; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011052 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011052
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOB domain-containing protein 36-like
Genome locationscaffold35:3921458..3921820
RNA-Seq ExpressionMS011052
SyntenyMS011052
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052511.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]2.5e-3259.17Show/hide
Query:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK
        S +  P   YGSPCA+C +LRRKC +DC+FAPHFPAD  +KFE+  R YGASN+ KI   LR+DER+E   SLV+EAEAR  DPV GCV  IS L DRL+
Subjt:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK

Query:  RIQSDLVDAKRELSIYLGSE
         +Q++L  A+RELS Y+ SE
Subjt:  RIQSDLVDAKRELSIYLGSE

MBA0772010.1 hypothetical protein [Gossypium trilobum]1.8e-3058.41Show/hide
Query:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV
        S   SPCAAC +LRRKC  +CVFAP+FP D  +KF+   + YGASN+ K+ + L H +R+EA  SL YEAEAR  DPVYGCVG ISIL  RLK++Q DL 
Subjt:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV

Query:  DAKRELSIYLGSE
        +AK+ELS Y+G +
Subjt:  DAKRELSIYLGSE

XP_008439580.1 PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]2.5e-3259.17Show/hide
Query:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK
        S +  P   YGSPCA+C +LRRKC +DC+FAPHFPAD  +KFE+  R YGASN+ KI   LR+DER+E   SLV+EAEAR  DPV GCV  IS L DRL+
Subjt:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK

Query:  RIQSDLVDAKRELSIYLGSE
         +Q++L  A+RELS Y+ SE
Subjt:  RIQSDLVDAKRELSIYLGSE

XP_022146502.1 LOB domain-containing protein 36-like [Momordica charantia]8.1e-63100Show/hide
Query:  MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL
        MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL
Subjt:  MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL

Query:  KRIQSDLVDAKRELSIYLGSE
        KRIQSDLVDAKRELSIYLGSE
Subjt:  KRIQSDLVDAKRELSIYLGSE

XP_038881578.1 protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]1.0e-3360.83Show/hide
Query:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK
        S S+ P   YGSPCAAC +LRRKC  DC+FAPHFPAD  +KFE     YGASN+ K+ ++L +DERD+AA SL+YEAEA + DPV+GCVGFISIL  RL 
Subjt:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK

Query:  RIQSDLVDAKRELSIYLGSE
         +Q +L  A+RELS Y+ SE
Subjt:  RIQSDLVDAKRELSIYLGSE

TrEMBL top hitse value%identityAlignment
A0A1S3AYN9 LOB domain-containing protein 12-like1.2e-3259.17Show/hide
Query:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK
        S +  P   YGSPCA+C +LRRKC +DC+FAPHFPAD  +KFE+  R YGASN+ KI   LR+DER+E   SLV+EAEAR  DPV GCV  IS L DRL+
Subjt:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK

Query:  RIQSDLVDAKRELSIYLGSE
         +Q++L  A+RELS Y+ SE
Subjt:  RIQSDLVDAKRELSIYLGSE

A0A5D3CQL4 LOB domain-containing protein 12-like1.2e-3259.17Show/hide
Query:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK
        S +  P   YGSPCA+C +LRRKC +DC+FAPHFPAD  +KFE+  R YGASN+ KI   LR+DER+E   SLV+EAEAR  DPV GCV  IS L DRL+
Subjt:  SSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLK

Query:  RIQSDLVDAKRELSIYLGSE
         +Q++L  A+RELS Y+ SE
Subjt:  RIQSDLVDAKRELSIYLGSE

A0A6J1CZR4 LOB domain-containing protein 36-like3.9e-63100Show/hide
Query:  MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL
        MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL
Subjt:  MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL

Query:  KRIQSDLVDAKRELSIYLGSE
        KRIQSDLVDAKRELSIYLGSE
Subjt:  KRIQSDLVDAKRELSIYLGSE

A0A6P3ZHR4 LOB domain-containing protein 36-like4.4e-3055.37Show/hide
Query:  MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL
        MS S S  S   SPCAAC + RRKC  +C+FAP+FP D  +KF    R YGASN+ K+ + L    R++A  SL YEAEAR  DPVYGCVGFISIL +RL
Subjt:  MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRL

Query:  KRIQSDLVDAKRELSIYLGSE
        +++QSDL  AK+EL+ Y+G +
Subjt:  KRIQSDLVDAKRELSIYLGSE

A0A7J9EG51 LOB domain-containing protein8.8e-3158.41Show/hide
Query:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV
        S   SPCAAC +LRRKC  +CVFAP+FP D  +KF+   + YGASN+ K+ + L H +R+EA  SL YEAEAR  DPVYGCVG ISIL  RLK++Q DL 
Subjt:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV

Query:  DAKRELSIYLGSE
        +AK+ELS Y+G +
Subjt:  DAKRELSIYLGSE

SwissProt top hitse value%identityAlignment
A1YKY7 Protein IAL18.8e-2855.66Show/hide
Query:  GSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAK
        GSPCAAC +LRRKC  DCVFAP+FP D+ +KF    R +GASN+ K+ + +   +R++A  SL YEA+ R  DPVYGCVG ISIL   L+++Q DL  AK
Subjt:  GSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAK

Query:  RELSIY
         ELS Y
Subjt:  RELSIY

A2WXT0 LOB domain-containing protein 61.5e-2755.66Show/hide
Query:  GSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAK
        GSPCAAC +LRRKC  DCVFAP+FP D+ +KF    R +GASN+ K+ + L   +R++A  SL YEA+ R  DPVYGCV  ISIL   L+++Q DL  AK
Subjt:  GSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAK

Query:  RELSIY
         ELS Y
Subjt:  RELSIY

O64836 LOB domain-containing protein 103.9e-2855.05Show/hide
Query:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR
        +PCAAC  LRRKC  +CVFAP+FP  + +KF    R +GASN+ KI + L  D+R++   SL YEAEAR  DP+YGCVG IS L   LK+IQ DL+ AK 
Subjt:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR

Query:  ELSIYLGSE
        EL  YLG +
Subjt:  ELSIYLGSE

Q32SG3 LOB domain-containing protein 62.3e-2856.6Show/hide
Query:  GSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAK
        GSPCAAC +LRRKC  DCVFAP+FP D+ +KF    R +GASN+ K+ + L   +R++A  SL YEA+ R  DPVYGCVG ISIL   L+++Q DL  AK
Subjt:  GSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAK

Query:  RELSIY
         ELS Y
Subjt:  RELSIY

Q9FKZ3 LOB domain-containing protein 361.4e-3055.05Show/hide
Query:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR
        SPCAAC +LRRKC  +CVFAP+FP D  +KF    + +GASN+ K+ + L  ++R++A  SL YEAEAR  DPVYGCVG ISIL  RLK++  DL +AK+
Subjt:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR

Query:  ELSIYLGSE
        EL+ Y+G +
Subjt:  ELSIYLGSE

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein1.2e-2752.29Show/hide
Query:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV
        S   SPCAAC +LRRKC  +CVFAP+FP D  +KF    + +GASN+ K+ + L   +R++A  SL YEA+ R  DPVYGCVG IS+L  +L+++Q DL 
Subjt:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV

Query:  DAKRELSIY
         AK ELS Y
Subjt:  DAKRELSIY

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein1.2e-2752.29Show/hide
Query:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV
        S   SPCAAC +LRRKC  +CVFAP+FP D  +KF    + +GASN+ K+ + L   +R++A  SL YEA+ R  DPVYGCVG IS+L  +L+++Q DL 
Subjt:  SCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLV

Query:  DAKRELSIY
         AK ELS Y
Subjt:  DAKRELSIY

AT2G23660.1 LOB domain-containing protein 102.8e-2955.05Show/hide
Query:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR
        +PCAAC  LRRKC  +CVFAP+FP  + +KF    R +GASN+ KI + L  D+R++   SL YEAEAR  DP+YGCVG IS L   LK+IQ DL+ AK 
Subjt:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR

Query:  ELSIYLGSE
        EL  YLG +
Subjt:  ELSIYLGSE

AT2G23660.2 LOB domain-containing protein 102.8e-2955.05Show/hide
Query:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR
        +PCAAC  LRRKC  +CVFAP+FP  + +KF    R +GASN+ KI + L  D+R++   SL YEAEAR  DP+YGCVG IS L   LK+IQ DL+ AK 
Subjt:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR

Query:  ELSIYLGSE
        EL  YLG +
Subjt:  ELSIYLGSE

AT5G66870.1 ASYMMETRIC LEAVES 2-like 11.0e-3155.05Show/hide
Query:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR
        SPCAAC +LRRKC  +CVFAP+FP D  +KF    + +GASN+ K+ + L  ++R++A  SL YEAEAR  DPVYGCVG ISIL  RLK++  DL +AK+
Subjt:  SPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDAKR

Query:  ELSIYLGSE
        EL+ Y+G +
Subjt:  ELSIYLGSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGTCAAAATCACCTCCTTCTTGCTACGGCTCACCATGCGCTGCCTGCAACTATCTGAGAAGAAAGTGCTTTTCAGATTGCGTTTTTGCGCCACATTTTCCCGC
CGATGACGCTGAAAAATTCGAAATCGCGTGCAGAACTTATGGCGCCAGTAACATCTTCAAGATTTTCAGCCGACTCCGCCACGACGAGCGCGACGAGGCCGCGGCGTCTC
TCGTCTACGAGGCGGAGGCTCGCCGGATCGATCCTGTGTACGGCTGCGTCGGTTTCATATCGATTCTTGACGACAGGCTTAAACGGATTCAATCCGATCTCGTTGATGCC
AAGAGAGAGCTCTCGATTTACTTAGGATCGGAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCGTCAAAATCACCTCCTTCTTGCTACGGCTCACCATGCGCTGCCTGCAACTATCTGAGAAGAAAGTGCTTTTCAGATTGCGTTTTTGCGCCACATTTTCCCGC
CGATGACGCTGAAAAATTCGAAATCGCGTGCAGAACTTATGGCGCCAGTAACATCTTCAAGATTTTCAGCCGACTCCGCCACGACGAGCGCGACGAGGCCGCGGCGTCTC
TCGTCTACGAGGCGGAGGCTCGCCGGATCGATCCTGTGTACGGCTGCGTCGGTTTCATATCGATTCTTGACGACAGGCTTAAACGGATTCAATCCGATCTCGTTGATGCC
AAGAGAGAGCTCTCGATTTACTTAGGATCGGAA
Protein sequenceShow/hide protein sequence
MSSSKSPPSCYGSPCAACNYLRRKCFSDCVFAPHFPADDAEKFEIACRTYGASNIFKIFSRLRHDERDEAAASLVYEAEARRIDPVYGCVGFISILDDRLKRIQSDLVDA
KRELSIYLGSE