; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010863 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010863
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationscaffold35:2578384..2579130
RNA-Seq ExpressionMS010863
SyntenyMS010863
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134706.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus]1.1e-11985.54Show/hide
Query:  LEQSMAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQS
        L++SMAFEQY+A GWK HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+
Subjt:  LEQSMAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQS

Query:  AEEVEPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS
        AEEVEPE KA+H DI+IPPRPSACGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEED SA+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS
Subjt:  AEEVEPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS

Query:  ENLYSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        +NLYSYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  ENLYSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

XP_004134707.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus]2.1e-11886.12Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAFEQY+A GWK HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        EPE KA+H DI+IPPRPSACGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEED SA+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

XP_008439861.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]1.4e-11786.12Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAF+QY+A GWK HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        E EAKA+HRDI+IPPRPSACGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEE  SA+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

XP_022142014.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia]3.3e-143100Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

XP_038881993.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]8.4e-12388.16Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAFEQY+A GWK HVS TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        EPEAKA+H DI+IPPRPSACGN MLATPSI   QQQLPYRNPYQ+PNHDPLLF NYEED SAAPLLNLARTSFS FHHP+VGMIGD ++ RVFGNS+NLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

TrEMBL top hitse value%identityAlignment
A0A0A0KK60 Rnf51.0e-11886.12Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAFEQY+A GWK HVS   GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        EPE KA+H DI+IPPRPSACGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEED SA+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

A0A1S3AZB8 E3 ubiquitin-protein ligase RMA1H1-like6.7e-11886.12Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAF+QY+A GWK HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        E EAKA+HRDI+IPPRPSACGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEE  SA+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

A0A5A7UGP7 E3 ubiquitin-protein ligase RMA1H1-like6.7e-11886.12Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAF+QY+A GWK HVS   GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        E EAKA+HRDI+IPPRPSACGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEE  SA+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSY +TGSS NRLRRQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

A0A6J1CKD0 E3 ubiquitin-protein ligase RMA1H1-like1.6e-143100Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
        EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY
Subjt:  EPEAKAIHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLY

Query:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
Subjt:  SYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

A0A6J1KVR4 E3 ubiquitin-protein ligase RMA1H1-like isoform X11.4e-11583.74Show/hide
Query:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV
        MA+EQ +A GWK HVS TGGTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV+S SLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEV
Subjt:  MAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEV

Query:  EPEAKAIHRD-IDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENL
         PEA+A+H+D +DIPPRPSACGN +LAT  +   QQQL YRNPYQRPNHDPLLF NYEED S AP LNLARTSFS FHHPVVGMIGD MY RVFGNS+NL
Subjt:  EPEAKAIHRD-IDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENL

Query:  YSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        YSY+NSYH+TGS  NRLRRQEMQA KSLNRISIFL CCVILCVLVF
Subjt:  YSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA11.0e-3841.1Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQS S + +   H QCPVCK+ +SH+T+VPLYGRG+   + E +         +P RP          
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT

Query:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS
        P    +    PY +   R +      S  E     + +++    S+S    PV+ M+G+++ TR+FG    + ++Y ++Y++ G+S  R+RR+ MQA KS
Subjt:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS

Query:  LNRISIFLLCCVILCVLVF
        L RI  F +CCV+LC+L+F
Subjt:  LNRISIFLLCCVILCVLVF

P93030 E3 ubiquitin-protein ligase RMA24.7e-2834.21Show/hide
Query:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC
        G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S           E P+CPVCK+D+S  T+VP+YGRGQ         KA     ++P RP+  
Subjt:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC

Query:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR
           +        + + Q+  YR P                                    PV+G++ +++Y R+FG +S N+  YR+        + R R
Subjt:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR

Query:  RQEMQASKSLNRISIFLLCCVILCVLVF
        R+ MQA +SL+R+ +FLLC + +C+ +F
Subjt:  RQEMQASKSLNRISIFLLCCVILCVLVF

Q5ZIR9 E3 ubiquitin-protein ligase RNF1851.4e-1944.12Show/hide
Query:  SSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPP
        SS G  D  N    F+CNICLD A + V++LCGHL+CWPC+++WL  +           CPVCKA IS   ++PLYGRG + ++ +P  K        PP
Subjt:  SSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPP

Query:  RP
        RP
Subjt:  RP

Q6R567 E3 ubiquitin-protein ligase RMA1H12.4e-4843.35Show/hide
Query:  LEQSMAFEQ----YYAHG-----WKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL--ATDEHPQCPVCKADISHT
        + Q MA EQ    +  H      WK    S      EN  G FDCNICLD  HEPV+TLCGHLYCWPCIYKW++ QS S   +  + PQCPVCKA++S  
Subjt:  LEQSMAFEQ----YYAHG-----WKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL--ATDEHPQCPVCKADISHT

Query:  TMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA--CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGM
        T++PLYGRG  + +   E KA +  I IP RP +  CG H L  P+ D    QL  R  YQ+ +        Y+    ++P+L+    + +   H    M
Subjt:  TMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA--CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGM

Query:  IGDLMYTRVFGNSE-NLYSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
        IG++ Y R+FGNS   +Y+Y NSY++  SSS R+RRQ  QA +SL RI  FL CC + C+++F
Subjt:  IGDLMYTRVFGNSE-NLYSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

Q8GUK7 E3 ubiquitin-protein ligase RMA31.0e-4643.28Show/hide
Query:  KQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AI
        K ++++     + N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHVQ +S++ D+H   CPVCK++I+ T++VPLYGRG S+      +K   A+
Subjt:  KQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AI

Query:  HRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYH
          DI   P PSA  N + +  S++   Q       +    + P  F+  E         +LA     +F +PV+GM GDL+YTR+FG   N  +      
Subjt:  HRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYH

Query:  VTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
             S R+    MQ  KSLNR+SIF LCC+ILC+L+F
Subjt:  VTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein5.9e-2646.55Show/hide
Query:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
        S+G     N    F+CNICLD A +P+VTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VPLYGRG+S+   +P +K+I   +++P R
Subjt:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR

Query:  PSACGNHMLATPSIDH
        PS         P  +H
Subjt:  PSACGNHMLATPSIDH

AT4G03510.1 RING membrane-anchor 17.2e-4041.1Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQS S + +   H QCPVCK+ +SH+T+VPLYGRG+   + E +         +P RP          
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT

Query:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS
        P    +    PY +   R +      S  E     + +++    S+S    PV+ M+G+++ TR+FG    + ++Y ++Y++ G+S  R+RR+ MQA KS
Subjt:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS

Query:  LNRISIFLLCCVILCVLVF
        L RI  F +CCV+LC+L+F
Subjt:  LNRISIFLLCCVILCVLVF

AT4G03510.2 RING membrane-anchor 17.2e-4041.1Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQS S + +   H QCPVCK+ +SH+T+VPLYGRG+   + E +         +P RP          
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT

Query:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS
        P    +    PY +   R +      S  E     + +++    S+S    PV+ M+G+++ TR+FG    + ++Y ++Y++ G+S  R+RR+ MQA KS
Subjt:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS

Query:  LNRISIFLLCCVILCVLVF
        L RI  F +CCV+LC+L+F
Subjt:  LNRISIFLLCCVILCVLVF

AT4G27470.1 RING membrane-anchor 37.2e-4843.28Show/hide
Query:  KQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AI
        K ++++     + N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHVQ +S++ D+H   CPVCK++I+ T++VPLYGRG S+      +K   A+
Subjt:  KQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AI

Query:  HRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYH
          DI   P PSA  N + +  S++   Q       +    + P  F+  E         +LA     +F +PV+GM GDL+YTR+FG   N  +      
Subjt:  HRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYH

Query:  VTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF
             S R+    MQ  KSLNR+SIF LCC+ILC+L+F
Subjt:  VTGSSSNRLRRQEMQASKSLNRISIFLLCCVILCVLVF

