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MS010948 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010948
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLeucine-rich repeat protein kinase family protein
Genome locationscaffold35:3173110..3173412
RNA-Seq ExpressionMS010948
SyntenyMS010948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647723.1 hypothetical protein Csa_003961 [Cucumis sativus]1.7e-2972.73Show/hide
Query:  MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSR---QKSCFKFRVSC
        MSI ELPFSP N      PKVQRVSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR VYL+SSG+V NQTDL  +L+T+L+SR    KSCFKFR  C
Subjt:  MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSR---QKSCFKFRVSC

KAG6581370.1 hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3076.77Show/hide
Query:  MSISELPFSPPNNIVTS-TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQK---SC-FKFRV
        MSI ELPFSP N I TS TP VQ+VSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR+VYLS+SGEVFNQ DL R+LE++LSSR+K    C FKFRV
Subjt:  MSISELPFSPPNNIVTS-TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQK---SC-FKFRV

KAG7026513.1 hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-2574.71Show/hide
Query:  TSTPK-VQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSS----RQKSCFKFRVSCL
        T+TPK VQRV K TSDRLL+KF DATEFGFDY+TSGLWSPPLQR VYLSSSG VFN TDLQR+LE +LSS    R+ SCFKFR + L
Subjt:  TSTPK-VQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSS----RQKSCFKFRVSCL

KAG7034657.1 hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-3076Show/hide
Query:  MSISELPFSPPNNIVTS-TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQK---SC-FKFRVS
        MSI ELPFSP N I TS TP VQ+VSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR+VYLS+SGEVFNQ DL R+LE++LSSR+K    C FKFR S
Subjt:  MSISELPFSPPNNIVTS-TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQK---SC-FKFRVS

XP_038892892.1 uncharacterized protein LOC120081796 [Benincasa hispida]7.3e-3374.77Show/hide
Query:  MSISELPFSPPNNIVTS---TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQ---KSCFKFRV
        MSI +LPFSP N I TS   TPKVQRVSK TSDRLL+KFFDATEFGFDYETSGLWSPPLQR+VYLSSSG+VFNQTDL  +L+T+L+SR+   KSCFKFRV
Subjt:  MSISELPFSPPNNIVTS---TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQ---KSCFKFRV

Query:  S-CLITP
          C + P
Subjt:  S-CLITP

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ8 Uncharacterized protein2.4e-2974.23Show/hide
Query:  MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSR---QKSCFKFRV
        MSI ELPFSP N      PKVQRVSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR VYL+SSG+V NQTDL  +L+T+L+SR    KSCFKFRV
Subjt:  MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSR---QKSCFKFRV

A0A2I4H1F6 uncharacterized protein LOC109012687 isoform X31.6e-1747.17Show/hide
Query:  MSISELPFS----PPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKS------CF
        MSI E PFS     P+   TS+ +V+ VSK+ SDRL++KF+D +EFGFDYE SGLWSPP+QR V++SSSG++F + D+  +L + L   ++       CF
Subjt:  MSISELPFS----PPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKS------CF

Query:  KFRVSC
           V C
Subjt:  KFRVSC

A0A2I4H1H1 uncharacterized protein LOC109012687 isoform X21.6e-1747.17Show/hide
Query:  MSISELPFS----PPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKS------CF
        MSI E PFS     P+   TS+ +V+ VSK+ SDRL++KF+D +EFGFDYE SGLWSPP+QR V++SSSG++F + D+  +L + L   ++       CF
Subjt:  MSISELPFS----PPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKS------CF

Query:  KFRVSC
           V C
Subjt:  KFRVSC

A0A2I4H1I2 uncharacterized protein LOC109012687 isoform X11.6e-1747.17Show/hide
Query:  MSISELPFS----PPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKS------CF
        MSI E PFS     P+   TS+ +V+ VSK+ SDRL++KF+D +EFGFDYE SGLWSPP+QR V++SSSG++F + D+  +L + L   ++       CF
Subjt:  MSISELPFS----PPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKS------CF

Query:  KFRVSC
           V C
Subjt:  KFRVSC

A0A6P5XB47 uncharacterized protein LOC1112813652.3e-1651.58Show/hide
Query:  MSISEL-PFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLL----SSRQKSCF
        MS SE+ P SPPN    S  KVQ VSK  SDRLLEKFFD +E+ FDYE SGLWSPP++R+ +LSS+G +F + ++  R ++++    S R+  CF
Subjt:  MSISEL-PFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLL----SSRQKSCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCTCCGAACTGCCATTTTCACCTCCTAATAACATCGTCACTTCCACTCCCAAGGTTCAGAGGGTATCCAAATACACTTCGGACAGACTGCTGGAGAAATTCTT
CGATGCCACAGAATTTGGGTTCGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTCCAACGCAATGTCTATTTGAGCTCTTCGGGTGAAGTTTTCAATCAAACGGATT
TGCAAAGGAGACTCGAGACTCTGTTGAGCTCGAGGCAAAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTTAATCACACCACTT
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCTCCGAACTGCCATTTTCACCTCCTAATAACATCGTCACTTCCACTCCCAAGGTTCAGAGGGTATCCAAATACACTTCGGACAGACTGCTGGAGAAATTCTT
CGATGCCACAGAATTTGGGTTCGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTCCAACGCAATGTCTATTTGAGCTCTTCGGGTGAAGTTTTCAATCAAACGGATT
TGCAAAGGAGACTCGAGACTCTGTTGAGCTCGAGGCAAAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTTAATCACACCACTT
Protein sequenceShow/hide protein sequence
MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGEVFNQTDLQRRLETLLSSRQKSCFKFRVSCLITPL