; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011054 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011054
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP19-like
Genome locationscaffold35:3931995..3933284
RNA-Seq ExpressionMS011054
SyntenyMS011054
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]4.5e-9666.19Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA+V S I+LKLG ++ILT+AQ VC SW KIC+DP MWRV+DM   GD  DM+Y+LE MC  +V RS GQL+ INIE+FGTDDLL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
        QLR+LR+  C  ISD+GL KAV KLPLLE LEI   SF  +TL+ +GQC PLLK+LKLN QF   R +  DK ALAIAENMP L +LQIFGN LT+ GL+
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        AILDGCPDLESLDLRQCFNL LAGQLG KC+E+IK LRLPHDPTD YEF+TEI++       D  YP    D D LT+DDD
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

XP_021661102.1 F-box protein SKIP19-like [Hevea brasiliensis]5.3e-9763.21Show/hide
Query:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQ
        RNW+ELP +V ++I+ KLGAIEILTSAQ VC +W  ICKDPSMWR IDMHNLGDL DM+Y+L  MC H+V RS G LVD+NIEYFGTDDLL+YI   ++ 
Subjt:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQ

Query:  LRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQA
        L+RLR+  CY ISD+GL++   K PLLE L+I  CS S + L++VG+CCPLLK+ KLNNQ C+   +  +++ALAIAE+MP L YLQIFGN LT+ GLQA
Subjt:  LRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQA

Query:  ILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        ILDGCP LESLDLRQCFN+ + G LGK+C ERIK LR P+DPTD Y F  EI D+   GS +EDYPS F ++D L++DDD
Subjt:  ILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]3.4e-10469.82Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA++ S I+LKLGAIEIL+SAQ VC  W KICKDP MWRV+DMHN+G+  DM+Y+LE MC+ +V RS G+L+DINI+YFGT++LL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS-DKDALAIAENMPRLHYLQIFGNGLTDSGL
        QLRRLRI  C+ I+D GL++AV KLPLLEHLEI LCSF+ KTL+ VG+CC LLK+LKL+ Q C+ RGM+  D+DA+AIAENMP L YLQIFG+ LTD GL
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS-DKDALAIAENMPRLHYLQIFGNGLTDSGL

Query:  QAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYG---SHDEDYPSDFFDLDDLTEDDD
        QAILDGCPDLESLDLRQCFNL L GQLG +CAERIK LRLPHDPTD YEF   I++ D +G   S DEDYPS F D+D LTEDDD
Subjt:  QAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYG---SHDEDYPSDFFDLDDLTEDDD

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]5.9e-9666.19Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA+V S I+LKLG ++ILT+AQ VC SW KIC+DP MWRV+DM   GD  DM+Y+LE MC  +V RS GQL+ INIE+FGTDDLL YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
        QLR+LR+  C  ISD+GL KAV KLPLLE LEI   SF  +TL+ +GQC PLLK+LKLN QF   R +  DK ALAIAENMP L +LQIFGN LT+ GL+
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        AILDGCPDLESLDLRQCFNL LAGQLG KC+E+IK LRLPHDPTD YEF+TEI++       D  YP    D D LT+DDD
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]8.7e-10065.22Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWL+LPAEVMS I+LKLGAIEILTSAQ VC SW KICKDP MWRVIDM N G+L+DM+++LEIMC H+V RS GQL+DINIEYFGTD+LL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
        QLRRLR+A CYDISD+GLT+A+ +LPLLEHLEIF+ SF  +TLK VG+CCPLLK LKL  +      MV++K+ALAIAE MP+L +LQI GNGLT+ GLQ
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDP-TDGYEFTTEIIDLDCYGSHDED---------------YPSDFFDLDDLTEDDDND
        AILDGCPDLESLDLRQCF+L L GQLGK+CAER K L LPHD  T+G+E T + I    + S DED                 SDF D DD T  + +D
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDP-TDGYEFTTEIIDLDCYGSHDED---------------YPSDFFDLDDLTEDDDND

