; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011055 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011055
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP19-like
Genome locationscaffold35:3934100..3935869
RNA-Seq ExpressionMS011055
SyntenyMS011055
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]2.8e-9571.37Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ INIE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LL YI QSSN+LR+LRLVYC+ IS +GL +AV +LPLLEDLEI  SF SF +ETL+T+G+C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.2e-9571.76Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ INIE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LL YI QSSNQLR+LRLVYC+ IS +GL +AV +LPLLEDLEI  SF SF +ETL+T+G+C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

XP_022146724.1 putative F-box/LRR-repeat protein 23 [Momordica charantia]2.4e-15598.53Show/hide
Query:  MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGT
        MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGT
Subjt:  MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGT

Query:  DELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLR
        DELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVP+LPLLEDLEIFFSFDSF METLKTVGRCCPLLNSLKLHNRNCKGPRLMGCD+EALAIAENMPNLR
Subjt:  DELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLR

Query:  HLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDLYDNLYIDSD
        HLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKC+KRIKSLQLPYDPIDDCDLYDNLYIDSD
Subjt:  HLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDLYDNLYIDSD

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]4.7e-9571.37Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ INIE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LL YI QSSNQLR+LRLVYC+ IS +G  +AV +LPLLEDLEI  SF SF +ETL+T+G C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]1.5e-9672.14Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ INIE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LLHYI QSSNQLR+LRLVYC+ IS +GL +AV +LPLLEDLEI  SF SF +ETL+T+G+C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like1.1e-9269.26Show/hide
Query:  SNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELL
        SNP S + ARNWLELPAD TSMIL+KLGA++ILS+AQ VCSLWRKIC DPLMWRVVDM N+ +  DMD DLE+MC+QAVDRSCG+L+DINI+ FGT+ELL
Subjt:  SNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELL

Query:  HYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGI
         YI QSSNQLRRLR+V CH I+  GL+EAV +LPLLE LEI  S  SF  +TL+TVGRCC LL SLKL  ++C+   ++ CD +A+AIAENMPNLR+L I
Subjt:  HYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGI

Query:  FSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        F +SLTD GLQAILDGCP LESLDLR C NL+L GQL  +CA+RIK L+LP+DP DD
Subjt:  FSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

A0A6J1CYW9 putative F-box/LRR-repeat protein 231.2e-15598.53Show/hide
Query:  MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGT
        MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGT
Subjt:  MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGT

Query:  DELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLR
        DELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVP+LPLLEDLEIFFSFDSF METLKTVGRCCPLLNSLKLHNRNCKGPRLMGCD+EALAIAENMPNLR
Subjt:  DELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLR

Query:  HLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDLYDNLYIDSD
        HLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKC+KRIKSLQLPYDPIDDCDLYDNLYIDSD
Subjt:  HLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDLYDNLYIDSD

A0A6J1ECV6 F-box protein SKIP19-like isoform X15.1e-9571.37Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ I IE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LL YI QSSNQLR LRLVYC+ IS +GL +AV +LPLLEDLEI  SF SF +ETL+T+G+C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X25.1e-9571.37Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ I IE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LL YI QSSNQLR LRLVYC+ IS +GL +AV +LPLLEDLEI  SF SF +ETL+T+G+C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

A0A6J1ILH5 F-box protein SKIP19-like2.3e-9571.37Show/hide
Query:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG
        MESNS+PNS  E ARNWLELPAD TSMIL+KLG VDIL+NAQ VCS WRKIC DPLMWRVVDMR   D  DMD DLE+MC QAVDRSCGQL+ INIE FG
Subjt:  MESNSNPNS-EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFG

Query:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL
        TD+LL YI QSSNQLR+LRLVYC+ IS +G  +AV +LPLLEDLEI  SF SF +ETL+T+G C PLL SLKL   N +  R + CD  ALAIAENMPNL
Subjt:  TDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNL

Query:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        RHL IF NSLT+ GL+AILDGCP LESLDLR C NLNL GQL  KC+++IK+L+LP+DP DD
Subjt:  RHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 221.6e-5648.03Show/hide
Query:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIE--RFGTDELLHYI
        EE   NW ELP D  S IL++L  ++IL NA+ VC  WR++  DPL+WR +DMRNL   L     +E  C   VD S G L++ NI+  RF T  LL+Y+
Subjt:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIE--RFGTDELLHYI

