CuGenDBv2

Gene ID	MS011019
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein S24
Genome location	scaffold35:3646807..3647065
RNA-Seq Expression	MS011019
Synteny	MS011019
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001976 - Ribosomal protein S24e

Homology

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GenBank top hits

e value

%identity

Alignment

EPS57470.1 hypothetical protein M569_17346 [Genlisea aurea]

1.2e-12

61.63

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQLKERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

EPS72548.1 hypothetical protein M569_02208, partial [Genlisea aurea]

1.2e-12

61.63

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQLKERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

KAF7142846.1 hypothetical protein RHSIM_Rhsim05G0160100 [Rhododendron simsii]

3.5e-12

60.47

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQ+KERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

XP_022852519.1 uncharacterized protein LOC111374124 [Olea europaea var. sylvestris]

2.0e-12

61.63

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Query:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   K SGF LIY D I+NA KY  KYML  RN L TKVGK RKQLKERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

XP_022883209.1 40S ribosomal protein S24-1-like [Olea europaea var. sylvestris]

2.0e-12

61.63

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D I+NA KY  KYML  RN L TKVGK RKQLKERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

TrEMBL top hits

e value

%identity

Alignment

A0A4S8ILU0 40S ribosomal protein S24

2.2e-12

59.3

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQ+KERKNRA K+ G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

A0A6I9QUI8 40S ribosomal protein S24

2.2e-12

59.3

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQ+KERKNRA K+ G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

A0A6P3ZCU6 40S ribosomal protein S24

1.7e-12

60.47

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQLKERKNRA KI G+++ +        KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

S8BSC9 40S ribosomal protein S24

5.8e-13

61.63

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQLKERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

S8E9K2 40S ribosomal protein S24 (Fragment)

5.8e-13

61.63

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Query:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK
        PN IFVFK  THF   KS GF LIY D +ENA KY  KY L IRN LATKV K RKQLKERKNRA KI G+++ +      A KKK
Subjt:  PNVIFVFKILTHFRQAKS-GFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

SwissProt top hits

e value

%identity

Alignment

Q8LC83 40S ribosomal protein S24-2

4.7e-12

57.33

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Query:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR
        PN IF FK  THF   K SG+ LIY D +ENA K+  KY L IRN L TK+ K RKQ+KERKNRA KI G+++ +
Subjt:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR

Q9SS17 40S ribosomal protein S24-1

2.1e-12

58.67

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Query:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR
        PN IFVFK  THF   K SGF LIY D +E+A K+  KY L IRN L TK+ K RKQ+KERKNRA KI G+++ +
Subjt:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR

Arabidopsis top hits

e value

%identity

Alignment

AT3G04920.1 Ribosomal protein S24e family protein

1.5e-13

58.67

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Query:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR
        PN IFVFK  THF   K SGF LIY D +E+A K+  KY L IRN L TK+ K RKQ+KERKNRA KI G+++ +
Subjt:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR

AT5G28060.1 Ribosomal protein S24e family protein

3.4e-13

57.33

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Query:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR
        PN IF FK  THF   K SG+ LIY D +ENA K+  KY L IRN L TK+ K RKQ+KERKNRA KI G+++ +
Subjt:  PNVIFVFKILTHFRQAK-SGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPR

Sequences

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CDS sequence

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CCAAATGTGATCTTTGTTTTCAAGATTCTGACTCACTTCCGTCAGGCAAAATCTGGGTTTGACTTGATATATGGTGATTACATTGAGAATGCAATGAAGTACAGACTCAA
ATACATGCTAATAATCAGGAATGAACTTGCCACTAAGGTAGGAAAACCAAGAAAGCAGTTGAAGGAAAGAAAGAACAGGGCCAGCAAAATCTGTGGAATTGAAAGACCAA
GGCAACAGATTCTTACCAATGCAATGAAGAAGAAG

mRNA sequence

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Protein sequence

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PNVIFVFKILTHFRQAKSGFDLIYGDYIENAMKYRLKYMLIIRNELATKVGKPRKQLKERKNRASKICGIERPRQQILTNAMKKK

MS011019 (gene) of Bitter gourd (TR) v1 genome