; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011053 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011053
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP19-like
Genome locationscaffold35:3926566..3928587
RNA-Seq ExpressionMS011053
SyntenyMS011053
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]2.8e-10767.08Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I+IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LL YITQ+SN+LR+LRLVYC+ ISDEG  +AVSK+PLLEDLEI +G   F VETLET+G+C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  Y +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSDCDYADFFY
        YE    SD S  DY D ++
Subjt:  YESFWDSDVSDCDYADFFY

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.1e-10767.82Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I+IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LL YITQ+SNQLR+LRLVYC+ ISDEG  +AVSK+PLLEDLEI +G   F VETLET+G+C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSDCDYADF
        YE    SD S  DY DF
Subjt:  YESFWDSDVSDCDYADF

XP_022146724.1 putative F-box/LRR-repeat protein 23 [Momordica charantia]7.7e-11075.55Show/hide
Query:  MESNSNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGA
        MESNSNPNSEE ARNWLELP D TSMIL+KLGAVDILSNAQ VCSLWRKIC DPL+WRVVDM+NLDD L MD DLEKMCM+AVDRSCGQLVDI+IE FG 
Subjt:  MESNSNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGA

Query:  DELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR-----RKMPCDEEALAIAENMPNLH
        DELLHYI Q+SNQLRRLRLVYC DIS +G  EAV K+PLLEDLEI + F  F +ETL+TVGRCCPLL SLKL++R     R M CDEEALAIAENMPNL 
Subjt:  DELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR-----RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDI-RYDSHSHGEDY
        HL IF NSLT+ GLQAILDGCP LESLDLRHC NLNL G L  KC++RIKSL+LP+DP DD   YD+     DY
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDI-RYDSHSHGEDY

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]1.6e-10768.49Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I+IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LL YITQ+SNQLR+LRLVYC+ ISDEGF +AVSK+PLLEDLEI +G   F VETLET+G C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSD
        YE    SD SD
Subjt:  YESFWDSDVSD

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]4.3e-10867.4Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I+IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LLHYITQ+SNQLR+LRLVYC+ ISDEG  +AVSK+PLLEDLEI +G   F VETLET+G+C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSDCDYADFFY
        YE    SD S  DY D ++
Subjt:  YESFWDSDVSDCDYADFFY

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like1.1e-10163.61Show/hide
Query:  SNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELL
        SNP S ++ARNWLELP DITSMILLKLGA++ILS+AQ+VCSLWRKICKDPL+WRVVDM N+ +   MDYDLE+MC++AVDRSCG+L+DI+I++FG +ELL
Subjt:  SNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELL

Query:  HYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLN----SRRKMPCDEEALAIAENMPNLHHLQIF
         YITQ+SNQLRRLR+V C  I+D G +EAVSK+PLLE LEI      F  +TLETVGRCC LLKSLKL+     R  + CD +A+AIAENMPNL +LQIF
Subjt:  HYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLN----SRRKMPCDEEALAIAENMPNLHHLQIF

Query:  DNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY--------DSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYES
         +SLT+RGLQAILDGCPDLESLDLR CFNL+LVG LG +CAERIK LRLPHDPTDD  +        D  S  EDYP  F D D     +   D+  YE 
Subjt:  DNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY--------DSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYES

Query:  FWDSDVSDCDYADFFY
         W    +  DYADF++
Subjt:  FWDSDVSDCDYADFFY

A0A6J1CYW9 putative F-box/LRR-repeat protein 233.8e-11075.55Show/hide
Query:  MESNSNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGA
        MESNSNPNSEE ARNWLELP D TSMIL+KLGAVDILSNAQ VCSLWRKIC DPL+WRVVDM+NLDD L MD DLEKMCM+AVDRSCGQLVDI+IE FG 
Subjt:  MESNSNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGA

Query:  DELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR-----RKMPCDEEALAIAENMPNLH
        DELLHYI Q+SNQLRRLRLVYC DIS +G  EAV K+PLLEDLEI + F  F +ETL+TVGRCCPLL SLKL++R     R M CDEEALAIAENMPNL 
Subjt:  DELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR-----RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDI-RYDSHSHGEDY
        HL IF NSLT+ GLQAILDGCP LESLDLRHC NLNL G L  KC++RIKSL+LP+DP DD   YD+     DY
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDI-RYDSHSHGEDY