Query:  AQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSN
        A+ S+ LRRLR V    I+  G+ EA+ +LPLLE+LE+ +   S   E  KT+G+ CP L +LKL         L   D++ALAIA+ MP L HL + SN
Subjt:  AQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSN

Query:  SLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
         LT++GL AILDGCP+LE LDLR C N+NL G LE++C +RIK  + P D +DD
Subjt:  SLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

Q9M0U7 Putative F-box protein At4g054753.1e-5746.18Show/hide
Query:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQ
        +E   NW++LP + T+ IL++L   DIL NA+ +C  WR+IC DP MWR +   NL D L  + D E MC   VD S G L++INIE F +D LL YI  
Subjt:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQ

Query:  SSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPR---------LMGCDDEALAIAENMPNLR
         S  L+ L +     ++ KG+   + +LPLLE L IF S  S  ++ LK +G  CP L +LKL++   +            L+ CDD+ALAIAE+MP LR
Subjt:  SSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPR---------LMGCDDEALAIAENMPNLR

Query:  HLGIFSNSLTDLGLQAILDGCPYLES-LDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        HL +  N LT+ GL AILDGCP+LE  LD+R C N+NL G LEK+C KRIK L+ P+D   D
Subjt:  HLGIFSNSLTDLGLQAILDGCPYLES-LDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

Q9M0U9 F-box protein SKIP191.1e-6551.69Show/hide
Query:  MESNSNPNSE---EPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIER
        M S+S+P +      + NW ELP + TS IL +LGA++IL NAQ VC  WR++C DP MWR +DM NL D  DMD +LE MC  AVDRS G LVDI I  
Subjt:  MESNSNPNSE---EPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIER

Query:  FGTDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMP
        FGT +LL+YIA  S+ LR LRL+ C  I+  G  EAV +LP LE+LE+  S+ SF +E+L+ VG+CC  + +LKL+    K P+    DD+ALAIAE MP
Subjt:  FGTDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMP

Query:  NLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDL
         LRHL +  N L+D GL AILD C  LE LDLR C N+NL G L+K+C + +K ++ P D I D D+
Subjt:  NLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDL

Q9S9V8 Putative F-box/LRR-repeat protein 93.5e-5648.5Show/hide
Query:  RNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMR---NLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQS
        RNW ELP + TS IL++LGA++IL NAQ VC  WR++C DP MWR +D+R   NL +S+++   +E +C +AVD S G L++INI+       L+YIA  
Subjt:  RNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMR---NLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQS

Query:  SNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSNSLT
        S+ LRRL +V C  +  +G+ EA  +LPLLE+L+I +   S   + LK VG+ CP L +LKL   NC G  +  CD  ALAIAE MP LRHL +F N L+
Subjt:  SNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSNSLT

Query:  DLGLQAILDGCPYLESLDLRHCLNLNLGGQLEK
        + GL AIL+GCP+L++L L  CLN+N+ G + K
Subjt:  DLGLQAILDGCPYLESLDLRHCLNLNLGGQLEK

Q9S9V9 Putative F-box/LRR-repeat protein 239.7e-6750.39Show/hide
Query:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQ
        ++  RNW ELP+  TS IL++LGA++IL NAQ VC  W ++C DP MWR +D+ N +D      DLE MC  AVDRS G L++I I  +GT++L+ YIA 
Subjt:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQ

Query:  SSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLM----GCDDEALAIAENMPNLRHLGIF
         S+ L+ L LV C  I+ +G+A+AV ++PLLE LE+  S+  F  E+L+ +GR CP L +LKL+    + P +M    G DD A AIAE+MP LRHL + 
Subjt:  SSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLM----GCDDEALAIAENMPNLRHLGIF

