; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010870 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010870
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S5
Genome locationscaffold35:2636278..2637882
RNA-Seq ExpressionMS010870
SyntenyMS010870
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000851 - Ribosomal protein S5
IPR005324 - Ribosomal protein S5, C-terminal
IPR005712 - Ribosomal protein S5, bacterial-type
IPR013810 - Ribosomal protein S5, N-terminal
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR018192 - Ribosomal protein S5, N-terminal, conserved site
IPR020568 - Ribosomal protein S5 domain 2-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134699.1 30S ribosomal protein S5, chloroplastic [Cucumis sativus]1.1e-14389.9Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE
        MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS + L PI   SSSSIL+  RAKSSDIDTTFFDNV P++D+VYDPPEVPEGFV PPSFDEGP+ETE
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE

Query:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV
        EEIAA YEEIYGPAYSGVSVLGNDI+VMDSKVKK GGFGSKAKKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+AV
Subjt:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV

Query:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI
        QKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Subjt:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI

Query:  PMEELWK
        PMEELWK
Subjt:  PMEELWK

XP_022142374.1 30S ribosomal protein S5, chloroplastic [Momordica charantia]1.2e-15899.67Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        MASSTLVPISSLSLRSSPSHRLPI PLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

XP_022978733.1 30S ribosomal protein S5, chloroplastic-like [Cucurbita maxima]3.1e-14389.14Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        MASS +VPISSLSLRSSPS+ LPIPPLKPFTVLHSA+S+ PISSS IL+  RAK SDIDT FF++V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EI
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        AAAYEE+YGPAYSGVSVLGNDI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+GQVGVGVGKAKEVISAVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        A+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

XP_023544602.1 30S ribosomal protein S5, chloroplastic-like [Cucurbita pepo subsp. pepo]2.8e-14489.14Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        MASS +VPISSLSLRSSPS+ LPIPPLKPFT+LHSA+S+ PISSSSIL+  RAK SDIDTTFF+++ PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EI
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        AAAYEE+YGPAYSGVSVLGNDI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+GQVGVGVGKAKEVISAVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        A+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

XP_038883765.1 30S ribosomal protein S5, chloroplastic [Benincasa hispida]1.5e-14591.53Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSS---ILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE
        MASSTLVPISSLSLRSSPSHRLPIP  KPFTVLHSA+S+ PISSSS   IL+    KSSDIDTTFFDNVTP++DVVYDPPEVPEGFV PPSFDEGP E+E
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSS---ILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE

Query:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV
        +EIAAAYEEIYGPAYSGVSVLGNDI+VMDSKVKKVGGFGSKAKKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+AV
Subjt:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV

Query:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI
        QKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Subjt:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI

Query:  PMEELWK
        PMEELWK
Subjt:  PMEELWK

TrEMBL top hitse value%identityAlignment
A0A0A0KK69 S5 DRBM domain-containing protein5.1e-14489.9Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE
        MASSTLVPISS+SLRSSPSHRL IP  KPF +LHS + L PI   SSSSIL+  RAKSSDIDTTFFDNV P++D+VYDPPEVPEGFV PPSFDEGP+ETE
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE

Query:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV
        EEIAA YEEIYGPAYSGVSVLGNDI+VMDSKVKK GGFGSKAKKDK RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+AV
Subjt:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV

Query:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI
        QKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Subjt:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI

Query:  PMEELWK
        PMEELWK
Subjt:  PMEELWK

A0A5D3CMJ7 30S ribosomal protein S51.6e-14288.93Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLH---SALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE
        MASSTLVPISS+SLRSSPSHRL IP  KPF +LH   S LS++  SSSSIL+  RAKSSDIDTTFFDNV P++D+ +DPPEVPEGFV PPSFDEGP+ETE
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLH---SALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETE

Query:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV
        EEIAAAYEEIYGPAYSGVSVLGNDI+VMDSKVKK GGFGSKAKK+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI+AV
Subjt:  EEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAV

Query:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI
        QKSAVNARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AVQKMKQFR+VAQERGI
Subjt:  QKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGI

