; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011058 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011058
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP19-like
Genome locationscaffold35:3949476..3951490
RNA-Seq ExpressionMS011058
SyntenyMS011058
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]2.7e-11870.83Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI INI++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LLQYITQSSN+LR+LR++ C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYE+  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDYADFYF
        GS+FSDY D YF
Subjt:  GSNFSDYADFYF

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.1e-11871.61Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI INI++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LLQYITQSSNQLR+LR++ C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDYADF
        GS+FSDY DF
Subjt:  GSNFSDYADF

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]2.0e-17799.68Show/hide
Query:  MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
Subjt:  MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLRRLRI+RCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
Subjt:  LQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYADFYFD
        SDYADFYFD
Subjt:  SDYADFYFD

XP_022925897.1 F-box protein SKIP19-like isoform X1 [Cucurbita moschata]4.6e-11871.15Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI I I++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LLQYITQSSNQLR LR++ C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDYADFYF
        GS+FSDY D YF
Subjt:  GSNFSDYADFYF

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]2.1e-11871.15Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI INI++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LL YITQSSNQLR+LR++ C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDYADFYF
        GS+FSDY D YF
Subjt:  GSNFSDYADFYF

TrEMBL top hitse value%identityAlignment
A0A5A7UDI0 F-box protein SKIP19-like isoform X14.6e-10866.77Show/hide
Query:  SNPISGD-EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM-HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        SNP S + E+RNWLELP D+TSMIL KLG +EIL+ AQ VCS WRKIC+DPLMWRV+DM +    WDMDYDLE+MC QAV RSCGELI INI++FGT++L
Subjt:  SNPISGD-EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM-HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        L+YITQS NQL RLR++ C+ I+D GL EAVSKLPLLE LE+S CSF  +TL T+G+ C  LKSLKL+ Q  RR  ++CD+ A+AIA+NMPNLR+L IFG
Subjt:  LQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDE--DYPSGFSDIDFLTEDDDYYEWSGGS
        ++LT+RGL+AIL GC  LESLDLRQCFNL+L GQLG +C+E+IK LRLPHDPTDD EF  E     DDD+ D+  DYP G SD D LT+DDDYYE+SGGS
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDE--DYPSGFSDIDFLTEDDDYYEWSGGS

Query:  NFSDYADFYF
        +FSDY D YF
Subjt:  NFSDYADFYF

A0A6J1CXS5 F-box protein SKIP19-like9.5e-17899.68Show/hide
Query:  MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
Subjt:  MESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLRRLRI+RCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
Subjt:  LQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYADFYFD
        SDYADFYFD
Subjt:  SDYADFYFD

A0A6J1ECV6 F-box protein SKIP19-like isoform X12.2e-11871.15Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI I I++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LLQYITQSSNQLR LR++ C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDYADFYF
        GS+FSDY D YF
Subjt:  GSNFSDYADFYF

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.6e-11671.34Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI I I++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LLQYITQSSNQLR LR++ C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDY
        GS+FSDY
Subjt:  GSNFSDY

A0A6J1ILH5 F-box protein SKIP19-like7.1e-11771.34Show/hide
Query:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG
        MESN  P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+ WDMDYDLE+MC QAVDRSCG+LI INI++FG
Subjt:  MESN--PIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFG

Query:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL
        T++LLQYITQSSNQLR+LR++ C+ I+D G  +AVSKLPLLE LEIS  SF  +TLET+G C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+L
Subjt:  TNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYL

Query:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG
        QIFG+SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SG
Subjt:  QIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSG

Query:  GSNFSDY
        GS+FSDY
Subjt:  GSNFSDY

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 225.9e-6044.48Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ
        ++  NW ELP D+ S ILL+L  +EIL +A+ VC  WR++ KDPL+WR +DM N+      Y +E  C   VD S G L++ NI    F T  LL Y+ +
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ

Query:  SSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR
         S+ LRRLR+ +   IT  G+ EA+ KLPLLE LE+  CS  E+  +T+G+ C  LK+LKL        + + D DA+AIA+ MP L +LQ+  + LT+ 
Subjt:  SSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR

Query:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF
        GL AILDGCP LE LDLRQCFN++L G L  +C ERIK  R P+D  DDY +++ +D    +D     +E+Y  G  D ++
Subjt:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF

Q9M0U7 Putative F-box protein At4g054752.0e-5543.35Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        +E  NW++LP ++T+ ILL+L   +IL +A+ +C  WR+ICKDP MWR +++ +   +  ++D E MC   VD S G L++INI++F ++ LL YI   S
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI
          L+ L I     +T+ G+   + KLPLLE L I   S  +  L+ +G  C  LK+LKL+                 +++CD DA+AIAE+MP LR+LQ+
Subjt:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI

Query:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV
         G+ LT+ GL AILDGCP LE  LD+R+CFN++LVG L   C +RIK LR PHD T DY + +
Subjt:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV

Q9M0U9 F-box protein SKIP195.7e-7953.47Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        E+ NW ELP ++TS IL +LGAIEIL +AQ VC  WR++CKDP MWR +DMHN+G+  DMDY+LE MC  AVDRS G L+DI I YFGT +LL YI   S
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL
        + LR LR++RC  ITD G  EAV KLP LE LE+S CSF+ ++L  VG+CC  +K+LKL+    +    + D DA+AIAE MP LR+LQ+ G+ L+D GL
Subjt:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL

Query:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD
         AILD C +LE LDLR+CFN++LVG L   C E +K +R P+D   D +            S DED P  FSDID ++ DDD   YY++SG S+FSDY  
Subjt:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD

Query:  FYF
        F F
Subjt:  FYF

Q9S9V8 Putative F-box/LRR-repeat protein 93.1e-5345.68Show/hide
Query:  SSPMESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQ
        SSP      +G E RNW ELP ++TS ILL+LGAIEIL +AQ VC  WR++C+DP MWR +D+    + +   ++ Y +E +C +AVD S G L++INI 
Subjt:  SSPMESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQ

Query:  YFGTNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPN
        Y      L YI   S+ LRRL ++ C  +   G+ EA  KLPLLE L+I+   S  E+ L+ VG+ C  L++LKL+C      +  CD+ A+AIAE MP 
Subjt:  YFGTNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPN

Query:  LRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQL
        LR+LQ+F + L++ GL AIL+GCP L++L L QC N+++VG +
Subjt:  LRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQL

Q9S9V9 Putative F-box/LRR-repeat protein 239.7e-7149.15Show/hide
Query:  SSPMESNPI----SGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINI
        SS + S P+       + RNW ELP+ +TS ILL+LGAIEIL +AQ VC  W ++CKDP MWR +D+ N  +     YDLE MC  AVDRS G LI+I I
Subjt:  SSPMESNPI----SGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINI

Query:  QYFGTNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLD-CQDCRRGMIDCDRDAIAIAENMP
         Y+GTN+L+ YI   S+ L+ L ++RC  ITD G+++AVSK+PLLE+LE+S C F+ ++L  +GR C  LK+LKL+   +        D +A AIAE+MP
Subjt:  QYFGTNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLD-CQDCRRGMIDCDRDAIAIAENMP

Query:  NLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDF
         LR+LQ+ G+ LT++GL AILDGCP LE LDLRQCFN++LVG L   C ERIK LR P+D  DD +        G D+     + S F++ D+
Subjt:  NLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDF

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein4.0e-8053.47Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        E+ NW ELP ++TS IL +LGAIEIL +AQ VC  WR++CKDP MWR +DMHN+G+  DMDY+LE MC  AVDRS G L+DI I YFGT +LL YI   S
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL
        + LR LR++RC  ITD G  EAV KLP LE LE+S CSF+ ++L  VG+CC  +K+LKL+    +    + D DA+AIAE MP LR+LQ+ G+ L+D GL
Subjt:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL

Query:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD
         AILD C +LE LDLR+CFN++LVG L   C E +K +R P+D   D +            S DED P  FSDID ++ DDD   YY++SG S+FSDY  
Subjt:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD

Query:  FYF
        F F
Subjt:  FYF

AT4G05470.1 RNI-like superfamily protein2.7e-5243.4Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINI-QYFGTNELLQYITQSS
        E RNW++LP ++T+ ILL+L   +IL +AQ VC  WR+ICKDP MWR ++  +   +  ++D   MC   VD S G L++IN+ ++F ++ LL YIT   
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINI-QYFGTNELLQYITQSS

Query:  NQLRRLRILRCH-SITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKL----------DCQDCR----RGMIDCDRDAIAIAENMPNL
          LR L +  C   +T  G+  A++K+PLLE LE++  S  +  L+ +G  C  LK+LKL          D  D       G ++CD DA+AIAE+MP L
Subjt:  NQLRRLRILRCH-SITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKL----------DCQDCR----RGMIDCDRDAIAIAENMPNL

Query:  RYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEF
         +LQ+  + LT+ GL AILDGCP LE LD+R+CF + LVG L   C E IK LR P D T DY +
Subjt:  RYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEF

AT4G05475.1 RNI-like superfamily protein1.4e-5643.35Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        +E  NW++LP ++T+ ILL+L   +IL +A+ +C  WR+ICKDP MWR +++ +   +  ++D E MC   VD S G L++INI++F ++ LL YI   S
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI
          L+ L I     +T+ G+   + KLPLLE L I   S  +  L+ +G  C  LK+LKL+                 +++CD DA+AIAE+MP LR+LQ+
Subjt:  NQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI

Query:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV
         G+ LT+ GL AILDGCP LE  LD+R+CFN++LVG L   C +RIK LR PHD T DY + +
Subjt:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV

AT4G05490.1 RNI-like superfamily protein4.2e-6144.48Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ
        ++  NW ELP D+ S ILL+L  +EIL +A+ VC  WR++ KDPL+WR +DM N+      Y +E  C   VD S G L++ NI    F T  LL Y+ +
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ

Query:  SSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR
         S+ LRRLR+ +   IT  G+ EA+ KLPLLE LE+  CS  E+  +T+G+ C  LK+LKL        + + D DA+AIA+ MP L +LQ+  + LT+ 
Subjt:  SSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR

Query:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF
        GL AILDGCP LE LDLRQCFN++L G L  +C ERIK  R P+D  DDY +++ +D    +D     +E+Y  G  D ++
Subjt:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF

AT4G05497.1 RNI-like superfamily protein2.2e-5445.68Show/hide
Query:  SSPMESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQ
        SSP      +G E RNW ELP ++TS ILL+LGAIEIL +AQ VC  WR++C+DP MWR +D+    + +   ++ Y +E +C +AVD S G L++INI 
Subjt:  SSPMESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQ

Query:  YFGTNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPN
        Y      L YI   S+ LRRL ++ C  +   G+ EA  KLPLLE L+I+   S  E+ L+ VG+ C  L++LKL+C      +  CD+ A+AIAE MP 
Subjt:  YFGTNELLQYITQSSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPN

