFKDMDAEDEKHVEHQAENSLDVDDEENTY
QLLRKAVREYRGTMNEYYAAAIDAFAKGDYVRAAKLTDEGHFFRKKAQEADEQSCQLIFDPSRNADTEDDEILLDLHNLGGREAVSVLKSQISSLSQIPSIKHLKVIIEA
NDKDTSKRSCRRLVR