A0A6J1ECV6 F-box protein SKIP19-like isoform X13.9e-10767.08Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LL YITQ+SNQLR LRLVYC+ ISDEG  +AVSK+PLLEDLEI +G   F VETLET+G+C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSDCDYADFFY
        YE    SD S  DY D ++
Subjt:  YESFWDSDVSDCDYADFFY

A0A6J1EGI8 F-box protein SKIP19-like isoform X26.6e-10768.17Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LL YITQ+SNQLR LRLVYC+ ISDEG  +AVSK+PLLEDLEI +G   F VETLET+G+C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSD
        YE    SD SD
Subjt:  YESFWDSDVSD

A0A6J1ILH5 F-box protein SKIP19-like7.8e-10868.49Show/hide
Query:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        MAMESNS+PNS  E+ARNWLELP D+TSMILLKLG VDIL+NAQ+VCS WRKIC+DPL+WRVVDM+   D   MDYDLE+MC +AVDRSCGQL+ I+IEH
Subjt:  MAMESNSNPNS-EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH
        FG D+LL YITQ+SNQLR+LRLVYC+ ISDEGF +AVSK+PLLEDLEI +G   F VETLET+G C PLLKSLKLN +  R++ CD+ ALAIAENMPNL 
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSR--RKMPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC
        HLQIF NSLTNRGL+AILDGCPDLESLDLR CFNLNL G LG KC+E+IK+LRLPHDPTDD  + +        + EDY   F  SD D     + D+Y 
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSH------SHGEDYPLTFYDSDDDYDNYNNYDNYC

Query:  YESFWDSDVSD
        YE    SD SD
Subjt:  YESFWDSDVSD

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 229.3e-5846.67Show/hide
Query:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIE--HFGADELLHYI
        EE+  NW ELP D+ S ILL+L  ++IL NA+ VC  WR++ KDPLIWR +DM+NL  L  + Y +E  C   VD S G L++ +I+   F    LL+Y+
Subjt:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIE--HFGADELLHYI

Query:  TQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNS--RRKMPCDEEALAIAENMPNLHHLQIFDNSLT
         + S+ LRRLR V    I+  G  EA+ K+PLLE+LE++Y       E  +T+G+ CP LK+LKL          D +ALAIA+ MP L HLQ+  N LT
Subjt:  TQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNS--RRKMPCDEEALAIAENMPNLHHLQIFDNSLT

Query:  NRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY----DSHS----HGEDYPLTFYDSDDDYDNY
        N GL AILDGCP LE LDLR CFN+NL G L  +C ERIK  R P+D  DD  Y    D+ S     GE+     Y SDD    Y
Subjt:  NRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY----DSHS----HGEDYPLTFYDSDDDYDNY

Q9M0U7 Putative F-box protein At4g054755.3e-6146.42Show/hide
Query:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQ
        +E+  NW++LP ++T+ ILL+L   DIL NA+ +C  WR+ICKDP +WR +   NL D L  ++D E MC   VD S G L++I+IEHF +D LL YI  
Subjt:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQ

Query:  NSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK--------------MPCDEEALAIAENMPNLH
         S  L+ L +   + ++++G    + K+PLLE L I   F       L+ +G  CP LK+LKLNS                 + CD++ALAIAE+MP L 
Subjt:  NSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK--------------MPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLES-LDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY
        HLQ+  N LTN GL AILDGCP LE  LD+R CFN+NLVG L  +C +RIK LR PHD T D  Y
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLES-LDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY

Q9M0U8 Putative F-box/LRR-repeat protein 214.2e-5845.93Show/hide
Query:  EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISI-EHFGADELLHYITQ
        ++ RNW++LP ++T+ ILL+L   DIL NAQ VC  WR+ICKDP +WR +   N  D L  ++D   MC   VD S G L++I++ EHF +D LL YIT 
Subjt:  EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISI-EHFGADELLHYITQ