Query:  PMEELWK
        PMEELWK
Subjt:  PMEELWK

A0A6J1CLD7 30S ribosomal protein S5, chloroplastic5.6e-15999.67Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        MASSTLVPISSLSLRSSPSHRLPI PLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

A0A6J1EDM2 30S ribosomal protein S5, chloroplastic-like2.5e-14388.49Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        MASS +VPISSLSLRSSPS+ LPIPPLKPFTVLHS++S+ PISSS IL+  RAK SD++TTFF++V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EI
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        AAAYEE+YGPAYSGVSVLGNDI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+GQVGVGVGKAKEVISAVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        A+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

A0A6J1IU44 30S ribosomal protein S5, chloroplastic-like1.5e-14389.14Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        MASS +VPISSLSLRSSPS+ LPIPPLKPFTVLHSA+S+ PISSS IL+  RAK SDIDT FF++V PE+DVVYDPPEVPEGFVAPPSFDEGPLE+E+EI
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        AAAYEE+YGPAYSGVSVLGNDI+VMDSK+KKVGGFGSKA+K+K RDGF+ERVVQVRRVTKVVKGGKQLHFRAIVVVGDK+GQVGVGVGKAKEVISAVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        A+NARRNIVTVPMTKYLTFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATV AV KMKQFR+VA+ERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

SwissProt top hitse value%identityAlignment
B2ITN9 30S ribosomal protein S55.6e-4759.04Show/hide
Query:  KAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA
        +AKK++    ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGVGKA +VI AV+K   + +++++ +P+TK  + PH  DG  G AKV++RPA
Subjt:  KAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA

Query:  SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW
        +PGTGVIAGGAVR VLE+AGV N L KQLGSNN LNNARA V A+  ++   EVA++RGIP++ L+
Subjt:  SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW

P51298 30S ribosomal protein S5, chloroplastic1.1e-4759.88Show/hide
Query:  KAKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRP
        K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+VVG++QGQVGVGVGKA +VI AV+K   +A++++VTVP+TK  + PH  +G  GAA+V+LRP
Subjt:  KAKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRP

Query:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW
        ++PG+GVIAGG+VR VLE++GV+N L KQLGSNN LNNARA +  + +++ F E A++RG+P+E L+
Subjt:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW

P93014 30S ribosomal protein S5, chloroplastic3.9e-10972.04Show/hide
Query:  SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPE--DDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        +S L  +SSLSL +  S  +     K      S L+       S L  ++A S+D +T FF++ TPE   +VV+DPP  PEGFV+PP FDEG  ETEEEI
Subjt:  SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPE--DDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        A A+EE+YGPAYSG S+LG DI+VMDSK KK  G G K KKDK+RDGFEERVVQVRRVTKVVKGGKQL FRAIVVVGDKQG VGVG  KAKEV++AVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        A++ARRNIV VPMTKY TFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+AAVQ+M+QFR+VAQERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK

Q1XDJ0 30S ribosomal protein S5, chloroplastic5.0e-4859.88Show/hide
Query:  KAKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRP
        K  K K +D G+EERVVQV+RVTKVVKGGK+L FR I+V+G++QGQVGVGVGKA +VI AV+K   +A++++VTVP+TK  + PH  +G  GAAKV+LRP
Subjt:  KAKKDKLRD-GFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRP

Query:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW
        ++PG+GVIAGG+VR VLE++GV+N L KQLGSNN LNNARA +  + +++ F E A++RG+P+E L+
Subjt:  ASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELW

Q9ST69 30S ribosomal protein S5, chloroplastic2.9e-10466.45Show/hide
Query:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIR---AKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPL
        MA++     S+ SL ++   R+P+ P    T+L  + S  P+    SS+   P      K  DID TFF+   P++++ +DPPE PEG++ P + DE P 
Subjt:  MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPI---SSSSILAPIR---AKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPL

Query:  ETEEEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI
        E+EEEIA AYEE+YG AYSG S+LGND++ MDSK+KK  GFGSK+KK+K+RDGFEE VVQVRRVTKVVKGGK + FRAIVVVGDK+GQVGVGVGKAKEV+
Subjt:  ETEEEIAAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVI

