; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010873 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010873
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiondof zinc finger protein DOF1.4-like isoform X1
Genome locationscaffold35:2657989..2658402
RNA-Seq ExpressionMS010873
SyntenyMS010873
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604456.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3867.57Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAP----LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSS-STVNAA
        MASASRIMD     QQQ Q     P    LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCR+ NKRLK+SSSSS S+VNA 
Subjt:  MASASRIMDNNNLVQQQPQSSSAAP----LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSS-STVNAA

Query:  TAVKSTPANSTASQNPHPQNS------TNPMFYGVNNTDPSGLNLQFS
            STP       N    NS      ++PMF+GV+NT+PS LNLQFS
Subjt:  TAVKSTPANSTASQNPHPQNS------TNPMFYGVNNTDPSGLNLQFS

XP_022142193.1 dof zinc finger protein DOF1.4-like isoform X1 [Momordica charantia]1.0e-6999.27Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS
        MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAA AVKS
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS

Query:  TPANSTASQNPHPQNSTNPMFYGVNNTDPSGLNLQFS
        TPANSTASQNPHPQNSTNPMFYGVNNTDPSGLNLQFS
Subjt:  TPANSTASQNPHPQNSTNPMFYGVNNTDPSGLNLQFS

XP_022142194.1 dof zinc finger protein DOF3.1-like isoform X2 [Momordica charantia]2.3e-6199.19Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS
        MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAA AVKS
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS

Query:  TPANSTASQNPHPQNSTNPMFYG
        TPANSTASQNPHPQNSTNPMFYG
Subjt:  TPANSTASQNPHPQNSTNPMFYG

XP_022978746.1 dof zinc finger protein DOF1.4 [Cucurbita maxima]4.9e-4069.01Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS
        MASASRIMD     QQQ     A  LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCR+ NKRLK+SSSS S+VNA     S
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS

Query:  TPANSTASQNPHPQNSTN-----PMFYGVNNTDPSGLNLQFS
        TP       N    ++TN     PMF+GV+NT+PS LNLQFS
Subjt:  TPANSTASQNPHPQNSTN-----PMFYGVNNTDPSGLNLQFS

XP_023544408.1 dof zinc finger protein DOF1.4 [Cucurbita pepo subsp. pepo]5.4e-3968.75Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSS-STVNAATAVK
        MASASRIMD     QQQ +   A  LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCR+ NKRLK+SSSSS S+VNA     
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSS-STVNAATAVK

Query:  STPANSTASQNPHPQNS------TNPMFYGVNNTDPSGLNLQFS
        STP       N    NS      ++PMF+GV+NT+PS LNLQFS
Subjt:  STPANSTASQNPHPQNS------TNPMFYGVNNTDPSGLNLQFS

TrEMBL top hitse value%identityAlignment
A0A067GDE2 Dof-type domain-containing protein5.1e-3557.14Show/hide
Query:  IMASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK
        +MAS  R+MD     Q+ PQ     PLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCR+ NKR+K  +S++++++      
Subjt:  IMASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK

Query:  STPANSTASQNPHPQ---------NSTNPMFYGVNNTDPSGLNLQFS
        S P+ +    NPH Q         N  NP+F+G+ +T+PS +NL FS
Subjt:  STPANSTASQNPHPQ---------NSTNPMFYGVNNTDPSGLNLQFS

A0A6J1CKV9 dof zinc finger protein DOF3.1-like isoform X21.1e-6199.19Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS
        MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAA AVKS
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS

Query:  TPANSTASQNPHPQNSTNPMFYG
        TPANSTASQNPHPQNSTNPMFYG
Subjt:  TPANSTASQNPHPQNSTNPMFYG

A0A6J1CMN2 dof zinc finger protein DOF1.4-like isoform X14.9e-7099.27Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS
        MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAA AVKS
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS

Query:  TPANSTASQNPHPQNSTNPMFYGVNNTDPSGLNLQFS
        TPANSTASQNPHPQNSTNPMFYGVNNTDPSGLNLQFS
Subjt:  TPANSTASQNPHPQNSTNPMFYGVNNTDPSGLNLQFS

A0A6J1EGC8 dof zinc finger protein DOF1.48.5e-3866.89Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAP----LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSS-STVNAA
        MASASRIMD     QQQ Q     P    LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCR+ NKRLK+SSSSS S+VNA 
Subjt:  MASASRIMDNNNLVQQQPQSSSAAP----LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSS-STVNAA