TrEMBL top hitse value%identityAlignment
A0A251JDM0 F-box domain-containing protein2.2e-9361.79Show/hide
Query:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQ
        RNW+ELP ++ ++I+LKLGA+EIL +AQ VC SW  ICKDPSMWR IDM NLGDL DM+Y+LE MC H+V RS G LVDI+I+YFGTDDLL+YI   ++ 
Subjt:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQ

Query:  LRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQA
        L+RLR+  CY ISD+GL++   K PLLE L+I  CS S + L++VG CCPLLK+ KLNN   K      +++AL IAENMP L  LQIFGN LT+ GLQA
Subjt:  LRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQA

Query:  ILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        ILDGCP+LESLDLRQCFN+ L G LGK+C ERIK LR P+DPTD Y F TEI D+   GS +EDYPS   ++D L++DDD
Subjt:  ILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

A0A6J1CXS5 F-box protein SKIP19-like1.7e-10469.82Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA++ S I+LKLGAIEIL+SAQ VC  W KICKDP MWRV+DMHN+G+  DM+Y+LE MC+ +V RS G+L+DINI+YFGT++LL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS-DKDALAIAENMPRLHYLQIFGNGLTDSGL
        QLRRLRI  C+ I+D GL++AV KLPLLEHLEI LCSF+ KTL+ VG+CC LLK+LKL+ Q C+ RGM+  D+DA+AIAENMP L YLQIFG+ LTD GL
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS-DKDALAIAENMPRLHYLQIFGNGLTDSGL

Query:  QAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYG---SHDEDYPSDFFDLDDLTEDDD
        QAILDGCPDLESLDLRQCFNL L GQLG +CAERIK LRLPHDPTD YEF   I++ D +G   S DEDYPS F D+D LTEDDD
Subjt:  QAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYG---SHDEDYPSDFFDLDDLTEDDD

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.8e-9565.84Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA+V S I+LKLG ++ILT+AQ VC SW KIC+DP MWRV+DM   GD  DM+Y+LE MC  +V RS GQL+ I IE+FGTDDLL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
        QLR LR+  C  ISD+GL KAV KLPLLE LEI   SF  +TL+ +GQC PLLK+LKLN QF   R +  DK ALAIAENMP L +LQIFGN LT+ GL+
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        AILDGCPDLESLDLRQCFNL LAGQLG KC+E+IK LRLPHDPTD YEF+TEI++       D  YP    D D LT+DDD
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.8e-9565.84Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA+V S I+LKLG ++ILT+AQ VC SW KIC+DP MWRV+DM   GD  DM+Y+LE MC  +V RS GQL+ I IE+FGTDDLL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
        QLR LR+  C  ISD+GL KAV KLPLLE LEI   SF  +TL+ +GQC PLLK+LKLN QF   R +  DK ALAIAENMP L +LQIFGN LT+ GL+
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        AILDGCPDLESLDLRQCFNL LAGQLG KC+E+IK LRLPHDPTD YEF+TEI++       D  YP    D D LT+DDD
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

A0A6J1ILH5 F-box protein SKIP19-like2.4e-9565.48Show/hide
Query:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN
        ARNWLELPA+V S I+LKLG ++ILT+AQ VC SW KIC+DP MWRV+DM   GD  DM+Y+LE MC  +V RS GQL+ INIE+FGTDDLL+YIT+S+N
Subjt:  ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
        QLR+LR+  C  ISD+G  KAV KLPLLE LEI   SF  +TL+ +G C PLLK+LKLN QF   R +  DK ALAIAENMP L +LQIFGN LT+ GL+
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        AILDGCPDLESLDLRQCFNL LAGQLG KC+E+IK LRLPHDPTD YEF+TEI++       D  YP    D D LT+DDD
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 221.7e-5848.59Show/hide
Query:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEY--FGTDDLLRYITRSTN
        NW ELP +++S+I+L+L  +EIL +A+ VC SW ++ KDP +WR IDM NL  L+ + Y +E  C H V  S G L++ NI+   F T  LL Y+   ++
Subjt:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEY--FGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
         LRRLR+     I+  G+ +A++KLPLLE LE+  CS   +  K +GQ CP LKTLKL   +       SD DALAIA+ MP L +LQ+  NGLT+ GL 
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEF
        AILDGCP LE LDLRQCFN+ L G L ++C ERIK  R P+D  D Y +
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEF

