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MS011021 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011021
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVQ motif-containing protein 1-like
Genome locationscaffold35:3673903..3674226
RNA-Seq ExpressionMS011021
SyntenyMS011021
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052539.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]1.2e-1451.4Show/hide
Query:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD
        K+A V+VVLIEYHH+QTD SNFKSVVQSLTG  K SS+A        G    R+R+ + +   N++II    +     +HT SFKDLDRLL   LPS++D
Subjt:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD

Query:  FDWIWAD
         DWI  D
Subjt:  FDWIWAD

KAG6581431.1 hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1350.49Show/hide
Query:  VKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQDFDWI
        VKVVLIEYHHV TDVSNFKSVVQ+LTG   + SSA+       G   KR R +++ +  N+         T   LH+ SFKDLDR L  +LP+++D +WI
Subjt:  VKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQDFDWI

Query:  WAD
        WAD
Subjt:  WAD

KGN49401.1 hypothetical protein Csa_003856 [Cucumis sativus]8.1e-1449.53Show/hide
Query:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD
        K+A V+VVLIEYHH+QTD SNFKSVVQSLTG  K S +A  D     G+  ++R+R +     +++I  T        +HT SFKDLDRLL   LPS++D
Subjt:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD

Query:  FDWIWAD
         +WI  D
Subjt:  FDWIWAD

XP_022146499.1 uncharacterized protein LOC111015700 [Momordica charantia]3.7e-5199.07Show/hide
Query:  AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQ
        AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQ
Subjt:  AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQ

Query:  DFDWIWAD
        D DWIWAD
Subjt:  DFDWIWAD

XP_022926399.1 VQ motif-containing protein 10-like [Cucurbita moschata]1.1e-1347.75Show/hide
Query:  SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRD---LDSAAAN-QTIIQTTATTTPFDLHTMSFKDLD-RLLKFNLP
        + PVKVV IEYHH+QTDV+NFKSVVQ+LTG            S   G+T K+RR D   +D+ +A  +   ++  T T   L + SF+DLD  LLK  LP
Subjt:  SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRD---LDSAAAN-QTIIQTTATTTPFDLHTMSFKDLD-RLLKFNLP

Query:  SVQDFDWIWAD
        S++D +WIWAD
Subjt:  SVQDFDWIWAD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein3.9e-1449.53Show/hide
Query:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD
        K+A V+VVLIEYHH+QTD SNFKSVVQSLTG  K S +A  D     G+  ++R+R +     +++I  T        +HT SFKDLDRLL   LPS++D
Subjt:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD

Query:  FDWIWAD
         +WI  D
Subjt:  FDWIWAD

A0A5D3CN21 VQ motif-containing protein 1-like6.0e-1551.4Show/hide
Query:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD
        K+A V+VVLIEYHH+QTD SNFKSVVQSLTG  K SS+A        G    R+R+ + +   N++II    +     +HT SFKDLDRLL   LPS++D
Subjt:  KSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQD

Query:  FDWIWAD
         DWI  D
Subjt:  FDWIWAD

A0A6J1CYB0 uncharacterized protein LOC1110157001.8e-5199.07Show/hide
Query:  AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQ
        AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQ
Subjt:  AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQ

Query:  DFDWIWAD
        D DWIWAD
Subjt:  DFDWIWAD

A0A6J1EF02 VQ motif-containing protein 10-like5.1e-1447.75Show/hide
Query:  SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRD---LDSAAAN-QTIIQTTATTTPFDLHTMSFKDLD-RLLKFNLP
        + PVKVV IEYHH+QTDV+NFKSVVQ+LTG            S   G+T K+RR D   +D+ +A  +   ++  T T   L + SF+DLD  LLK  LP
Subjt:  SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRD---LDSAAAN-QTIIQTTATTTPFDLHTMSFKDLD-RLLKFNLP

Query:  SVQDFDWIWAD
        S++D +WIWAD
Subjt:  SVQDFDWIWAD

A0A6J1KT83 VQ motif-containing protein 107.4e-1345.13Show/hide
Query:  SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRR------DLDSAAANQTIIQTTATTTPFDLHTMSFKDLD-RLLKFN
        + PVKVV IEYHH+QTDVSNFKSVVQ+LTG            +  AG  T+++ R      D+ SA   ++ +     TT   + + SF+DLD  LLK  
Subjt:  SAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRR------DLDSAAANQTIIQTTATTTPFDLHTMSFKDLD-RLLKFN

Query:  LPSVQDFDWIWAD
        LPS++D +WIWAD
Subjt:  LPSVQDFDWIWAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGAAATCAGCCCCAGTGAAGGTGGTGCTGATCGAGTACCACCACGTCCAGACCGACGTGTCGAACTTCAAGTCCGTCGTCCAGAGCCTCACCGGCAACGCCAAGCGGTC
CTCCTCCGCCCTGCCCGACACATCGTTCCCGGCAGGAGACACCACCAAGAGGCGGCGCCGGGATTTGGACTCGGCGGCGGCCAATCAGACCATTATTCAAACCACCGCCA
CTACGACGCCGTTTGATCTGCACACCATGTCGTTTAAAGACTTGGATCGCTTGCTCAAATTCAACCTCCCTTCCGTCCAGGATTTCGACTGGATTTGGGCTGAT
mRNA sequenceShow/hide mRNA sequence
GCGAAATCAGCCCCAGTGAAGGTGGTGCTGATCGAGTACCACCACGTCCAGACCGACGTGTCGAACTTCAAGTCCGTCGTCCAGAGCCTCACCGGCAACGCCAAGCGGTC
CTCCTCCGCCCTGCCCGACACATCGTTCCCGGCAGGAGACACCACCAAGAGGCGGCGCCGGGATTTGGACTCGGCGGCGGCCAATCAGACCATTATTCAAACCACCGCCA
CTACGACGCCGTTTGATCTGCACACCATGTCGTTTAAAGACTTGGATCGCTTGCTCAAATTCAACCTCCCTTCCGTCCAGGATTTCGACTGGATTTGGGCTGAT
Protein sequenceShow/hide protein sequence
AKSAPVKVVLIEYHHVQTDVSNFKSVVQSLTGNAKRSSSALPDTSFPAGDTTKRRRRDLDSAAANQTIIQTTATTTPFDLHTMSFKDLDRLLKFNLPSVQDFDWIWAD