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MS011013 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011013
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:3586190..3586405
RNA-Seq ExpressionMS011013
SyntenyMS011013
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052545.1 hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa]7.5e-0863.49Show/hide
Query:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQ--SLAFYCHL
        +KK  +  GFK    S+N  K     +AFSVMLPKGFVPPSG SSPCHNE PQ  SLAFYCHL
Subjt:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQ--SLAFYCHL

KAG6581427.1 hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]8.9e-0962.12Show/hide
Query:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSL--AFYCHLSAS
        + K+K  A F+   N+NNK       TAFSVMLPKGFVPPSG SSPCHN+ PQS   AFYCHLSA+
Subjt:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSL--AFYCHLSAS

KAG6594469.1 hypothetical protein SDJN03_11022, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0864.81Show/hide
Query:  KRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS
        K+ +   NK K     TAFS MLPKGFVPPSG SSPCHNE P+ +AFYCHLSA+
Subjt:  KRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS

KAG7026467.1 hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-0864.81Show/hide
Query:  KRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS
        K+ +   NK K     TAFS MLPKGFVPPSG SSPCHNE P+ +AFYCHLSA+
Subjt:  KRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS

KAG7034719.1 hypothetical protein SDJN02_04449, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-0860.61Show/hide
Query:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSL--AFYCHLSAS
        + K+K  A F+   N+NNK +      AFSVMLPKGFVPPSG SSPCHN+ PQS   AFYCHLSA+
Subjt:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSL--AFYCHLSAS

TrEMBL top hitse value%identityAlignment
A0A0A0KIK1 Uncharacterized protein6.9e-0760.94Show/hide
Query:  KRKI---RAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQ--SLAFYCHL
        KRK+     GFK   + N   K     +AFS MLPKGFVPPSG SSPCHNE PQ  SLAFYCHL
Subjt:  KRKI---RAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQ--SLAFYCHL

A0A438JP87 Uncharacterized protein2.0e-0658.49Show/hide
Query:  KRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSA
        K+RR    K   +     FS MLPKGFVPPSG SSPCHN+ P S+AFYC LS+
Subjt:  KRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSA

A0A5A7UFQ9 Uncharacterized protein3.6e-0863.49Show/hide
Query:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQ--SLAFYCHL
        +KK  +  GFK    S+N  K     +AFSVMLPKGFVPPSG SSPCHNE PQ  SLAFYCHL
Subjt:  EKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQ--SLAFYCHL

A0A5N5ID33 Uncharacterized protein2.6e-0655.22Show/hide
Query:  EKKRKIRAGFKRRRNSNNKPKPTPT-----PTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLS
        +K RK+R     +RN N K K T T        FSVMLPKGFVPPSG SSPCHN  P S+AF+C L+
Subjt:  EKKRKIRAGFKRRRNSNNKPKPTPT-----PTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLS

A0A7J6ER19 Uncharacterized protein9.0e-0751.52Show/hide
Query:  TTEKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS
        T +KK K +     +R   N      T  +FSVMLPKGFVPPSG SSPCHNE P S+ F+C L  S
Subjt:  TTEKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18335.1 unknown protein8.9e-0755.17Show/hide
Query:  RAG-FKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQS-LAFYCHLS
        RAG FK     NN          FSVMLPKGFVPPSG SSPCHN+ P S    +C LS
Subjt:  RAG-FKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQS-LAFYCHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAGCCAAACCATTCCAACAACGGAGAAGAAGAGGAAAATCAGGGCCGGGTTCAAACGGCGTCGTAATAGCAACAACAAGCCAAAGCCAACGCCAACGCCAACGGCCTT
CTCTGTGATGCTTCCCAAGGGCTTCGTCCCGCCCTCTGGCCGTTCGTCTCCTTGCCACAACGAAATTCCACAATCTCTCGCTTTCTACTGCCATCTCTCTGCCTCC
mRNA sequenceShow/hide mRNA sequence
AACAGCCAAACCATTCCAACAACGGAGAAGAAGAGGAAAATCAGGGCCGGGTTCAAACGGCGTCGTAATAGCAACAACAAGCCAAAGCCAACGCCAACGCCAACGGCCTT
CTCTGTGATGCTTCCCAAGGGCTTCGTCCCGCCCTCTGGCCGTTCGTCTCCTTGCCACAACGAAATTCCACAATCTCTCGCTTTCTACTGCCATCTCTCTGCCTCC
Protein sequenceShow/hide protein sequence
NSQTIPTTEKKRKIRAGFKRRRNSNNKPKPTPTPTAFSVMLPKGFVPPSGRSSPCHNEIPQSLAFYCHLSAS