Query:  TAVKSTPANSTASQNPHPQNS------TNPMFYGVNNTDPSGLNLQFS
            STP       N    NS      ++ MF+GV+NT+PS LNLQFS
Subjt:  TAVKSTPANSTASQNPHPQNS------TNPMFYGVNNTDPSGLNLQFS

A0A6J1INW3 dof zinc finger protein DOF1.42.4e-4069.01Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS
        MASASRIMD     QQQ     A  LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCR+ NKRLK+SSSS S+VNA     S
Subjt:  MASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKS

Query:  TPANSTASQNPHPQNSTN-----PMFYGVNNTDPSGLNLQFS
        TP       N    ++TN     PMF+GV+NT+PS LNLQFS
Subjt:  TPANSTASQNPHPQNSTN-----PMFYGVNNTDPSGLNLQFS

SwissProt top hitse value%identityAlignment
O82155 Dof zinc finger protein DOF1.77.2e-2652.46Show/hide
Query:  QQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQNPHPQ
        Q QP+      LKCPRCDS NTKFCYYNNY+LSQPRHFCK C+RYWT+GG LRN+PVGGG R++NKR  + SS SS +   T  +    + + S+    +
Subjt:  QQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQNPHPQ

Query:  NS---TNP--MFYGVNNTDPSG
         S    NP  M YG+   DP+G
Subjt:  NS---TNP--MFYGVNNTDPSG

Q8L9V6 Dof zinc finger protein DOF1.11.2e-2857.89Show/hide
Query:  AAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSS--SSSSTVNAATAVKSTPANSTASQNPHPQNSTNPM
        A PLKCPRCDSSNTKFCYYNNY+L+QPRHFCK C+RYWT+GG LRNVPVGGGCRRNNK+ K  +  SSSS+   +++V +   +S   +  H Q   +P 
Subjt:  AAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSS--SSSSTVNAATAVKSTPANSTASQNPHPQNSTNPM

Query:  FYGVNNTDPSGLNL
         Y +      GLNL
Subjt:  FYGVNNTDPSGLNL

Q94AR6 Dof zinc finger protein DOF3.19.0e-2951.85Show/hide
Query:  QQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQ-----
        QQQPQ +    LKCPRCDS NTKFCYYNNY+LSQPRHFCK+C+RYWT+GG LRNVPVGGG R+N  +  TSSSSS+         S+P+NS+ ++     
Subjt:  QQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQ-----

Query:  --NPHPQNSTNP------MFYG--VNNTDPSGLNL
          +P P+NS  P      M YG  + + D  G+ +
Subjt:  --NPHPQNSTNP------MFYG--VNNTDPSGLNL

Q9FZA4 Dof zinc finger protein DOF1.44.8e-3056.06Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAP-LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK
        M S + I+ +++  QQQ Q     P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGG  R+ NKR+K  S++++T    TA  
Subjt:  MASASRIMDNNNLVQQQPQSSSAAP-LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK

Query:  STPANSTASQNPH-----PQNSTNPMFYGVNN
         +  NS++  NPH        + +P+FYG+++
Subjt:  STPANSTASQNPH-----PQNSTNPMFYGVNN

Q9LSL6 Dof zinc finger protein DOF5.75.5e-2662.79Show/hide
Query:  QQPQSSSAAP----LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATA
        ++P SSS A     LKCPRC+S NTKFCYYNNYSLSQPRHFCK+C+RYWTRGG LRNVP+GGGCR+  K +K +SS ++  +++++
Subjt:  QQPQSSSAAP----LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATA

Arabidopsis top hitse value%identityAlignment
AT1G07640.1 Dof-type zinc finger DNA-binding family protein8.4e-3057.89Show/hide
Query:  AAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSS--SSSSTVNAATAVKSTPANSTASQNPHPQNSTNPM
        A PLKCPRCDSSNTKFCYYNNY+L+QPRHFCK C+RYWT+GG LRNVPVGGGCRRNNK+ K  +  SSSS+   +++V +   +S   +  H Q   +P 
Subjt:  AAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSS--SSSSTVNAATAVKSTPANSTASQNPHPQNSTNPM

