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MS010920 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010920
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:2938819..2939064
RNA-Seq ExpressionMS010920
SyntenyMS010920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052636.1 hypothetical protein E6C27_scaffold120G002460 [Cucumis melo var. makuwa]1.5e-1257.83Show/hide
Query:  MANFNFWICLFLAFSY-FAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        MA  + W+CL L  SY FAGSESRLL    EP   L  +S+RPALLG ++ FHIGLVAV+ S +     VARLSPGGPD  HH
Subjt:  MANFNFWICLFLAFSY-FAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

KAE7995808.1 hypothetical protein FH972_000575 [Carpinus fangiana]4.4e-0443.9Show/hide
Query:  MANFNFWICLFLAFSYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        MA+  F +CL L F+ F  SE RL+          P  SY+PA+L  KE FH  +V+V   GTN + +  R SPGGPD  HH
Subjt:  MANFNFWICLFLAFSYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

KAE8647711.1 hypothetical protein Csa_003452 [Cucumis sativus]1.1e-0755.88Show/hide
Query:  SYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        S    SESR L    EP   L  KS+RPALLG ++ FHIG+VAV+ SG+     VARLSPGGPD  HH
Subjt:  SYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

KAE8647712.1 hypothetical protein Csa_003203 [Cucumis sativus]2.7e-0951.85Show/hide
Query:  FNFWICLFLAFS-YFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVA-VDSSGTNYHHKVARLSPGGPDAHHH
        F  W+CL L  S YFA S SRLL      S     KSY+PALLG K  F + LVA V+  GT +  + AR SPGGPD HHH
Subjt:  FNFWICLFLAFS-YFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVA-VDSSGTNYHHKVARLSPGGPDAHHH

KAG6581347.1 hypothetical protein SDJN03_21349, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1259.72Show/hide
Query:  LAFSYFAGSES-RLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        L+   F G++S RL+G  SEP+  +P K+YRPALLG KE FHIGLVAV+ SG+ +   VARLSPGGPD  HH
Subjt:  LAFSYFAGSES-RLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

TrEMBL top hitse value%identityAlignment
A0A0A0KLM5 Uncharacterized protein1.3e-0951.85Show/hide
Query:  FNFWICLFLAFS-YFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVA-VDSSGTNYHHKVARLSPGGPDAHHH
        F  W+CL L  S YFA S SRLL      S     KSY+PALLG K  F + LVA V+  GT +  + AR SPGGPD HHH
Subjt:  FNFWICLFLAFS-YFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVA-VDSSGTNYHHKVARLSPGGPDAHHH

A0A0A0KNI4 Uncharacterized protein1.9e-1357.83Show/hide
Query:  MANFNFWICLFLAFSY-FAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        MA  + W+CL L  SY FAGSESR L    EP   L  KS+RPALLG ++ FHIG+VAV+ SG+     VARLSPGGPD  HH
Subjt:  MANFNFWICLFLAFSY-FAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

A0A5A7UEP5 Uncharacterized protein7.3e-1357.83Show/hide
Query:  MANFNFWICLFLAFSY-FAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        MA  + W+CL L  SY FAGSESRLL    EP   L  +S+RPALLG ++ FHIGLVAV+ S +     VARLSPGGPD  HH
Subjt:  MANFNFWICLFLAFSY-FAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

A0A5N6Q984 Uncharacterized protein2.1e-0443.9Show/hide
Query:  MANFNFWICLFLAFSYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH
        MA+  F +CL L F+ F  SE RL+          P  SY+PA+L  KE FH  +V+V   GTN + +  R SPGGPD  HH
Subjt:  MANFNFWICLFLAFSYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATTTTAACTTCTGGATTTGCCTCTTCTTGGCCTTCTCCTATTTTGCAGGGTCTGAATCTCGACTTCTTGGTTTATACTCAGAACCAAGCCTCCCTCTTCCGGT
GAAATCATACCGGCCGGCGCTGTTGGGTCCCAAGGAGAAATTTCACATCGGGTTGGTCGCAGTCGACAGCTCGGGAACCAACTATCACCATAAGGTGGCTCGTCTGTCTC
CTGGAGGACCTGATGCCCACCATCAC
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATTTTAACTTCTGGATTTGCCTCTTCTTGGCCTTCTCCTATTTTGCAGGGTCTGAATCTCGACTTCTTGGTTTATACTCAGAACCAAGCCTCCCTCTTCCGGT
GAAATCATACCGGCCGGCGCTGTTGGGTCCCAAGGAGAAATTTCACATCGGGTTGGTCGCAGTCGACAGCTCGGGAACCAACTATCACCATAAGGTGGCTCGTCTGTCTC
CTGGAGGACCTGATGCCCACCATCAC
Protein sequenceShow/hide protein sequence
MANFNFWICLFLAFSYFAGSESRLLGLYSEPSLPLPVKSYRPALLGPKEKFHIGLVAVDSSGTNYHHKVARLSPGGPDAHHH