Query:  SNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCD
         N LT+ GL AILDGCP+LE LDLR C N+NL G L+K+C +RIK L+ P D  DD D
Subjt:  SNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein7.6e-6751.69Show/hide
Query:  MESNSNPNSE---EPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIER
        M S+S+P +      + NW ELP + TS IL +LGA++IL NAQ VC  WR++C DP MWR +DM NL D  DMD +LE MC  AVDRS G LVDI I  
Subjt:  MESNSNPNSE---EPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIER

Query:  FGTDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMP
        FGT +LL+YIA  S+ LR LRL+ C  I+  G  EAV +LP LE+LE+  S+ SF +E+L+ VG+CC  + +LKL+    K P+    DD+ALAIAE MP
Subjt:  FGTDELLHYIAQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMP

Query:  NLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDL
         LRHL +  N L+D GL AILD C  LE LDLR C N+NL G L+K+C + +K ++ P D I D D+
Subjt:  NLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDL

AT4G05470.1 RNI-like superfamily protein2.6e-5143.35Show/hide
Query:  RNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINI-ERFGTDELLHYIAQSSN
        RNW++LP + T+ IL++L   DIL NAQ VC  WR+IC DP MWR ++ R   D L  + D   MC   VD S G L++IN+ E F +D LL YI  +  
Subjt:  RNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINI-ERFGTDELLHYIAQSSN

Query:  QLRRLRLVYCHD-ISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRL-------------MGCDDEALAIAENMPN
         LR L L  C   ++  G+  A+ ++PLLE LE+  S        LK +G  CP L +LKL++     P               + CDD+ALAIAE+MP 
Subjt:  QLRRLRLVYCHD-ISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRL-------------MGCDDEALAIAENMPN

Query:  LRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        L HL + +N LT+ GL AILDGCP+LE LD+R C  ++L G LEK+C + IK L+ P D   D
Subjt:  LRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

AT4G05475.1 RNI-like superfamily protein2.2e-5846.18Show/hide
Query:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQ
        +E   NW++LP + T+ IL++L   DIL NA+ +C  WR+IC DP MWR +   NL D L  + D E MC   VD S G L++INIE F +D LL YI  
Subjt:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQ

Query:  SSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPR---------LMGCDDEALAIAENMPNLR
         S  L+ L +     ++ KG+   + +LPLLE L IF S  S  ++ LK +G  CP L +LKL++   +            L+ CDD+ALAIAE+MP LR
Subjt:  SSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPR---------LMGCDDEALAIAENMPNLR

Query:  HLGIFSNSLTDLGLQAILDGCPYLES-LDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
        HL +  N LT+ GL AILDGCP+LE  LD+R C N+NL G LEK+C KRIK L+ P+D   D
Subjt:  HLGIFSNSLTDLGLQAILDGCPYLES-LDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

AT4G05490.1 RNI-like superfamily protein1.1e-5748.03Show/hide
Query:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIE--RFGTDELLHYI
        EE   NW ELP D  S IL++L  ++IL NA+ VC  WR++  DPL+WR +DMRNL   L     +E  C   VD S G L++ NI+  RF T  LL+Y+
Subjt:  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIE--RFGTDELLHYI

Query:  AQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSN
        A+ S+ LRRLR V    I+  G+ EA+ +LPLLE+LE+ +   S   E  KT+G+ CP L +LKL         L   D++ALAIA+ MP L HL + SN
Subjt:  AQSSNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSN

Query:  SLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD
         LT++GL AILDGCP+LE LDLR C N+NL G LE++C +RIK  + P D +DD
Subjt:  SLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDD

AT4G05497.1 RNI-like superfamily protein2.5e-5748.5Show/hide
Query:  RNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMR---NLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQS
        RNW ELP + TS IL++LGA++IL NAQ VC  WR++C DP MWR +D+R   NL +S+++   +E +C +AVD S G L++INI+       L+YIA  
Subjt:  RNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMR---NLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQS

Query:  SNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSNSLT
        S+ LRRL +V C  +  +G+ EA  +LPLLE+L+I +   S   + LK VG+ CP L +LKL   NC G  +  CD  ALAIAE MP LRHL +F N L+
Subjt:  SNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSNSLT

Query:  DLGLQAILDGCPYLESLDLRHCLNLNLGGQLEK
        + GL AIL+GCP+L++L L  CLN+N+ G + K
Subjt:  DLGLQAILDGCPYLESLDLRHCLNLNLGGQLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAACTCGAACCCTAACTCGGAAGAGCCAGCGAGGAACTGGCTTGAGCTGCCTGCAGACACAACGTCTATGATTCTGATGAAGTTAGGCGCCGTCGATATCCT
CTCCAATGCGCAAATCGTCTGCTCTTTGTGGCGTAAGATCTGCTACGACCCTCTCATGTGGCGTGTCGTCGATATGAGAAATTTGGATGATTCGTTGGACATGGACAAGG
ATTTGGAGAAGATGTGTATGCAGGCTGTTGATCGTAGTTGTGGCCAATTGGTTGACATCAATATTGAGCGTTTTGGCACCGACGAGTTGCTCCACTATATCGCTCAGAGT
TCAAATCAACTTAGAAGACTCCGGCTTGTATATTGTCATGACATCTCAGGTAAGGGATTGGCTGAAGCAGTTCCAAGACTTCCATTGTTAGAGGATCTTGAAATATTTTT
CAGTTTCGATTCATTTCATATGGAAACTCTGAAAACTGTTGGTCGATGTTGCCCTCTTTTGAATTCACTGAAACTGCACAATCGGAATTGCAAAGGACCTCGACTGATGG
GATGTGATGATGAAGCCCTTGCTATTGCTGAAAACATGCCTAATTTACGTCACCTTGGGATATTTAGCAATAGCCTAACCGACTTGGGCTTGCAGGCCATTCTTGATGGT
TGTCCCTATTTAGAATCTCTTGATTTACGCCACTGTCTCAATTTGAATTTGGGGGGACAGTTGGAAAAAAAATGTGCTAAAAGGATCAAAAGTTTGCAGCTGCCTTATGA
TCCCATTGATGACTGTGATTTATATGACAACCTCTATATTGATAGCGAC
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGAACTCGAACCCTAACTCGGAAGAGCCAGCGAGGAACTGGCTTGAGCTGCCTGCAGACACAACGTCTATGATTCTGATGAAGTTAGGCGCCGTCGATATCCT
CTCCAATGCGCAAATCGTCTGCTCTTTGTGGCGTAAGATCTGCTACGACCCTCTCATGTGGCGTGTCGTCGATATGAGAAATTTGGATGATTCGTTGGACATGGACAAGG
ATTTGGAGAAGATGTGTATGCAGGCTGTTGATCGTAGTTGTGGCCAATTGGTTGACATCAATATTGAGCGTTTTGGCACCGACGAGTTGCTCCACTATATCGCTCAGAGT
TCAAATCAACTTAGAAGACTCCGGCTTGTATATTGTCATGACATCTCAGGTAAGGGATTGGCTGAAGCAGTTCCAAGACTTCCATTGTTAGAGGATCTTGAAATATTTTT
CAGTTTCGATTCATTTCATATGGAAACTCTGAAAACTGTTGGTCGATGTTGCCCTCTTTTGAATTCACTGAAACTGCACAATCGGAATTGCAAAGGACCTCGACTGATGG
GATGTGATGATGAAGCCCTTGCTATTGCTGAAAACATGCCTAATTTACGTCACCTTGGGATATTTAGCAATAGCCTAACCGACTTGGGCTTGCAGGCCATTCTTGATGGT
TGTCCCTATTTAGAATCTCTTGATTTACGCCACTGTCTCAATTTGAATTTGGGGGGACAGTTGGAAAAAAAATGTGCTAAAAGGATCAAAAGTTTGCAGCTGCCTTATGA
TCCCATTGATGACTGTGATTTATATGACAACCTCTATATTGATAGCGAC
Protein sequenceShow/hide protein sequence
MESNSNPNSEEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSLDMDKDLEKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQS
SNQLRRLRLVYCHDISGKGLAEAVPRLPLLEDLEIFFSFDSFHMETLKTVGRCCPLLNSLKLHNRNCKGPRLMGCDDEALAIAENMPNLRHLGIFSNSLTDLGLQAILDG
CPYLESLDLRHCLNLNLGGQLEKKCAKRIKSLQLPYDPIDDCDLYDNLYIDSD