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MS011038 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011038
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationscaffold35:3801644..3801886
RNA-Seq ExpressionMS011038
SyntenyMS011038
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052524.1 hypothetical protein E6C27_scaffold120G001250 [Cucumis melo var. makuwa]1.4e-1870.24Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPR---SPSTVSASTAASASSRYFVRNINRSFSTFND
        MANSR+ARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+  KN+   +P+   S S+ SAS A  A+S YFVRNI+R FS FND
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPR---SPSTVSASTAASASSRYFVRNINRSFSTFND

KAG6594447.1 hypothetical protein SDJN03_11000, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2075.9Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSP--RSPSTVSASTAASASSRYFVRNINRSFSTFND
        MANSR+ARFVTEVAPPQIISVMRRRTSKVLDTISEEERD  K +   SP   SPST  A    SA+SRYFVRNINRSFST N+
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSP--RSPSTVSASTAASASSRYFVRNINRSFSTFND

KAG7034740.1 hypothetical protein SDJN02_04470, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-1374.63Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPRS--PSTVSASTAASASS
        MANSR+ARFVTEVAPPQIISVMRRRTSKVLDTISEEERD  KN+   SPRS   ST  A    SA+S
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPRS--PSTVSASTAASASS

KGN49420.1 hypothetical protein Csa_003492 [Cucumis sativus]1.2e-1769.05Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSP---RSPSTVSASTAASASSRYFVRNINRSFSTFND
        MANSR+ARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+  KN+   +P    S ST SAS   +A+S YFVRNI+R FS  ND
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSP---RSPSTVSASTAASASSRYFVRNINRSFSTFND

XP_025013214.1 uncharacterized protein LOC8284058 [Ricinus communis]3.9e-1359.55Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-SGKNDCATSPRSP---STVSASTAASA----SSRYFVRNINRSFSTFND
        MANSR+ARF+TEVAPPQ ISV+RRR SK+LDTI+EEERD S  N  A++P SP   ST +AS +A+A    +S+YF R + RSFS F +
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-SGKNDCATSPRSP---STVSASTAASA----SSRYFVRNINRSFSTFND

TrEMBL top hitse value%identityAlignment
A0A0A0KI68 Uncharacterized protein5.7e-1869.05Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSP---RSPSTVSASTAASASSRYFVRNINRSFSTFND
        MANSR+ARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+  KN+   +P    S ST SAS   +A+S YFVRNI+R FS  ND
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSP---RSPSTVSASTAASASSRYFVRNINRSFSTFND

A0A5D3CN92 Uncharacterized protein6.7e-1970.24Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPR---SPSTVSASTAASASSRYFVRNINRSFSTFND
        MANSR+ARFVTEVAPPQIISVMRRRTSKVLDTISEE+R+  KN+   +P+   S S+ SAS A  A+S YFVRNI+R FS FND
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPR---SPSTVSASTAASASSRYFVRNINRSFSTFND

A0A7N2LPW5 Uncharacterized protein8.5e-1457.95Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDC-ATSPRSPSTVSASTAASAS-------SRYFVRNINRSFSTFN
        MANSR+ARFV+EVAPPQ ISV+R+RTSK+LDTI EEERD+  ND  A  PRS S+ S S+A+++S       S+YF+R ++ SFS F+
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDC-ATSPRSPSTVSASTAASAS-------SRYFVRNINRSFSTFN

B9S0W8 Uncharacterized protein1.9e-1359.55Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-SGKNDCATSPRSP---STVSASTAASA----SSRYFVRNINRSFSTFND
        MANSR+ARF+TEVAPPQ ISV+RRR SK+LDTI+EEERD S  N  A++P SP   ST +AS +A+A    +S+YF R + RSFS F +
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERD-SGKNDCATSPRSP---STVSASTAASA----SSRYFVRNINRSFSTFND

M5WKN5 Uncharacterized protein7.2e-1353.68Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERD------------SGKNDCATSPRSP----STVSASTAASASSRYFVRNINRSFSTF
        MANSRLARF+TEVAPPQ +SVMR RTSKVLDTI EEER+            S    CA S  SP    S  SA+ AA   S+YF++ ++R+FS F
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERD------------SGKNDCATSPRSP----STVSASTAASASSRYFVRNINRSFSTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)7.9e-1248.45Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDC-------------ATSPRSPSTVSASTAASASS---RYFVRNINRSFSTFND
        MA SRLARF+TEVAPPQ ++VMRRRT+KVLDTI EEER+ G +                TSP S S  SAS +AS +S   ++ V     SF  F +
Subjt:  MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDC-------------ATSPRSPSTVSASTAASASS---RYFVRNINRSFSTFND

AT4G21060.1 Galactosyltransferase family protein3.8e-0666.67Show/hide
Query:  MANSRLARFVTEVAPPQIISVMRRR--TSKVLDTISEEE
        MA SRLARFV+EVAPPQ ++VMRR     + LDTI EEE
Subjt:  MANSRLARFVTEVAPPQIISVMRRR--TSKVLDTISEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATTCCCGTTTAGCGAGGTTCGTTACCGAGGTTGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGA
GAGAGACAGTGGGAAGAATGACTGTGCTACTTCCCCAAGAAGCCCGTCAACTGTCTCTGCTTCTACAGCTGCTAGCGCCAGTTCTAGGTACTTCGTTAGAAATATAAATA
GATCTTTCTCCACATTCAATGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATTCCCGTTTAGCGAGGTTCGTTACCGAGGTTGCGCCACCACAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGA
GAGAGACAGTGGGAAGAATGACTGTGCTACTTCCCCAAGAAGCCCGTCAACTGTCTCTGCTTCTACAGCTGCTAGCGCCAGTTCTAGGTACTTCGTTAGAAATATAAATA
GATCTTTCTCCACATTCAATGAT
Protein sequenceShow/hide protein sequence
MANSRLARFVTEVAPPQIISVMRRRTSKVLDTISEEERDSGKNDCATSPRSPSTVSASTAASASSRYFVRNINRSFSTFND