Q9M0U7 Putative F-box protein At4g054753.5e-5946.95Show/hide
Query:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL
        NW++LP E+ ++I+L+L   +IL +A+ +C +W +ICKDPSMWR I   NL D    E++ E MC H V  S G L++INIE+F +D LL YI   +  L
Subjt:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL

Query:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS----------DKDALAIAENMPRLHYLQIFGN
        + L I++   +++KG+   + KLPLLE L IF  S     LK +G  CP LKTLKLN+   +    +S          D DALAIAE+MP+L +LQ+ GN
Subjt:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS----------DKDALAIAENMPRLHYLQIFGN

Query:  GLTDSGLQAILDGCPDLES-LDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEI
        GLT++GL AILDGCP LE  LD+R+CFN+ L G L K+C +RIK LR PHD T  Y ++  +
Subjt:  GLTDSGLQAILDGCPDLES-LDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEI

Q9M0U9 F-box protein SKIP196.1e-8056.99Show/hide
Query:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL
        NW ELP E+ S I+ +LGAIEIL +AQ VC SW ++CKDPSMWR IDMHNLGDL DM+YNLEIMC H+V RS G LVDI I YFGT DLL YI   ++ L
Subjt:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL

Query:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQAI
        R LR+  C  I+D G  +AV+KLP LE LE+  CSFS ++L++VGQCC  +KTLKLN    K     +D DALAIAE MP+L +LQ+ GNGL+D+GL AI
Subjt:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQAI

Query:  LDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        LD C +LE LDLR+CFN+ L G L K+C E +K +R P+D          I D+D   S DED P DF D+D ++ DDD
Subjt:  LDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

Q9S9V8 Putative F-box/LRR-repeat protein 94.0e-5548.48Show/hide
Query:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDM---HNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRS
        RNW ELP E+ S+I+L+LGAIEIL +AQ VC SW ++C+DPSMWR ID+    NL +  ++ Y +E +C  +V  S G L++INI+Y      L YI   
Subjt:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDM---HNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRS

Query:  TNQLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEI-FLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDS
        ++ LRRL +  C  +  +G+ +A +KLPLLE L+I +  S   + LK+VGQ CP L+TLKLN   C G     DK ALAIAE MP L +LQ+F NGL+++
Subjt:  TNQLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEI-FLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDS

Query:  GLQAILDGCPDLESLDLRQCFNLKLAGQLGK
        GL AIL+GCP L++L L QC N+ + G + K
Subjt:  GLQAILDGCPDLESLDLRQCFNLKLAGQLGK

Q9S9V9 Putative F-box/LRR-repeat protein 231.2e-7251.11Show/hide
Query:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQ
        RNW ELP+++ S+I+L+LGAIEIL +AQ VC  W+++CKDPSMWR ID+ N  D    +Y+LE MC H+V RSHG L++I I Y+GT+DL+ YI   ++ 
Subjt:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQ

Query:  LRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQ---FCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSG
        L+ L +  C+ I+D+G+ KAV K+PLLE+LE+  C FS ++L+ +G+ CP LKTLKLN          G   D +A AIAE+MP L +LQ+ GNGLT+ G
Subjt:  LRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQ---FCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSG

Query:  LQAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGS--HDEDY
        L AILDGCP LE LDLRQCFN+ L G L K+C ERIK LR P+D  D  +  ++   +  +GS  ++ DY
Subjt:  LQAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGS--HDEDY

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein4.3e-8156.99Show/hide
Query:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL
        NW ELP E+ S I+ +LGAIEIL +AQ VC SW ++CKDPSMWR IDMHNLGDL DM+YNLEIMC H+V RS G LVDI I YFGT DLL YI   ++ L
Subjt:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL

Query:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQAI
        R LR+  C  I+D G  +AV+KLP LE LE+  CSFS ++L++VGQCC  +KTLKLN    K     +D DALAIAE MP+L +LQ+ GNGL+D+GL AI
Subjt:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQAI

Query:  LDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD
        LD C +LE LDLR+CFN+ L G L K+C E +K +R P+D          I D+D   S DED P DF D+D ++ DDD
Subjt:  LDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDD

AT4G05470.1 RNI-like superfamily protein2.7e-5445.08Show/hide
Query:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINI-EYFGTDDLLRYITRSTN
        RNW++LP E+ ++I+L+L   +IL +AQ VC  W +ICKDPSMWR I   N  D     ++   MC H V  S G L++IN+ E+F +D LL YIT    
Subjt:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINI-EYFGTDDLLRYITRSTN

Query:  QLRRLRIAVCYD-ISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLN--------------NQFCKGRGMVSDKDALAIAENMPRLH
         LR L + +C+  ++  G+  A+ K+PLLE LE+   S     LK +G  CP LKTLKLN              N       +  D DALAIAE+MP+LH
Subjt:  QLRRLRIAVCYD-ISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLN--------------NQFCKGRGMVSDKDALAIAENMPRLH

Query:  YLQIFGNGLTDSGLQAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEF
        +LQ+  N LT++GL AILDGCP LE LD+R+CF + L G L K+C E IK LR P D T  Y +
Subjt:  YLQIFGNGLTDSGLQAILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEF

AT4G05475.1 RNI-like superfamily protein2.5e-6046.95Show/hide
Query:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL
        NW++LP E+ ++I+L+L   +IL +A+ +C +W +ICKDPSMWR I   NL D    E++ E MC H V  S G L++INIE+F +D LL YI   +  L
Subjt:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQL

Query:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS----------DKDALAIAENMPRLHYLQIFGN
        + L I++   +++KG+   + KLPLLE L IF  S     LK +G  CP LKTLKLN+   +    +S          D DALAIAE+MP+L +LQ+ GN
Subjt:  RRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVS----------DKDALAIAENMPRLHYLQIFGN

Query:  GLTDSGLQAILDGCPDLES-LDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEI
        GLT++GL AILDGCP LE  LD+R+CFN+ L G L K+C +RIK LR PHD T  Y ++  +
Subjt:  GLTDSGLQAILDGCPDLES-LDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEI

AT4G05490.1 RNI-like superfamily protein1.2e-5948.59Show/hide
Query:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEY--FGTDDLLRYITRSTN
        NW ELP +++S+I+L+L  +EIL +A+ VC SW ++ KDP +WR IDM NL  L+ + Y +E  C H V  S G L++ NI+   F T  LL Y+   ++
Subjt:  NWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEY--FGTDDLLRYITRSTN

Query:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ
         LRRLR+     I+  G+ +A++KLPLLE LE+  CS   +  K +GQ CP LKTLKL   +       SD DALAIA+ MP L +LQ+  NGLT+ GL 
Subjt:  QLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQ

Query:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEF
        AILDGCP LE LDLRQCFN+ L G L ++C ERIK  R P+D  D Y +
Subjt:  AILDGCPDLESLDLRQCFNLKLAGQLGKKCAERIKTLRLPHDPTDGYEF

AT4G05497.1 RNI-like superfamily protein2.8e-5648.48Show/hide
Query:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDM---HNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRS
        RNW ELP E+ S+I+L+LGAIEIL +AQ VC SW ++C+DPSMWR ID+    NL +  ++ Y +E +C  +V  S G L++INI+Y      L YI   
Subjt:  RNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDM---HNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRS

Query:  TNQLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEI-FLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDS
        ++ LRRL +  C  +  +G+ +A +KLPLLE L+I +  S   + LK+VGQ CP L+TLKLN   C G     DK ALAIAE MP L +LQ+F NGL+++
Subjt:  TNQLRRLRIAVCYDISDKGLTKAVLKLPLLEHLEI-FLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDS

Query:  GLQAILDGCPDLESLDLRQCFNLKLAGQLGK
        GL AIL+GCP L++L L QC N+ + G + K
Subjt:  GLQAILDGCPDLESLDLRQCFNLKLAGQLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGAGGAACTGGCTTGAACTGCCTGCAGAAGTCATGTCCACGATTATGCTGAAGCTAGGCGCCATTGAAATCCTCACCAGCGCCCAATTCGTTTGCTTTTCGTGGAACAA
GATCTGCAAGGACCCTTCCATGTGGCGCGTCATCGATATGCACAATCTGGGTGATTTACATGACATGGAATACAATTTGGAGATCATGTGTATGCACTCTGTTTTCCGTA
GTCATGGCCAATTGGTCGACATCAACATCGAGTACTTTGGCACCGATGACTTGCTCCGTTACATCACTCGGAGCACCAATCAACTTAGAAGACTCCGGATTGCAGTTTGC
TATGACATCTCAGATAAGGGATTGACCAAAGCAGTTTTGAAACTTCCATTGTTGGAGCATCTTGAAATATTTCTCTGTTCATTTTCTGCTAAAACTTTGAAAATGGTTGG
ACAGTGTTGCCCCCTTCTGAAAACACTGAAACTGAACAACCAGTTTTGCAAGGGACGAGGGATGGTAAGCGACAAGGACGCGCTCGCTATCGCCGAAAATATGCCTAGGT
TACATTACCTTCAGATATTTGGCAATGGCCTAACGGACAGTGGCTTGCAGGCCATTCTTGATGGCTGCCCTGATTTAGAATCTCTCGACTTACGCCAGTGTTTCAACTTG
AAATTGGCGGGGCAGCTGGGGAAAAAATGTGCTGAAAGGATCAAAACTTTGCGCTTGCCTCATGATCCCACTGATGGCTATGAATTTACGACCGAAATTATTGATCTTGA
TTGTTATGGTTCTCACGATGAAGATTACCCTTCTGATTTCTTCGACCTAGATGACTTGACCGAGGACGACGATAATGACAGTGAC
mRNA sequenceShow/hide mRNA sequence
GCGAGGAACTGGCTTGAACTGCCTGCAGAAGTCATGTCCACGATTATGCTGAAGCTAGGCGCCATTGAAATCCTCACCAGCGCCCAATTCGTTTGCTTTTCGTGGAACAA
GATCTGCAAGGACCCTTCCATGTGGCGCGTCATCGATATGCACAATCTGGGTGATTTACATGACATGGAATACAATTTGGAGATCATGTGTATGCACTCTGTTTTCCGTA
GTCATGGCCAATTGGTCGACATCAACATCGAGTACTTTGGCACCGATGACTTGCTCCGTTACATCACTCGGAGCACCAATCAACTTAGAAGACTCCGGATTGCAGTTTGC
TATGACATCTCAGATAAGGGATTGACCAAAGCAGTTTTGAAACTTCCATTGTTGGAGCATCTTGAAATATTTCTCTGTTCATTTTCTGCTAAAACTTTGAAAATGGTTGG
ACAGTGTTGCCCCCTTCTGAAAACACTGAAACTGAACAACCAGTTTTGCAAGGGACGAGGGATGGTAAGCGACAAGGACGCGCTCGCTATCGCCGAAAATATGCCTAGGT
TACATTACCTTCAGATATTTGGCAATGGCCTAACGGACAGTGGCTTGCAGGCCATTCTTGATGGCTGCCCTGATTTAGAATCTCTCGACTTACGCCAGTGTTTCAACTTG
AAATTGGCGGGGCAGCTGGGGAAAAAATGTGCTGAAAGGATCAAAACTTTGCGCTTGCCTCATGATCCCACTGATGGCTATGAATTTACGACCGAAATTATTGATCTTGA
TTGTTATGGTTCTCACGATGAAGATTACCCTTCTGATTTCTTCGACCTAGATGACTTGACCGAGGACGACGATAATGACAGTGAC
Protein sequenceShow/hide protein sequence
ARNWLELPAEVMSTIMLKLGAIEILTSAQFVCFSWNKICKDPSMWRVIDMHNLGDLHDMEYNLEIMCMHSVFRSHGQLVDINIEYFGTDDLLRYITRSTNQLRRLRIAVC
YDISDKGLTKAVLKLPLLEHLEIFLCSFSAKTLKMVGQCCPLLKTLKLNNQFCKGRGMVSDKDALAIAENMPRLHYLQIFGNGLTDSGLQAILDGCPDLESLDLRQCFNL
KLAGQLGKKCAERIKTLRLPHDPTDGYEFTTEIIDLDCYGSHDEDYPSDFFDLDDLTEDDDNDSD