Query:  LRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQL
        LR+LQ+F + L++ GL AIL+GCP L++L L QC N+++VG +
Subjt:  LRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTCTTCTCCCATGGAGTCGAACCCCATCTCCGGAGACGAAGCGAGGAACTGGCTTGAACTGCCTGCAGACATCACGTCCATGATTCTTCTCAAGCTAGGCGCCATTGA
AATCCTCTCGAGCGCGCAGAGCGTCTGCTCTTTGTGGCGTAAGATCTGTAAGGACCCTCTCATGTGGCGTGTCGTCGATATGCACAACATGGGTGAGTGGGACATGGACT
ACGATTTGGAGCAGATGTGCATTCAGGCTGTTGACCGTAGTTGTGGCGAACTGATCGACATCAACATTCAGTACTTTGGCACCAATGAGTTGCTCCAATATATCACTCAG
AGTTCAAATCAACTTAGAAGACTCCGGATTTTACGTTGTCATAGCATCACGGATACAGGATTGTCTGAAGCAGTTTCGAAACTTCCATTGTTGGAACATCTTGAAATATC
TCTCTGTTCGTTTACAGAGAAAACTTTGGAAACCGTTGGACGGTGTTGCCGTCTTCTGAAATCATTAAAACTTGACTGTCAGGATTGCAGAAGAGGAATGATTGATTGTG
ATAGGGATGCCATTGCCATTGCTGAAAATATGCCTAATTTACGTTACCTTCAGATATTTGGAAGCAGTCTAACGGACAGGGGCTTGCAAGCCATTCTTGACGGTTGTCCT
GATTTAGAATCCCTTGATTTGCGTCAGTGTTTCAATTTAGATTTGGTTGGACAATTGGGGGTAGAATGTGCTGAAAGGATTAAACATTTGCGCTTGCCTCATGATCCCAC
GGATGACTATGAATTTATTGTCGAAACTGATGGTTTTGGTGATGATGATTCTCTTGATGAAGATTATCCTTCCGGTTTCTCTGACATTGATTTCTTGACTGAAGATGATG
ATTACTATGAATGGTCAGGAGGCAGCAACTTCTCGGACTATGCGGATTTTTACTTTGAT
mRNA sequenceShow/hide mRNA sequence
GTTTCTTCTCCCATGGAGTCGAACCCCATCTCCGGAGACGAAGCGAGGAACTGGCTTGAACTGCCTGCAGACATCACGTCCATGATTCTTCTCAAGCTAGGCGCCATTGA
AATCCTCTCGAGCGCGCAGAGCGTCTGCTCTTTGTGGCGTAAGATCTGTAAGGACCCTCTCATGTGGCGTGTCGTCGATATGCACAACATGGGTGAGTGGGACATGGACT
ACGATTTGGAGCAGATGTGCATTCAGGCTGTTGACCGTAGTTGTGGCGAACTGATCGACATCAACATTCAGTACTTTGGCACCAATGAGTTGCTCCAATATATCACTCAG
AGTTCAAATCAACTTAGAAGACTCCGGATTTTACGTTGTCATAGCATCACGGATACAGGATTGTCTGAAGCAGTTTCGAAACTTCCATTGTTGGAACATCTTGAAATATC
TCTCTGTTCGTTTACAGAGAAAACTTTGGAAACCGTTGGACGGTGTTGCCGTCTTCTGAAATCATTAAAACTTGACTGTCAGGATTGCAGAAGAGGAATGATTGATTGTG
ATAGGGATGCCATTGCCATTGCTGAAAATATGCCTAATTTACGTTACCTTCAGATATTTGGAAGCAGTCTAACGGACAGGGGCTTGCAAGCCATTCTTGACGGTTGTCCT
GATTTAGAATCCCTTGATTTGCGTCAGTGTTTCAATTTAGATTTGGTTGGACAATTGGGGGTAGAATGTGCTGAAAGGATTAAACATTTGCGCTTGCCTCATGATCCCAC
GGATGACTATGAATTTATTGTCGAAACTGATGGTTTTGGTGATGATGATTCTCTTGATGAAGATTATCCTTCCGGTTTCTCTGACATTGATTTCTTGACTGAAGATGATG
ATTACTATGAATGGTCAGGAGGCAGCAACTTCTCGGACTATGCGGATTTTTACTTTGAT
Protein sequenceShow/hide protein sequence
VSSPMESNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQ
SSNQLRRLRILRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCP
DLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSDYADFYFD