; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011002 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011002
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhigh mobility group B protein 14
Genome locationscaffold35:3523854..3525729
RNA-Seq ExpressionMS011002
SyntenyMS011002
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR009071 - High mobility group box domain
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134634.1 high mobility group B protein 14 [Cucumis sativus]8.2e-5686.86Show/hide
Query:  DTGLSV-RSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY
        +TGL V RSE MK +A+ASRFN+DKRAKT K+P SK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYY
Subjt:  DTGLSV-RSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEIDG
        DIATEKRAEFDKAM EYKKR ESGID+ESEEDW IDG
Subjt:  DIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEIDG

XP_022146670.1 high mobility group B protein 14 isoform X1 [Momordica charantia]8.5e-61100Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKESGIDEESEEDWEIDG
        KAMAEYKKRKESGIDEESEEDWEIDG
Subjt:  KAMAEYKKRKESGIDEESEEDWEIDG

XP_022926030.1 high mobility group B protein 14 [Cucurbita moschata]2.8e-5688.32Show/hide
Query:  DTGLSV-RSEEMKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL V RSEEMKRSA+  RF N++K  KTNK PKS +KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSV-RSEEMKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
        YDIATEKRAEFDKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

XP_023544425.1 high mobility group B protein 14 [Cucurbita pepo subsp. pepo]2.2e-5689.05Show/hide
Query:  DTGLSV-RSEEMKRSARASRFNS-DKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL V RSEEMKRSA+A RFNS +K  KTNK PKS +KKKNDK D NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSV-RSEEMKRSARASRFNS-DKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
        YDIATEKRAEFDKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

XP_038881049.1 high mobility group B protein 14 isoform X1 [Benincasa hispida]5.7e-5789.05Show/hide
Query:  DTGLSV-RSEEMKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL V RSEEMKR+A+ASRFN+D KR KT K+PKSK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSV-RSEEMKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
        YDIAT+KRAEFDKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

TrEMBL top hitse value%identityAlignment
A0A0A0KKL8 HMG box domain-containing protein4.0e-5686.86Show/hide
Query:  DTGLSV-RSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY
        +TGL V RSE MK +A+ASRFN+DKRAKT K+P SK+KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYY
Subjt:  DTGLSV-RSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEIDG
        DIATEKRAEFDKAM EYKKR ESGID+ESEEDW IDG
Subjt:  DIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEIDG

A0A1S3AZW3 high mobility group B protein 148.3e-5485.4Show/hide
Query:  TGLSV-RSEEMKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY
        TGL V R +EMK +A+ASRFN+D KR KT K+PKSK+KKKND+FD NKPKKPPTAFFYFLDDFRKEFQEQNPDVK+MRDVGKACGEKWKTMTYEEKVQYY
Subjt:  TGLSV-RSEEMKRSARASRFNSD-KRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYY

Query:  DIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEIDG
        DIATEKRAEFDKAM EYKKR ESGI +ESEEDWEIDG
Subjt:  DIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEIDG

A0A6J1CXW3 high mobility group B protein 14 isoform X14.1e-61100Show/hide
Query:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
        MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
Subjt:  MKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD

Query:  KAMAEYKKRKESGIDEESEEDWEIDG
        KAMAEYKKRKESGIDEESEEDWEIDG
Subjt:  KAMAEYKKRKESGIDEESEEDWEIDG

A0A6J1EJV4 high mobility group B protein 141.4e-5688.32Show/hide
Query:  DTGLSV-RSEEMKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL V RSEEMKRSA+  RF N++K  KTNK PKS +KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
Subjt:  DTGLSV-RSEEMKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
        YDIATEKRAEFDKAMAEYKKRKESG+D+ESEEDWEID
Subjt:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

A0A6J1IKU3 high mobility group B protein 143.4e-5586.86Show/hide
Query:  DTGLSV-RSEEMKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY
        DTGL V RSEEMKRSA+  RF N++K  KTNK PKS +KKKNDKFD NKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACG+KWKTMTYEEKVQY
Subjt:  DTGLSV-RSEEMKRSARASRF-NSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQY

Query:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
        YDIA EKRAEFDKAMAEYKKRKESG+D ESEEDWEID
Subjt:  YDIATEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

SwissProt top hitse value%identityAlignment
O49595 High mobility group B protein 18.6e-1639.85Show/hide
Query:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA
        +++K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A
Subjt:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA

Query:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
         +++AE++K M  Y K  E G DE  +   EI+
Subjt:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

O64702 High mobility group B protein 147.8e-3359.69Show/hide
Query:  GLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA
        G S   E   +S+  +R ++  R +  ++PK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+YYDIA
Subjt:  GLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA

Query:  TEKRAEFDKAMAEYKKRKESGIDEESEED
        TEKR EF +AM EY KR ESG  +ESE D
Subjt:  TEKRAEFDKAMAEYKKRKESGIDEESEED

P40619 HMG1/2-like protein2.5e-1540.35Show/hide
Query:  SRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYK
        S+  SD +    K+    +K K    D NKPK+PP+AFF F++DFRK ++E++P+ KS+  VGKA G+KWK +T  EK  +   A +++ E++K +  Y 
Subjt:  SRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMAEYK

Query:  KRKESGIDEESEED
        K++ +G  EE E D
Subjt:  KRKESGIDEESEED

P40620 HMG1/2-like protein3.6e-1439.52Show/hide
Query:  RSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKR
        +S+   + A      + K A   K  K   K K  K D NKPK+PP+AFF F+ DFR+++++ +P+ KS+  VGKACGE+WK+++ EEK  Y D A +K+
Subjt:  RSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKR

Query:  AEFDKAMAEYKKRKESGIDEESEE
         E++  +  Y K+ E   DEE  +
Subjt:  AEFDKAMAEYKKRKESGIDEESEE

Q42344 High mobility group B protein 41.6e-1441.38Show/hide
Query:  ARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMA
        ++A   ++D+R KT      K+ KK    D N+PK+PP+AFF FL+DFRKEF   NP+ KS+  VGKA G +WK MT E+K  Y   A  ++ E+ K + 
Subjt:  ARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFDKAMA

Query:  EYKKRKESGIDEESEE
        +Y  +  SG + E ++
Subjt:  EYKKRKESGIDEESEE

Arabidopsis top hitse value%identityAlignment
AT2G34450.1 HMG-box (high mobility group) DNA-binding family protein5.5e-3459.69Show/hide
Query:  GLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA
        G S   E   +S+  +R ++  R +  ++PK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR++GK CGEKWKTMTYEEKV+YYDIA
Subjt:  GLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA

Query:  TEKRAEFDKAMAEYKKRKESGIDEESEED
        TEKR EF +AM EY KR ESG  +ESE D
Subjt:  TEKRAEFDKAMAEYKKRKESGIDEESEED

AT2G34450.2 HMG-box (high mobility group) DNA-binding family protein1.0e-3260Show/hide
Query:  GLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQYYDI
        G S   E   +S+  +R ++  R +  ++PK+  KKK  K     PKKP TAFF+FLDDFRK++QE+NPDVKSMR+V GK CGEKWKTMTYEEKV+YYDI
Subjt:  GLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDV-GKACGEKWKTMTYEEKVQYYDI

Query:  ATEKRAEFDKAMAEYKKRKESGIDEESEED
        ATEKR EF +AM EY KR ESG  +ESE D
Subjt:  ATEKRAEFDKAMAEYKKRKESGIDEESEED

AT3G51880.1 high mobility group B16.1e-1739.85Show/hide
Query:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA
        +++K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A
Subjt:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA

Query:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
         +++AE++K M  Y K  E G DE  +   EI+
Subjt:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

AT3G51880.2 high mobility group B16.1e-1739.85Show/hide
Query:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA
        +++K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A
Subjt:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA

Query:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
         +++AE++K M  Y K  E G DE  +   EI+
Subjt:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID

AT3G51880.3 high mobility group B16.1e-1739.85Show/hide
Query:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA
        +++K +  A +   D++    K P  K       K+K  K D NKPK+ P+AFF FL+DFR  F+++NP+VK++  VGKA G+KWK+M+  EK  Y + A
Subjt:  EEMKRSARASRFNSDKRAKTNKEPKSK------EKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIA

Query:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID
         +++AE++K M  Y K  E G DE  +   EI+
Subjt:  TEKRAEFDKAMAEYKKRKESGIDEESEEDWEID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACACCGGATTAAGTGTTAGAAGTGAAGAGATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACTCGGACAAGAGAGCAAAGACAAATAAAGAACCAAAATCAAAGGAGAA
GAAGAAGAATGATAAATTTGATGCAAATAAACCGAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCA
AGTCAATGCGTGATGTTGGCAAGGCATGTGGAGAGAAGTGGAAAACCATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACGGAGAAGCGTGCAGAGTTTGAT
AAAGCCATGGCAGAATATAAGAAGAGGAAGGAAAGTGGAATAGATGAAGAATCTGAGGAAGATTGGGAGATTGATGGA
mRNA sequenceShow/hide mRNA sequence
GACACCGGATTAAGTGTTAGAAGTGAAGAGATGAAGAGGTCAGCAAGAGCTAGTAGATTTAACTCGGACAAGAGAGCAAAGACAAATAAAGAACCAAAATCAAAGGAGAA
GAAGAAGAATGATAAATTTGATGCAAATAAACCGAAGAAACCACCTACTGCTTTCTTTTACTTTTTGGATGACTTCCGCAAGGAATTTCAAGAACAGAATCCAGATGTCA
AGTCAATGCGTGATGTTGGCAAGGCATGTGGAGAGAAGTGGAAAACCATGACGTATGAGGAAAAAGTACAATATTATGATATTGCCACGGAGAAGCGTGCAGAGTTTGAT
AAAGCCATGGCAGAATATAAGAAGAGGAAGGAAAGTGGAATAGATGAAGAATCTGAGGAAGATTGGGAGATTGATGGA
Protein sequenceShow/hide protein sequence
DTGLSVRSEEMKRSARASRFNSDKRAKTNKEPKSKEKKKNDKFDANKPKKPPTAFFYFLDDFRKEFQEQNPDVKSMRDVGKACGEKWKTMTYEEKVQYYDIATEKRAEFD
KAMAEYKKRKESGIDEESEEDWEIDG