; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010992 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010992
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold35:3478367..3479038
RNA-Seq ExpressionMS010992
SyntenyMS010992
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8365605.1 hypothetical protein BUALT_Bualt18G0123100 [Buddleja alternifolia]1.9e-12697.32Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+VSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSL+HAQSILAIWA+QVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

XP_008444193.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]1.5e-12698.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        KS +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

XP_038877609.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]8.6e-12798.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        KS SK +SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

XP_038882052.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]1.5e-12698.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+ SK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

XP_038882053.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]1.5e-12698.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+ SK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

TrEMBL top hitse value%identityAlignment
A0A1S3BAK6 Chlorophyll a-b binding protein, chloroplastic7.1e-12798.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        KS +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

A0A5D3DAQ5 Chlorophyll a-b binding protein, chloroplastic7.1e-12798.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        KS +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

A0A6J1CDN4 Chlorophyll a-b binding protein, chloroplastic1.2e-12698.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K VSK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

A0A6J1CKT5 Chlorophyll a-b binding protein, chloroplastic1.2e-12698.66Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K VSK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IF+EGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

C6TNE6 Chlorophyll a-b binding protein, chloroplastic1.6e-12697.77Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+V+K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

SwissProt top hitse value%identityAlignment
P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)9.5e-12997.77Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+ SK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

P09756 Chlorophyll a-b binding protein 3, chloroplastic2.8e-12897.32Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+V+K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLA PVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

P12329 Chlorophyll a-b binding protein 1, chloroplastic2.0e-12695.58Show/hide
Query:  KSVSKP--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG
        K+V KP   +SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG
Subjt:  KSVSKP--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG

Query:  SQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
        SQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYRIAGGPLGEV DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
Subjt:  SQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT

Query:  GKGPLENLADHLADPVNNNAWAYATN
        GKGPLENLADH+ADPVNNNAWAYATN
Subjt:  GKGPLENLADHLADPVNNNAWAYATN

P12471 Chlorophyll a-b binding protein, chloroplastic (Fragment)1.3e-12595.09Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+ SK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEA WFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGN SLIHAQSILAIWA+QV+LMGAVEGYRIAGGPLGEVTDPIYPGGSFDPL LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLA+PVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

P27493 Chlorophyll a-b binding protein 21, chloroplastic3.8e-12593.3Show/hide
Query:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ
        K+V+KPV+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQ
Subjt:  KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQ

Query:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
        IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGK
Subjt:  IFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK

Query:  GPLENLADHLADPVNNNAWAYATN
        GPLENLADHLADPVNNNAWAYATN
Subjt:  GPLENLADHLADPVNNNAWAYATN

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 34.9e-12090.27Show/hide
Query:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS
        K+V+KP   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Subjt:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS

Query:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
        QIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
Subjt:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT

Query:  GKGPLENLADHLADPVNNNAWAYATN
        GKGP+ENLADHLADPVNNNAWA+ATN
Subjt:  GKGPLENLADHLADPVNNNAWAYATN

AT1G29920.1 chlorophyll A/B-binding protein 24.9e-12090.27Show/hide
Query:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS
        K+V+KP   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Subjt:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS

Query:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
        QIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
Subjt:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT

Query:  GKGPLENLADHLADPVNNNAWAYATN
        GKGP+ENLADHLADPVNNNAWA+ATN
Subjt:  GKGPLENLADHLADPVNNNAWAYATN

AT1G29930.1 chlorophyll A/B binding protein 14.9e-12090.27Show/hide
Query:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS
        K+V+KP   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Subjt:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS

Query:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
        QIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
Subjt:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT

Query:  GKGPLENLADHLADPVNNNAWAYATN
        GKGP+ENLADHLADPVNNNAWA+ATN
Subjt:  GKGPLENLADHLADPVNNNAWAYATN

AT2G34420.1 photosystem II light harvesting complex gene B1B23.4e-12191.15Show/hide
Query:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS
        K+V+KP   SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Subjt:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS

Query:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
        QIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
Subjt:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT

Query:  GKGPLENLADHLADPVNNNAWAYATN
        GKGPLENLADHLADPVNNNAWA+ATN
Subjt:  GKGPLENLADHLADPVNNNAWAYATN

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B17.5e-12190.71Show/hide
Query:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS
        +  SKP   SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGS
Subjt:  KSVSKPVS-SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGS

Query:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
        QIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT
Subjt:  QIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT

Query:  GKGPLENLADHLADPVNNNAWAYATN
        GKGPLENLADHLADPVNNNAWA+ATN
Subjt:  GKGPLENLADHLADPVNNNAWAYATN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATCCGTCTCCAAGCCAGTTTCCTCCGGCAGCCCCTGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCGTCCTACCTCACTGGAGAATT
CCCCGGTGACTACGGCTGGGACACTGCTGGCCTTTCAGCCGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAGGTGATCCACTCTAGATGGGCCATGCTTGGGGCTC
TTGGTTGTGTCTTCCCTGAGCTTCTGTCCCGCAATGGGGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCCGGATCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTG
GGCAACCCTAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCATCTCAGGTTGTGTTGATGGGCGCCGTCGAGGGCTACCGTATTGCCGGTGGTCCCCTCGGTGA
GGTGACCGACCCGATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCATTTGCTGAATTGAAAGTGAAGGAGCTCAAGAACGGAAGGTTGG
CCATGTTCTCCATGTTTGGGTTCTTCGTTCAGGCCATTGTGACTGGAAAGGGTCCATTGGAGAACTTGGCAGACCATCTTGCAGACCCAGTTAACAACAACGCCTGGGCC
TACGCCACAAAC
mRNA sequenceShow/hide mRNA sequence
AAATCCGTCTCCAAGCCAGTTTCCTCCGGCAGCCCCTGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCGTCCTACCTCACTGGAGAATT
CCCCGGTGACTACGGCTGGGACACTGCTGGCCTTTCAGCCGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAGGTGATCCACTCTAGATGGGCCATGCTTGGGGCTC
TTGGTTGTGTCTTCCCTGAGCTTCTGTCCCGCAATGGGGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCCGGATCTCAGATCTTCAGCGAGGGTGGGCTCGACTATTTG
GGCAACCCTAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCATCTCAGGTTGTGTTGATGGGCGCCGTCGAGGGCTACCGTATTGCCGGTGGTCCCCTCGGTGA
GGTGACCGACCCGATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCATTTGCTGAATTGAAAGTGAAGGAGCTCAAGAACGGAAGGTTGG
CCATGTTCTCCATGTTTGGGTTCTTCGTTCAGGCCATTGTGACTGGAAAGGGTCCATTGGAGAACTTGGCAGACCATCTTGCAGACCCAGTTAACAACAACGCCTGGGCC
TACGCCACAAAC
Protein sequenceShow/hide protein sequence
KSVSKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYL
GNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA
YATN