Query:  SAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQE
        SAVQK+AV+ARRNI+TVPMTKYLTFPHR++ DYGAA+VMLRPA+PGTGVIAGGAVR VLEMAGVENALGKQLGSNNALNNARAT+ AVQ M+QF +VA++
Subjt:  SAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQE

Query:  RGIPMEELWK
        RGIPMEELWK
Subjt:  RGIPMEELWK

Arabidopsis top hitse value%identityAlignment
AT1G58380.1 Ribosomal protein S5 family protein2.7e-1231.76Show/hide
Query:  EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGT
        ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++V V        + K  T P +  G  G+  V + PA  G+
Subjt:  EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGT

Query:  GVIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVAAVQKMKQF
        G++A    + VL+ AG+++      GS   L N  +AT   +QK   F
Subjt:  GVIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVAAVQKMKQF

AT1G58983.1 Ribosomal protein S5 family protein2.7e-1231.76Show/hide
Query:  EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGT
        ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++V V        + K  T P +  G  G+  V + PA  G+
Subjt:  EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGT

Query:  GVIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVAAVQKMKQF
        G++A    + VL+ AG+++      GS   L N  +AT   +QK   F
Subjt:  GVIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVAAVQKMKQF

AT1G59359.1 Ribosomal protein S5 family protein2.7e-1231.76Show/hide
Query:  EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGT
        ++ V+++  V K  + G++  F+A VVVGD  G VG+GV  +KEV +A++ + + A+ ++V V        + K  T P +  G  G+  V + PA  G+
Subjt:  EERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTV-------PMTKYLTFPHRSDGDYGAAKVMLRPASPGT

Query:  GVIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVAAVQKMKQF
        G++A    + VL+ AG+++      GS   L N  +AT   +QK   F
Subjt:  GVIAGGAVRIVLEMAGVENALGKQLGSNNALNN-ARATVAAVQKMKQF

AT1G64880.1 Ribosomal protein S5 family protein1.3e-1430.82Show/hide
Query:  KAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA
        K ++   R G++  V+ V++V KV KGG+   + A++V G+ +G +G    KA+   SA+QK+     +N+  V   +  T  H     Y   K+ L PA
Subjt:  KAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPA

Query:  SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERG
           TG+ AG  V+ +L +AG +N   K +GS N+ N  +A + A+  ++  ++V ++ G
Subjt:  SPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERG

AT2G33800.1 Ribosomal protein S5 family protein2.8e-11072.04Show/hide
Query:  SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPE--DDVVYDPPEVPEGFVAPPSFDEGPLETEEEI
        +S L  +SSLSL +  S  +     K      S L+       S L  ++A S+D +T FF++ TPE   +VV+DPP  PEGFV+PP FDEG  ETEEEI
Subjt:  SSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPE--DDVVYDPPEVPEGFVAPPSFDEGPLETEEEI

Query:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS
        A A+EE+YGPAYSG S+LG DI+VMDSK KK  G G K KKDK+RDGFEERVVQVRRVTKVVKGGKQL FRAIVVVGDKQG VGVG  KAKEV++AVQKS
Subjt:  AAAYEEIYGPAYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKS

Query:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME
        A++ARRNIV VPMTKY TFPHRS+GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+AAVQ+M+QFR+VAQERGIPME
Subjt:  AVNARRNIVTVPMTKYLTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPME

Query:  ELWK
        ELWK
Subjt:  ELWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCAACTCTCGTTCCGATTTCCTCTCTTTCATTACGCTCTTCTCCCTCCCACCGCCTCCCAATTCCGCCATTAAAGCCTTTCACCGTCCTCCACTCCGCCCT
ATCCCTAGCCCCAATTTCCTCCTCCTCAATTCTCGCTCCAATTCGAGCCAAATCCTCTGACATTGACACCACCTTCTTCGACAACGTCACTCCCGAAGACGACGTCGTTT
ACGACCCCCCGGAAGTCCCCGAAGGCTTCGTCGCCCCTCCATCCTTCGACGAGGGTCCGCTGGAGACCGAGGAAGAAATCGCCGCCGCTTACGAGGAGATCTACGGCCCC
GCTTACAGCGGAGTCTCTGTTCTGGGAAATGACATTCACGTGATGGATTCTAAGGTGAAGAAAGTGGGCGGATTCGGCTCCAAGGCCAAGAAGGACAAGCTGCGGGATGG
ATTCGAAGAGCGGGTCGTGCAAGTTCGGAGGGTTACGAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGAGCAATTGTTGTTGTTGGAGACAAACAGGGCCAAGTCG
GCGTTGGTGTTGGTAAGGCTAAGGAGGTCATTTCCGCTGTCCAGAAATCAGCCGTCAATGCTCGCCGGAATATCGTCACCGTCCCCATGACCAAGTACCTGACCTTTCCT
CACAGGTCGGATGGAGACTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTGCTCGAAATGGCTGG
GGTTGAGAACGCTTTAGGGAAGCAACTCGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGCTGCCGTGCAGAAGATGAAACAGTTCCGGGAAGTTGCGCAGG
AGCGAGGTATCCCCATGGAAGAGCTGTGGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCAACTCTCGTTCCGATTTCCTCTCTTTCATTACGCTCTTCTCCCTCCCACCGCCTCCCAATTCCGCCATTAAAGCCTTTCACCGTCCTCCACTCCGCCCT
ATCCCTAGCCCCAATTTCCTCCTCCTCAATTCTCGCTCCAATTCGAGCCAAATCCTCTGACATTGACACCACCTTCTTCGACAACGTCACTCCCGAAGACGACGTCGTTT
ACGACCCCCCGGAAGTCCCCGAAGGCTTCGTCGCCCCTCCATCCTTCGACGAGGGTCCGCTGGAGACCGAGGAAGAAATCGCCGCCGCTTACGAGGAGATCTACGGCCCC
GCTTACAGCGGAGTCTCTGTTCTGGGAAATGACATTCACGTGATGGATTCTAAGGTGAAGAAAGTGGGCGGATTCGGCTCCAAGGCCAAGAAGGACAAGCTGCGGGATGG
ATTCGAAGAGCGGGTCGTGCAAGTTCGGAGGGTTACGAAAGTGGTTAAAGGTGGGAAACAGTTGCATTTTAGAGCAATTGTTGTTGTTGGAGACAAACAGGGCCAAGTCG
GCGTTGGTGTTGGTAAGGCTAAGGAGGTCATTTCCGCTGTCCAGAAATCAGCCGTCAATGCTCGCCGGAATATCGTCACCGTCCCCATGACCAAGTACCTGACCTTTCCT
CACAGGTCGGATGGAGACTATGGAGCAGCAAAAGTAATGCTGAGACCTGCCTCTCCCGGTACTGGTGTGATTGCTGGTGGAGCAGTGAGAATCGTGCTCGAAATGGCTGG
GGTTGAGAACGCTTTAGGGAAGCAACTCGGAAGTAACAATGCCCTCAACAATGCCAGAGCAACGGTGGCTGCCGTGCAGAAGATGAAACAGTTCCGGGAAGTTGCGCAGG
AGCGAGGTATCCCCATGGAAGAGCTGTGGAAG
Protein sequenceShow/hide protein sequence
MASSTLVPISSLSLRSSPSHRLPIPPLKPFTVLHSALSLAPISSSSILAPIRAKSSDIDTTFFDNVTPEDDVVYDPPEVPEGFVAPPSFDEGPLETEEEIAAAYEEIYGP
AYSGVSVLGNDIHVMDSKVKKVGGFGSKAKKDKLRDGFEERVVQVRRVTKVVKGGKQLHFRAIVVVGDKQGQVGVGVGKAKEVISAVQKSAVNARRNIVTVPMTKYLTFP
HRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVAAVQKMKQFREVAQERGIPMEELWK