Query:  FYGVNNTDPSGLNL
         Y +      GLNL
Subjt:  FYGVNNTDPSGLNL

AT1G07640.2 Dof-type zinc finger DNA-binding family protein8.4e-3057.89Show/hide
Query:  AAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSS--SSSSTVNAATAVKSTPANSTASQNPHPQNSTNPM
        A PLKCPRCDSSNTKFCYYNNY+L+QPRHFCK C+RYWT+GG LRNVPVGGGCRRNNK+ K  +  SSSS+   +++V +   +S   +  H Q   +P 
Subjt:  AAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSS--SSSSTVNAATAVKSTPANSTASQNPHPQNSTNPM

Query:  FYGVNNTDPSGLNL
         Y +      GLNL
Subjt:  FYGVNNTDPSGLNL

AT1G28310.1 Dof-type zinc finger DNA-binding family protein3.4e-3156.06Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAP-LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK
        M S + I+ +++  QQQ Q     P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGG  R+ NKR+K  S++++T    TA  
Subjt:  MASASRIMDNNNLVQQQPQSSSAAP-LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK

Query:  STPANSTASQNPH-----PQNSTNPMFYGVNN
         +  NS++  NPH        + +P+FYG+++
Subjt:  STPANSTASQNPH-----PQNSTNPMFYGVNN

AT1G28310.2 Dof-type zinc finger DNA-binding family protein3.4e-3156.06Show/hide
Query:  MASASRIMDNNNLVQQQPQSSSAAP-LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK
        M S + I+ +++  QQQ Q     P LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGG  R+ NKR+K  S++++T    TA  
Subjt:  MASASRIMDNNNLVQQQPQSSSAAP-LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVK

Query:  STPANSTASQNPH-----PQNSTNPMFYGVNN
         +  NS++  NPH        + +P+FYG+++
Subjt:  STPANSTASQNPH-----PQNSTNPMFYGVNN

AT3G21270.1 DOF zinc finger protein 26.4e-3051.85Show/hide
Query:  QQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQ-----
        QQQPQ +    LKCPRCDS NTKFCYYNNY+LSQPRHFCK+C+RYWT+GG LRNVPVGGG R+N  +  TSSSSS+         S+P+NS+ ++     
Subjt:  QQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQ-----

Query:  --NPHPQNSTNP------MFYG--VNNTDPSGLNL
          +P P+NS  P      M YG  + + D  G+ +
Subjt:  --NPHPQNSTNP------MFYG--VNNTDPSGLNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAATGGCTTCAGCTTCTAGAATTATGGACAATAATAATCTTGTTCAACAGCAGCCTCAATCATCATCAGCTGCGCCCTTGAAGTGCCCTCGCTGTGATTCTTCCAACAC
AAAGTTTTGTTATTACAACAATTACAGCCTCTCCCAGCCCAGGCACTTCTGCAAGGCATGTAAACGCTACTGGACCAGAGGCGGAACCCTAAGAAATGTCCCCGTCGGCG
GCGGCTGCCGGAGAAACAACAAGCGCCTCAAGACCTCTTCTTCTTCCTCTTCTACAGTCAACGCTGCTACTGCCGTTAAGTCAACTCCAGCTAATTCTACTGCAAGTCAA
AACCCTCATCCCCAAAATAGCACCAACCCAATGTTCTATGGGGTAAATAATACTGACCCATCTGGCCTAAATCTTCAGTTTTCA
mRNA sequenceShow/hide mRNA sequence
ATAATGGCTTCAGCTTCTAGAATTATGGACAATAATAATCTTGTTCAACAGCAGCCTCAATCATCATCAGCTGCGCCCTTGAAGTGCCCTCGCTGTGATTCTTCCAACAC
AAAGTTTTGTTATTACAACAATTACAGCCTCTCCCAGCCCAGGCACTTCTGCAAGGCATGTAAACGCTACTGGACCAGAGGCGGAACCCTAAGAAATGTCCCCGTCGGCG
GCGGCTGCCGGAGAAACAACAAGCGCCTCAAGACCTCTTCTTCTTCCTCTTCTACAGTCAACGCTGCTACTGCCGTTAAGTCAACTCCAGCTAATTCTACTGCAAGTCAA
AACCCTCATCCCCAAAATAGCACCAACCCAATGTTCTATGGGGTAAATAATACTGACCCATCTGGCCTAAATCTTCAGTTTTCA
Protein sequenceShow/hide protein sequence
IMASASRIMDNNNLVQQQPQSSSAAPLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRRNNKRLKTSSSSSSTVNAATAVKSTPANSTASQ
NPHPQNSTNPMFYGVNNTDPSGLNLQFS