Query:  NSNQLRRLRLVYC-DDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK------------------MPCDEEALAIAEN
         +  LR L L  C   ++  G   A++KIPLLE LE+ +         L+ +G  CP LK+LKLNS  +                  + CD++ALAIAE+
Subjt:  NSNQLRRLRLVYC-DDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK------------------MPCDEEALAIAEN

Query:  MPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYD
        MP LHHLQ+  N LTN GL AILDGCP LE LD+R CF ++LVG L  +C E IK LR P D T D  Y+
Subjt:  MPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYD

Q9M0U9 F-box protein SKIP199.3e-7449.36Show/hide
Query:  MESNSNPNSE---EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        M S+S+P +     ++ NW ELP ++TS IL +LGA++IL NAQ VC  WR++CKDP +WR +DM NL DL  MDY+LE MC  AVDRS G LVDI I +
Subjt:  MESNSNPNSE---EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMPCDEEALAIAENMPNLHHL
        FG  +LL+YI   S+ LR LRL+ C  I+D+GF EAV K+P LE+LE+ Y    F VE+L  VG+CC  +K+LKLN   +   D++ALAIAE MP L HL
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMPCDEEALAIAENMPNLHHL

Query:  QIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYD---SDDDYDNYNNYDNYCYESFW
        Q+  N L++ GL AILD C +LE LDLR CFN+NLVG L  +C E +K +R P+D   DI   S    + Y  +  D    DDD++ Y       Y+   
Subjt:  QIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYD---SDDDYDNYNNYDNYCYESFW

Query:  DSDVSDCDYADF
         SD SD D  DF
Subjt:  DSDVSDCDYADF

Q9S9V9 Putative F-box/LRR-repeat protein 233.7e-7049.47Show/hide
Query:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQ
        +++ RNW ELP  +TS ILL+LGA++IL NAQ VC  W ++CKDP +WR +D+ N +D     YDLE MC  AVDRS G L++I I ++G ++L+ YI  
Subjt:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQ

Query:  NSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKM-----PCDEEALAIAENMPNLHHLQIFDNSL
         S+ L+ L LV C  I+DEG  +AVSK+PLLE LE+ Y    F  E+L  +GR CP LK+LKLN   ++       D+ A AIAE+MP L HLQ+  N L
Subjt:  NSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKM-----PCDEEALAIAENMPNLHHLQIFDNSL

Query:  TNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYDSDDDYDNYNNY
        TN+GL AILDGCP LE LDLR CFN+NLVG L  +C ERIK LR P+D  D    DS    ++  +T + S  +  +Y+ Y
Subjt:  TNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYDSDDDYDNYNNY

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein6.6e-7549.36Show/hide
Query:  MESNSNPNSE---EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH
        M S+S+P +     ++ NW ELP ++TS IL +LGA++IL NAQ VC  WR++CKDP +WR +DM NL DL  MDY+LE MC  AVDRS G LVDI I +
Subjt:  MESNSNPNSE---EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEH

Query:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMPCDEEALAIAENMPNLHHL
        FG  +LL+YI   S+ LR LRL+ C  I+D+GF EAV K+P LE+LE+ Y    F VE+L  VG+CC  +K+LKLN   +   D++ALAIAE MP L HL
Subjt:  FGADELLHYITQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMPCDEEALAIAENMPNLHHL

Query:  QIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYD---SDDDYDNYNNYDNYCYESFW
        Q+  N L++ GL AILD C +LE LDLR CFN+NLVG L  +C E +K +R P+D   DI   S    + Y  +  D    DDD++ Y       Y+   
Subjt:  QIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYD---SDDDYDNYNNYDNYCYESFW

Query:  DSDVSDCDYADF
         SD SD D  DF
Subjt:  DSDVSDCDYADF

AT4G05470.1 RNI-like superfamily protein3.0e-5945.93Show/hide
Query:  EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISI-EHFGADELLHYITQ
        ++ RNW++LP ++T+ ILL+L   DIL NAQ VC  WR+ICKDP +WR +   N  D L  ++D   MC   VD S G L++I++ EHF +D LL YIT 
Subjt:  EQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISI-EHFGADELLHYITQ

