; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010885 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010885
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationscaffold35:2732979..2733375
RNA-Seq ExpressionMS010885
SyntenyMS010885
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142284.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]3.4e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
XP_022142285.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]1.7e-40100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
XP_022142286.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]1.7e-40100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
XP_022142288.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Momordica charantia]3.4e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
XP_022142289.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X5 [Momordica charantia]1.7e-40100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
TrEMBL top hitse value%identityAlignment
A0A6J1CKI3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X28.3e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
A0A6J1CL53 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.7e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
A0A6J1CL58 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X58.3e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
A0A6J1CMC1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X38.3e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
A0A6J1CMX8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X41.7e-41100Show/hide
Query:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.9e-1048.94Show/hide
Query:  MSTAAAMA-ARSALRSTVARAAISGRLTGGAKVKSARSPF-GMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGW
        M+T+A ++ ARS LR+  +R+A +      ++ KSA   F    +++PL      LR+PVE+S CVESLLPYHSATASAL+TS LS+S ++YGW
Subjt:  MSTAAAMA-ARSALRSTVARAAISGRLTGGAKVKSARSPF-GMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGW
Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein3.3e-1859.14Show/hide
Query:  AARSALRSTVARAAISG-RLTGGAK--VKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
        AARS  RS  +RA+ +  R + G K    SAR+ F MPKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G+
Subjt:  AARSALRSTVARAAISG-RLTGGAK--VKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
AT1G28395.2 unknown protein3.3e-1859.14Show/hide
Query:  AARSALRSTVARAAISG-RLTGGAK--VKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
        AARS  RS  +RA+ +  R + G K    SAR+ F MPKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G+
Subjt:  AARSALRSTVARAAISG-RLTGGAK--VKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
AT1G28395.3 unknown protein3.3e-1859.14Show/hide
Query:  AARSALRSTVARAAISG-RLTGGAK--VKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
        AARS  RS  +RA+ +  R + G K    SAR+ F MPKQ+PL  ++RI RSPVE+SCCVE++LPYH+ATASALL SMLSVSRR  GW  +G+
Subjt:  AARSALRSTVARAAISG-RLTGGAK--VKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGI
AT2G33847.1 unknown protein6.7e-1963.95Show/hide
Query:  AARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS  RS V RAA++   +      SARS F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
AT2G33847.2 unknown protein1.4e-1962.92Show/hide
Query:  AARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS  RS V RAA++   +      SARS F +PKQ+PL  SHRI RSPVE+SCCVE++LPYH+ATASALL SMLSVS RS  WT +G
Subjt:  AARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCAGATCAACCGTAGCGCGGGCCGCTATCTCCGGGAGACTTACCGGCGGTGCCAAAGTGAAATCAGCGCGTTC
TCCGTTCGGCATGCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CCGCATCTGCATTGCTTACGTCTATGCTTTCCGTCTCTCGTCGGAGTTACGGTTGGACCCCTGAAGGTATTTCCTTGCTCCTATCGTGGAATTGTTCTCTC
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCGCCGCTGCCATGGCTGCTAGGTCAGCCCTCAGATCAACCGTAGCGCGGGCCGCTATCTCCGGGAGACTTACCGGCGGTGCCAAAGTGAAATCAGCGCGTTC
TCCGTTCGGCATGCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAAATGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CCGCATCTGCATTGCTTACGTCTATGCTTTCCGTCTCTCGTCGGAGTTACGGTTGGACCCCTGAAGGTATTTCCTTGCTCCTATCGTGGAATTGTTCTCTC
Protein sequenceShow/hide protein sequence
MSTAAAMAARSALRSTVARAAISGRLTGGAKVKSARSPFGMPKQNPLSQSHRILRSPVEMSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGISLLLSWNCSL