CuGenDBv2

Gene ID	MS010888
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Glycogen phosphorylase 1-like
Genome location	scaffold35:2749962..2750423
RNA-Seq Expression	MS010888
Synteny	MS010888
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6594585.1 hypothetical protein SDJN03_11138, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-72

81.17

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE+ WPQKL+ LTH L+CP++AP L+SQ+F+A +IPCYLNW+YPP+LCPKPS+FPFLSLHLQWGFSLFL+R+SRF LPKTSWRSKCPFQ PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +D AQWGDEQRR YVRMRLRRKRLGSDV+PLIPI++PN+LLFSLLLWNPLSSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

XP_004134687.2 uncharacterized protein LOC101221431 [Cucumis sativus]

1.9e-69

79.22

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEEA WPQKL+ALTH L+CP++AP L+SQFF+A +IPCYLNW+YPP+LCPK S+FPFLSLHLQWGFSLFL+++SRFGLPKTSWRSKCP+Q PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +  AQW DEQR NY RMRLRRKRLGSDV+PLIPIM+PN+LLF+LLLWNP SSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

XP_022926954.1 uncharacterized protein LOC111433914 [Cucurbita moschata]

2.7e-71

80.52

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE+ WPQKL+ LTH L+CP++AP L+SQ+F+A +IPCYLNW+YPP+LCPKPS+FPF SLHLQWGFSLFL+R+SRF LPKTSWRSKCPFQ PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +D AQWGDEQRR YVRMRLRRKRLGSDV+PLIPI++PN+LLFSLLLWNPLSSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

XP_023517994.1 uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo]

1.6e-71

80.52

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE+ WPQKL+ LTH L+CP++AP L+SQ+F+A +IPCYLNW+YPP+LCPKPS+FPFLSLHLQWGFSLFL+R+SRFGLPKTSWRSKCPFQ PPP ILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        ++ AQWGDEQRR YVRMRLRRKRLGSDV+PLIPI++PN+LLFSLLLWNPLSSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

XP_038883097.1 uncharacterized protein LOC120074151 [Benincasa hispida]

3.3e-69

78.57

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE  WPQKL+ALTH L+CP++AP L+SQ+ +A +IPCYLNW+YPP+LCPK S+FPFLSLHLQWGFSLFL+R+SRFGLPKTSWRSKCP+Q PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        + +AQWGDEQR+NYVRMRLRRKRL SDV+PLIPIM+PN+LLFSLLLWNP SS+D
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KK88 Uncharacterized protein

9.4e-70

79.22

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEEA WPQKL+ALTH L+CP++AP L+SQFF+A +IPCYLNW+YPP+LCPK S+FPFLSLHLQWGFSLFL+++SRFGLPKTSWRSKCP+Q PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +  AQW DEQR NY RMRLRRKRLGSDV+PLIPIM+PN+LLF+LLLWNP SSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

A0A1S3B097 uncharacterized protein LOC103484499

3.0e-68

77.92

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE  W QKL+ALTH L+CP +AP L+SQFF+A +IPCYLNW+YPP+LCPK S+FPFLSLHLQWGFSLFL+++SRFGLPKTSWRSKCP+Q PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +  AQW DEQR NY RMRLRRKRLGSDV+PLIPIM+PN+LLF+LLLWNP SSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

A0A5A7UDV0 Uncharacterized protein

3.0e-68

77.92

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE  W QKL+ALTH L+CP +AP L+SQFF+A +IPCYLNW+YPP+LCPK S+FPFLSLHLQWGFSLFL+++SRFGLPKTSWRSKCP+Q PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +  AQW DEQR NY RMRLRRKRLGSDV+PLIPIM+PN+LLF+LLLWNP SSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

A0A6J1EGM1 uncharacterized protein LOC111433914

1.3e-71

80.52

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        MEE+ WPQKL+ LTH L+CP++AP L+SQ+F+A +IPCYLNW+YPP+LCPKPS+FPF SLHLQWGFSLFL+R+SRF LPKTSWRSKCPFQ PPPLILAK 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD
        +D AQWGDEQRR YVRMRLRRKRLGSDV+PLIPI++PN+LLFSLLLWNPLSSTD
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

A0A6J1IR68 uncharacterized protein LOC111478635

5.1e-68

78.43

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS
        ME+A W QKLEALTH L+CP++AP L+SQFF+A +IPCYLNW+YPP+LC KPS+FPF SLHLQWGFSLFL+R+SR GLP TSWRSKCP+Q PPPL+LA+ 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKS

Query:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSST
        +D AQW DEQRRNYVRMRLRRKRLGSDVNPLIPIM+PN+LLF LLLW PLSST
Subjt:  LDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSST

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G33855.1 unknown protein

7.4e-43

53.64

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Query:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHL-QWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAK
        MEE +W Q+++A+TH L  P++ P+L SQFF+ A IP Y++W+YPP+  P          HL QW  S F +RVSRFGLP TSWRS  P+ QPP  ++A 
Subjt:  MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHL-QWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAK

Query:  SLDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPL
         ++  +WG E+RR Y R RLRRKRL ++VNP IP++VPNLLLF+LLLW+PL
Subjt:  SLDAAQWGDEQRRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPL

Sequences

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CDS sequence

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ATGGAAGAAGCATCATGGCCTCAGAAGCTTGAAGCCCTAACCCACGCTCTGGTCTGCCCCAGCAGCGCCCCGGCGCTGTCTTCTCAGTTCTTCATGGCTGCCCAAATCCC
CTGCTACCTCAACTGGGAGTACCCCCCAATCCTCTGCCCCAAACCCTCCCTCTTCCCCTTTCTCTCTCTTCACCTTCAATGGGGTTTCTCTCTCTTCCTCAGAAGGGTCT
CCCGATTTGGCCTCCCCAAAACCTCGTGGCGCTCCAAATGCCCATTTCAGCAACCCCCGCCATTGATTCTCGCTAAATCTCTGGACGCCGCTCAGTGGGGCGATGAACAG
AGGAGGAATTACGTCAGGATGAGGCTCCGAAGGAAGCGCCTCGGCAGCGATGTTAATCCCTTGATCCCAATTATGGTTCCCAATTTGTTGCTCTTTTCTCTTCTGCTGTG
GAATCCATTGTCTTCCACTGAT

mRNA sequence

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Protein sequence

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MEEASWPQKLEALTHALVCPSSAPALSSQFFMAAQIPCYLNWEYPPILCPKPSLFPFLSLHLQWGFSLFLRRVSRFGLPKTSWRSKCPFQQPPPLILAKSLDAAQWGDEQ
RRNYVRMRLRRKRLGSDVNPLIPIMVPNLLLFSLLLWNPLSSTD

MS010888 (gene) of Bitter gourd (TR) v1 genome