Query:  NSNQLRRLRLVYC-DDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK------------------MPCDEEALAIAEN
         +  LR L L  C   ++  G   A++KIPLLE LE+ +         L+ +G  CP LK+LKLNS  +                  + CD++ALAIAE+
Subjt:  NSNQLRRLRLVYC-DDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK------------------MPCDEEALAIAEN

Query:  MPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYD
        MP LHHLQ+  N LTN GL AILDGCP LE LD+R CF ++LVG L  +C E IK LR P D T D  Y+
Subjt:  MPNLHHLQIFDNSLTNRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYD

AT4G05475.1 RNI-like superfamily protein3.8e-6246.42Show/hide
Query:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQ
        +E+  NW++LP ++T+ ILL+L   DIL NA+ +C  WR+ICKDP +WR +   NL D L  ++D E MC   VD S G L++I+IEHF +D LL YI  
Subjt:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQ

Query:  NSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK--------------MPCDEEALAIAENMPNLH
         S  L+ L +   + ++++G    + K+PLLE L I   F       L+ +G  CP LK+LKLNS                 + CD++ALAIAE+MP L 
Subjt:  NSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRK--------------MPCDEEALAIAENMPNLH

Query:  HLQIFDNSLTNRGLQAILDGCPDLES-LDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY
        HLQ+  N LTN GL AILDGCP LE  LD+R CFN+NLVG L  +C +RIK LR PHD T D  Y
Subjt:  HLQIFDNSLTNRGLQAILDGCPDLES-LDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY

AT4G05490.1 RNI-like superfamily protein6.6e-5946.67Show/hide
Query:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIE--HFGADELLHYI
        EE+  NW ELP D+ S ILL+L  ++IL NA+ VC  WR++ KDPLIWR +DM+NL  L  + Y +E  C   VD S G L++ +I+   F    LL+Y+
Subjt:  EEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIE--HFGADELLHYI

Query:  TQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNS--RRKMPCDEEALAIAENMPNLHHLQIFDNSLT
         + S+ LRRLR V    I+  G  EA+ K+PLLE+LE++Y       E  +T+G+ CP LK+LKL          D +ALAIA+ MP L HLQ+  N LT
Subjt:  TQNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNS--RRKMPCDEEALAIAENMPNLHHLQIFDNSLT

Query:  NRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY----DSHS----HGEDYPLTFYDSDDDYDNY
        N GL AILDGCP LE LDLR CFN+NL G L  +C ERIK  R P+D  DD  Y    D+ S     GE+     Y SDD    Y
Subjt:  NRGLQAILDGCPDLESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRY----DSHS----HGEDYPLTFYDSDDDYDNY

AT4G05497.1 RNI-like superfamily protein5.3e-5647.14Show/hide
Query:  RNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDM---QNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQN
        RNW ELP ++TS ILL+LGA++IL NAQ VC  WR++C+DP +WR +D+   +NL + + + Y +E +C  AVD S G L++I+I++      L+YI   
Subjt:  RNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDM---QNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYITQN

Query:  SNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMP-CDEEALAIAENMPNLHHLQIFDNSLTNRGL
        S+ LRRL +V C  +   G  EA  K+PLLE+L+I Y  S    + L+ VG+ CP L++LKLN    +  CD+ ALAIAE MP L HLQ+F N L+  GL
Subjt:  SNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMP-CDEEALAIAENMPNLHHLQIFDNSLTNRGL