AT4G28270.1 RING membrane-anchor 23.4e-2934.21Show/hide
Query:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC
        G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S           E P+CPVCK+D+S  T+VP+YGRGQ         KA     ++P RP+  
Subjt:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC

Query:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR
           +        + + Q+  YR P                                    PV+G++ +++Y R+FG +S N+  YR+        + R R
Subjt:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR

Query:  RQEMQASKSLNRISIFLLCCVILCVLVF
        R+ MQA +SL+R+ +FLLC + +C+ +F
Subjt:  RQEMQASKSLNRISIFLLCCVILCVLVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGAGCAATCCATGGCCTTTGAGCAGTACTATGCGCATGGATGGAAACAACACGTCTCTAGTACAGGGGGAACAGATCGAGAAAACTACAAAGGTTGCTTTGATTGTAA
CATATGCTTAGACTTTGCCCATGAGCCAGTGGTCACTCTGTGCGGCCACTTGTACTGCTGGCCTTGCATCTATAAATGGCTCCACGTCCAGAGTGCCTCTCTTGCCACTG
ATGAGCACCCGCAATGCCCTGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGCCGTGGCCAATCTGCCGAGGAAGTCGAGCCGGAGGCCAAAGCA
ATCCATCGAGACATTGATATACCTCCAAGACCATCAGCTTGTGGTAACCATATGCTTGCTACTCCCAGCATAGACCACCAACAGCAGCAGCTTCCATATCGAAATCCTTA
CCAGCGACCAAACCATGACCCTCTTCTTTTCAGCAATTATGAAGAAGACTCATCAGCAGCTCCATTGCTGAACCTTGCAAGAACTTCATTTAGCAATTTTCACCATCCAG
TGGTCGGGATGATCGGCGACTTGATGTATACGAGGGTGTTCGGGAACTCGGAAAACTTGTATTCTTATCGAAACTCTTACCATGTAACAGGGAGCAGCAGTAACCGGTTG
AGAAGACAGGAAATGCAGGCATCCAAGTCATTGAACAGAATCTCCATATTCCTCCTCTGCTGTGTCATTCTGTGTGTTCTCGTCTTC
mRNA sequenceShow/hide mRNA sequence
CTTGAGCAATCCATGGCCTTTGAGCAGTACTATGCGCATGGATGGAAACAACACGTCTCTAGTACAGGGGGAACAGATCGAGAAAACTACAAAGGTTGCTTTGATTGTAA
CATATGCTTAGACTTTGCCCATGAGCCAGTGGTCACTCTGTGCGGCCACTTGTACTGCTGGCCTTGCATCTATAAATGGCTCCACGTCCAGAGTGCCTCTCTTGCCACTG
ATGAGCACCCGCAATGCCCTGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGCCGTGGCCAATCTGCCGAGGAAGTCGAGCCGGAGGCCAAAGCA
ATCCATCGAGACATTGATATACCTCCAAGACCATCAGCTTGTGGTAACCATATGCTTGCTACTCCCAGCATAGACCACCAACAGCAGCAGCTTCCATATCGAAATCCTTA
CCAGCGACCAAACCATGACCCTCTTCTTTTCAGCAATTATGAAGAAGACTCATCAGCAGCTCCATTGCTGAACCTTGCAAGAACTTCATTTAGCAATTTTCACCATCCAG
TGGTCGGGATGATCGGCGACTTGATGTATACGAGGGTGTTCGGGAACTCGGAAAACTTGTATTCTTATCGAAACTCTTACCATGTAACAGGGAGCAGCAGTAACCGGTTG
AGAAGACAGGAAATGCAGGCATCCAAGTCATTGAACAGAATCTCCATATTCCTCCTCTGCTGTGTCATTCTGTGTGTTCTCGTCTTC
Protein sequenceShow/hide protein sequence
LEQSMAFEQYYAHGWKQHVSSTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKA
IHRDIDIPPRPSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL
RRQEMQASKSLNRISIFLLCCVILCVLVF