; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010886 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010886
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:2735615..2736178
RNA-Seq ExpressionMS010886
SyntenyMS010886
Gene Ontology termsNA
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026557.1 hypothetical protein SDJN02_10559 [Cucurbita argyrosperma subsp. argyrosperma]5.0e-4270.37Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL
        DR+++ GWPLGLEVMNTR+RM   +RLP        HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWL  P  TD +  VSVN+  L
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL

Query:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        D  KT   EISGRICIPI+IGI+LKMIR+ RNSRS
Subjt:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

XP_022142254.1 uncharacterized protein LOC111012415 [Momordica charantia]9.1e-68100Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVS
        DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVS
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVS

Query:  KTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        KTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
Subjt:  KTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

XP_022926836.1 uncharacterized protein LOC111433832 [Cucurbita moschata]5.0e-4270.37Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL
        DR+++ GWPLGLEVMNTR+RM   +RLP        HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWL  P  TD +  VSVN+  L
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL

Query:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        D  KT   EISGRICIPI+IGI+LKMIR+ RNSRS
Subjt:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

XP_023517383.1 uncharacterized protein LOC111781162 [Cucurbita pepo subsp. pepo]5.0e-4271.11Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL
        D++IL GWPLGLEVMNTR+RM   +RLP        HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWL  P  TD +  VSVN+  L
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL

Query:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        D  KT   EISGRICIPI+IGI+LKMIR+ RNSRS
Subjt:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

XP_038883341.1 uncharacterized protein At3g17950-like [Benincasa hispida]2.3e-4271.63Show/hide
Query:  REILGGWPLGLEVMNTRLR-MTQP--ERLP-----TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVN
        ++IL GWPLGL+VMNTRLR M  P  ERLP     +  +LHIPS+SFSSLSSSELDT+STASFFQDHSVSLGRLIG++PADKTWL FP  T+ ++SVSVN
Subjt:  REILGGWPLGLEVMNTRLR-MTQP--ERLP-----TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVN

Query:  AGGLDVSKTNG--DEISGRICIPIVIGIVLKMIRNWRNSRS
        + GLD SKTN   +EISGRICIPIVIG++LKMIR+ RNSRS
Subjt:  AGGLDVSKTNG--DEISGRICIPIVIGIVLKMIRNWRNSRS

TrEMBL top hitse value%identityAlignment
A0A0A0KNE6 Uncharacterized protein3.2e-3462.24Show/hide
Query:  REILGGWPLGLEVMNTRLRM-------TQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNA
        +++L GWPLGL+VMN+ LR+       T P   P+  NL IPS SFSSLSSSELDT+STASFFQD SVSLGRLIG++PADKTWL FP  T+  +SVS N+
Subjt:  REILGGWPLGLEVMNTRLRM-------TQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNA

Query:  GG--LDVSKTNG----DEISGRICIPIVIGIVLKMIRNWRNSR
         G  +D SKT      + ISGRICIPIVIG++LKMIR+ RNSR
Subjt:  GG--LDVSKTNG----DEISGRICIPIVIGIVLKMIRNWRNSR

A0A1S3B0C9 uncharacterized protein LOC1034845007.8e-3362.41Show/hide
Query:  REILGGWPLGLEVMNTRLRM---TQPERLPTI---ANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVN-A
        +++L GWPLGL+VMNT LR+   +   RLP+     ++ IPS SFSSLSSSELDT+STASFFQDHSVSLGRLIG++PADK WL  P  T+  +SV+ N A
Subjt:  REILGGWPLGLEVMNTRLRM---TQPERLPTI---ANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVN-A

Query:  GGLDVSKTNG--DEISGR-ICIPIVIGIVLKMIRNWRNSRS
        G +D SKT     EISGR ICIPIVIG++LKMIR+ RNS S
Subjt:  GGLDVSKTNG--DEISGR-ICIPIVIGIVLKMIRNWRNSRS

A0A6J1CL22 uncharacterized protein LOC1110124154.4e-68100Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVS
        DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVS
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVS

Query:  KTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        KTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
Subjt:  KTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

A0A6J1EFZ8 uncharacterized protein LOC1114338322.4e-4270.37Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL
        DR+++ GWPLGLEVMNTR+RM   +RLP        HIPS SFSSLSSSELDT+STASFFQDHSVSLGRLIGIRP DKTWL  P  TD +  VSVN+  L
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL

Query:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        D  KT   EISGRICIPI+IGI+LKMIR+ RNSRS
Subjt:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

A0A6J1KXT6 uncharacterized protein LOC1114973164.6e-4168.89Show/hide
Query:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL
        D++IL GWPLGLEVMNTR+RM   +RLP        HIPS SFSSLSSSEL+T+STASFFQDHSVSLGRLIGIRP DKTWL  P  TD +  VS N+  L
Subjt:  DREILGGWPLGLEVMNTRLRMTQPERLP---TIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGL

Query:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS
        D  KT   EISGRICIPI+IGI+LKMI++ RNSRS
Subjt:  DVSKTNGDEISGRICIPIVIGIVLKMIRNWRNSRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17950.1 unknown protein1.5e-0459.46Show/hide
Query:  HIPSM-SFSSLSSSELDTVSTASFFQDHSVSLGRLIG
        H+PS  + SS+SSS+LDT ST SFF D S++LG L+G
Subjt:  HIPSM-SFSSLSSSELDTVSTASFFQDHSVSLGRLIG

AT5G02440.1 unknown protein4.0e-0540.54Show/hide
Query:  GWPLGLEVMNTRL----------RMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGI
        GWPLGL  +N R+             +     +I+   + S S SS SSS+LD+ S  SFF+D S +LG LIGI
Subjt:  GWPLGLEVMNTRL----------RMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCGAGAGATCCTCGGCGGATGGCCGCTTGGTCTCGAGGTTATGAACACAAGGCTTCGAATGACGCAGCCGGAGAGGTTACCGACGATAGCTAATTTGCACATTCCTTC
CATGAGTTTCTCCTCTTTGTCGTCCTCCGAGCTCGACACTGTGTCGACGGCGTCGTTCTTCCAAGACCACAGCGTCTCACTCGGCCGGCTCATCGGAATAAGGCCGGCCG
ACAAGACGTGGTTGTGCTTTCCGACTGCCACCGACGGAAGTGAGAGTGTATCGGTCAACGCCGGCGGCTTAGATGTGTCGAAAACGAACGGCGATGAAATATCGGGACGA
ATCTGCATTCCGATTGTGATCGGTATCGTCTTGAAGATGATCAGAAATTGGAGGAATTCGAGGAGT
mRNA sequenceShow/hide mRNA sequence
GATCGAGAGATCCTCGGCGGATGGCCGCTTGGTCTCGAGGTTATGAACACAAGGCTTCGAATGACGCAGCCGGAGAGGTTACCGACGATAGCTAATTTGCACATTCCTTC
CATGAGTTTCTCCTCTTTGTCGTCCTCCGAGCTCGACACTGTGTCGACGGCGTCGTTCTTCCAAGACCACAGCGTCTCACTCGGCCGGCTCATCGGAATAAGGCCGGCCG
ACAAGACGTGGTTGTGCTTTCCGACTGCCACCGACGGAAGTGAGAGTGTATCGGTCAACGCCGGCGGCTTAGATGTGTCGAAAACGAACGGCGATGAAATATCGGGACGA
ATCTGCATTCCGATTGTGATCGGTATCGTCTTGAAGATGATCAGAAATTGGAGGAATTCGAGGAGT
Protein sequenceShow/hide protein sequence
DREILGGWPLGLEVMNTRLRMTQPERLPTIANLHIPSMSFSSLSSSELDTVSTASFFQDHSVSLGRLIGIRPADKTWLCFPTATDGSESVSVNAGGLDVSKTNGDEISGR
ICIPIVIGIVLKMIRNWRNSRS