CuGenDBv2

Gene ID	MS010866
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein, putative
Genome location	scaffold35:2615833..2616270
RNA-Seq Expression	MS010866
Synteny	MS010866
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008439852.1 PREDICTED: uncharacterized protein LOC103484518 [Cucumis melo]

1.4e-72

95.83

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA
        SSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHGI+TATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKD+EFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        MWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

XP_011658212.1 uncharacterized protein LOC101204514 [Cucumis sativus]

2.3e-72

95.83

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGI+ ATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKD+EFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        MWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

XP_022142070.1 uncharacterized protein LOC111012289 [Momordica charantia]

1.0e-75

100

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Query:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
        SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
Subjt:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM

Query:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
Subjt:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

XP_022926441.1 uncharacterized protein LOC111433593 [Cucurbita moschata]

7.9e-73

95.86

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Query:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
        SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGID ATKLMGSTPHDQLL++TSDSFSGLLLFAIGFLLFMVSFVKD+EFQGFFAKGCTVLHVSM
Subjt:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM

Query:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        AMWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

XP_038881843.1 uncharacterized protein LOC120073208 [Benincasa hispida]

1.6e-73

97.22

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFV+D+EFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        MWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHM7 Uncharacterized protein

1.1e-72

95.83

Show/hide

Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGI+ ATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKD+EFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        MWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

A0A1S3AZP8 uncharacterized protein LOC103484518

6.6e-73

95.83

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA
        SSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHGI+TATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKD+EFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        MWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

A0A5D3CSC4 Uncharacterized protein

6.6e-73

95.83

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Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA
        SSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHGI+TATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMV+FVKD+EFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        MWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  MWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

A0A6J1CJW0 uncharacterized protein LOC111012289

4.9e-76

100

Show/hide

Query:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
        SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
Subjt:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM

Query:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
Subjt:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

A0A6J1EEX8 uncharacterized protein LOC111433593

3.8e-73

95.86

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Query:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
        SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGID ATKLMGSTPHDQLL++TSDSFSGLLLFAIGFLLFMVSFVKD+EFQGFFAKGCTVLHVSM
Subjt:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM

Query:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        AMWRFYFERRVED+AWDWLRQIVGDILLALSWVFFL YSWREKYD
Subjt:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53035.1 unknown protein

5.9e-50

64.83

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Query:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM
        S + S F VIC+LHS++A+TSGTLMMFY ++    G G + A+KL GSTPHD+LLI+ S SFSGLLLFAIG +LFMVSFVKDKEF  FFA G  +L+V M
Subjt:  SSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSM

Query:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        AMWR  FE ++ED+A++W +Q +GDI LA+SWVFFL YSWREKYD
Subjt:  AMWRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

AT3G15358.1 unknown protein

1.6e-47

62.24

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Query:  SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMAM
        +S  F VIC+LHS++A+TSGTLMMFY ++    GHG D A KL GSTPHD+ LI+ S SFSGLLLFAIG +LFMVSFVKD+EF  FFA G  +L++ MA+
Subjt:  SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMAM

Query:  WRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD
        WR  FE ++ED+A++  +Q +GDI LA+SWVFFL Y+WREKYD
Subjt:  WRFYFERRVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

Sequences

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CDS sequence

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TCGTCGTCGTCGTCGTCGACTTTCCCTGTCATCTGCCTTCTTCACTCTGTGGTTGCCATCACGAGCGGGACCCTCATGATGTTCTATATGAAGGAGATTTACACGATTGG
CCATGGGATCGACACCGCCACTAAGTTAATGGGGTCTACGCCGCACGATCAGCTCCTGATTCGGACCTCCGATTCGTTCTCCGGGTTGCTCCTATTCGCAATCGGGTTTC
TCCTGTTCATGGTTTCGTTCGTGAAGGACAAGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACAGTGCTTCACGTCTCAATGGCGATGTGGAGATTCTACTTCGAGCGA
CGAGTGGAGGACATGGCCTGGGATTGGCTGAGGCAGATTGTTGGTGACATTCTTCTCGCCCTCTCTTGGGTCTTCTTTCTTTTTTATTCCTGGAGAGAAAAGTATGAT

mRNA sequence

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Protein sequence

Show/hide protein sequence

SSSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVKDKEFQGFFAKGCTVLHVSMAMWRFYFER
RVEDMAWDWLRQIVGDILLALSWVFFLFYSWREKYD

MS010866 (gene) of Bitter gourd (TR) v1 genome