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MS011035 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011035
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCoiled-coil and C2 domain-containing protein 1-like isoform X2
Genome locationscaffold35:3787267..3788721
RNA-Seq ExpressionMS011035
SyntenyMS011035
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026452.1 hypothetical protein SDJN02_10452 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3089.02Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS+ PPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL YCQELLELQRKWDEPYIELK P+D RKETMKPSKRQKK+R
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

XP_008439608.1 PREDICTED: uncharacterized protein LOC103484351 [Cucumis melo]1.0e-3293.9Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS PPPPPPPPP FDPSRMIGII+RKALIKELAAAYHAECL YCQELLELQRKWDEPYIELKAPDD RKETMKPSKRQKKSR
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

XP_022926864.1 uncharacterized protein LOC111433847 [Cucurbita moschata]1.2e-3089.02Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS+ PPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL YCQELLELQRKWDEPYIELK P+D RKETMKPSKRQKK+R
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

XP_023003492.1 uncharacterized protein LOC111497089 [Cucurbita maxima]1.2e-3089.02Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS+ PPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL YCQELLELQRKWDEPYIELK P+D RKETMKPSKRQKK+R
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

XP_023517756.1 uncharacterized protein LOC111781421 [Cucurbita pepo subsp. pepo]1.2e-3089.02Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS+ PPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL YCQELLELQRKWDEPYIELK P+D RKETMKPSKRQKK+R
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

TrEMBL top hitse value%identityAlignment
A0A1S3AZS8 uncharacterized protein LOC1034843514.9e-3393.9Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS PPPPPPPPP FDPSRMIGII+RKALIKELAAAYHAECL YCQELLELQRKWDEPYIELKAPDD RKETMKPSKRQKKSR
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

A0A5D3CQ43 Uncharacterized protein4.9e-3393.9Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS PPPPPPPPP FDPSRMIGII+RKALIKELAAAYHAECL YCQELLELQRKWDEPYIELKAPDD RKETMKPSKRQKKSR
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

A0A6J1EGC9 uncharacterized protein LOC1114338476.0e-3189.02Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS+ PPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL YCQELLELQRKWDEPYIELK P+D RKETMKPSKRQKK+R
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

A0A6J1KMP8 uncharacterized protein LOC1114970896.0e-3189.02Show/hide
Query:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        DS+ PPP PPPPPFDPSRMIGIIKRKAL+KELAAAYHAECL YCQELLELQRKWDEPYIELK P+D RKETMKPSKRQKK+R
Subjt:  DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

A0A6P9E7N7 acrosin-like3.0e-3087.5Show/hide
Query:  APPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR
        +PPPPPPPPPPFDPSRMIGIIKRKALIKELAA YHAECLAYCQELLELQRKW+EP+I+LKAP+DSRKET++P+KR KKSR
Subjt:  APPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18400.1 unknown protein1.6e-2066.28Show/hide
Query:  SAPPPPPP----PPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMK-PSKRQKKSR
        S P  PPP    PP  FDPSRMIGIIKRKALIK+LAAAYH ECLA C+ELLELQ++ DEP+++ KA +D RKET++  SKR KK R
Subjt:  SAPPPPPP----PPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMK-PSKRQKKSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTCTGCACCTCCGCCACCGCCCCCGCCCCCGCCTCCTTTTGATCCCAGTCGAATGATTGGCATCATTAAACGGAAGGCCTTGATAAAAGAACTAGCTGCTGCATATCA
CGCCGAGTGTCTTGCATACTGCCAAGAGCTTCTTGAGCTTCAAAGAAAATGGGACGAGCCATATATTGAATTAAAAGCACCTGATGATTCAAGAAAGGAGACAATGAAGC
CTAGCAAACGTCAAAAGAAATCCCGC
mRNA sequenceShow/hide mRNA sequence
GATTCTGCACCTCCGCCACCGCCCCCGCCCCCGCCTCCTTTTGATCCCAGTCGAATGATTGGCATCATTAAACGGAAGGCCTTGATAAAAGAACTAGCTGCTGCATATCA
CGCCGAGTGTCTTGCATACTGCCAAGAGCTTCTTGAGCTTCAAAGAAAATGGGACGAGCCATATATTGAATTAAAAGCACCTGATGATTCAAGAAAGGAGACAATGAAGC
CTAGCAAACGTCAAAAGAAATCCCGC
Protein sequenceShow/hide protein sequence
DSAPPPPPPPPPPFDPSRMIGIIKRKALIKELAAAYHAECLAYCQELLELQRKWDEPYIELKAPDDSRKETMKPSKRQKKSR