Query:  QAILDGCPDLESLDLRHCFNLNLVGPL
         AIL+GCP L++L L  C N+N+VG +
Subjt:  QAILDGCPDLESLDLRHCFNLNLVGPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGAGTCGAACTCGAACCCTAACTCGGAAGAGCAAGCGAGGAACTGGCTTGAACTGCCTGAAGACATCACGTCTATGATTCTGCTGAAGTTAGGCGCCGTCGA
TATCCTCTCAAATGCGCAAAACGTCTGCTCTTTGTGGCGTAAGATCTGCAAGGACCCTCTCATATGGCGTGTCGTCGATATGCAAAACTTGGACGATTTGTTGGGCATGG
ACTACGATTTGGAGAAGATGTGTATGGAGGCTGTTGACCGTAGTTGTGGCCAATTGGTCGACATCAGCATCGAGCATTTTGGCGCCGACGAGTTGCTCCACTACATCACT
CAGAATTCAAATCAACTTAGAAGACTCCGGCTTGTATATTGTGATGACATCTCAGATGAGGGATTTACTGAAGCTGTTTCAAAAATTCCATTGTTGGAGGATCTTGAAAT
AGTTTACGGTTTCAGTCCATTTTATGTAGAAACTTTGGAAACTGTTGGTCGGTGTTGCCCTCTTCTGAAATCGCTGAAACTGAACAGTCGACGAAAGATGCCATGTGATG
AGGAAGCCCTTGCTATTGCTGAAAATATGCCTAATTTGCATCACCTCCAGATATTTGACAACAGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGAT
CTGGAATCTCTTGATTTACGCCACTGTTTCAACTTGAATTTGGTGGGACCATTGGGAACTAAATGTGCTGAAAGGATCAAAAGTTTGCGCCTGCCTCATGATCCCACTGA
TGATATTCGTTATGATTCTCATTCTCATGGTGAAGATTACCCTTTAACTTTCTACGACTCCGATGATGACTACGATAACTACAACAACTACGACAACTACTGCTATGAAT
CCTTTTGGGACTCTGATGTCTCTGACTGTGACTATGCAGATTTCTTCTAT
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGAGTCGAACTCGAACCCTAACTCGGAAGAGCAAGCGAGGAACTGGCTTGAACTGCCTGAAGACATCACGTCTATGATTCTGCTGAAGTTAGGCGCCGTCGA
TATCCTCTCAAATGCGCAAAACGTCTGCTCTTTGTGGCGTAAGATCTGCAAGGACCCTCTCATATGGCGTGTCGTCGATATGCAAAACTTGGACGATTTGTTGGGCATGG
ACTACGATTTGGAGAAGATGTGTATGGAGGCTGTTGACCGTAGTTGTGGCCAATTGGTCGACATCAGCATCGAGCATTTTGGCGCCGACGAGTTGCTCCACTACATCACT
CAGAATTCAAATCAACTTAGAAGACTCCGGCTTGTATATTGTGATGACATCTCAGATGAGGGATTTACTGAAGCTGTTTCAAAAATTCCATTGTTGGAGGATCTTGAAAT
AGTTTACGGTTTCAGTCCATTTTATGTAGAAACTTTGGAAACTGTTGGTCGGTGTTGCCCTCTTCTGAAATCGCTGAAACTGAACAGTCGACGAAAGATGCCATGTGATG
AGGAAGCCCTTGCTATTGCTGAAAATATGCCTAATTTGCATCACCTCCAGATATTTGACAACAGCCTAACTAACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGAT
CTGGAATCTCTTGATTTACGCCACTGTTTCAACTTGAATTTGGTGGGACCATTGGGAACTAAATGTGCTGAAAGGATCAAAAGTTTGCGCCTGCCTCATGATCCCACTGA
TGATATTCGTTATGATTCTCATTCTCATGGTGAAGATTACCCTTTAACTTTCTACGACTCCGATGATGACTACGATAACTACAACAACTACGACAACTACTGCTATGAAT
CCTTTTGGGACTCTGATGTCTCTGACTGTGACTATGCAGATTTCTTCTAT
Protein sequenceShow/hide protein sequence
MAMESNSNPNSEEQARNWLELPEDITSMILLKLGAVDILSNAQNVCSLWRKICKDPLIWRVVDMQNLDDLLGMDYDLEKMCMEAVDRSCGQLVDISIEHFGADELLHYIT
QNSNQLRRLRLVYCDDISDEGFTEAVSKIPLLEDLEIVYGFSPFYVETLETVGRCCPLLKSLKLNSRRKMPCDEEALAIAENMPNLHHLQIFDNSLTNRGLQAILDGCPD
LESLDLRHCFNLNLVGPLGTKCAERIKSLRLPHDPTDDIRYDSHSHGEDYPLTFYDSDDDYDNYNNYDNYCYESFWDSDVSDCDYADFFY