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MS011067 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011067
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L37a
Genome locationscaffold35:4084964..4085242
RNA-Seq ExpressionMS011067
SyntenyMS011067
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7576786.1 Ribosomal protein L37ae, partial [Arabidopsis thaliana x Arabidopsis arenosa]3.9e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GKMKAGGAYT+N ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

Q9XHE4.1 RecName: Full=60S ribosomal protein L37a [Gossypium hirsutum]5.1e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

XP_002268650.1 PREDICTED: 60S ribosomal protein L37a [Vitis vinifera]3.9e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMRV--RTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMRV--RTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

XP_002882705.1 60S ribosomal protein L37a-1 [Arabidopsis lyrata subsp. lyrata]2.3e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ SNYF + C KYA+KRKAV +      GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

XP_010055398.1 60S ribosomal protein L37a [Eucalyptus grandis]6.7e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

TrEMBL top hitse value%identityAlignment
A0A1U7XSD1 60S ribosomal protein L37a3.3e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

A0A1U8I345 60S ribosomal protein L37a-like2.5e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMR--VRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMR--VRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

A0A6J1ICH2 60S ribosomal protein L37a3.3e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

D7L9S8 60S ribosomal protein L37a1.1e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ SNYF + C KYA+KRKAV +      GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

F6GVD3 Uncharacterized protein1.9e-2272.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMRV--RTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMRV--RTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-19.7e-2469.57Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C K+A+KRKAV +      GK+KAGGAYT+N ASA+TVRST+RRLREQT++
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

P0DKK2 60S ribosomal protein L37a-29.7e-2469.57Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C K+A+KRKAV +      GK+KAGGAYT+N ASA+TVRST+RRLREQT++
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

Q9SRK6 Putative 60S ribosomal protein L37a-12.2e-2368.48Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ + YF + C KY++KRK V +      GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

Q9XHE4 60S ribosomal protein L37a6.7e-2572.83Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S YF + C KYA+KRKAV +      GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

Q9ZRS8 60S ribosomal protein L37a8.2e-2369.23Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTK
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ S +F + C K+A+KRKAV +      GK+KAGGAYTLN  SA+TVRST+RRLREQT+
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTK

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein1.5e-2468.48Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS
        M KRTKKA IV KY TRYGASLR QIKKMEVSQ + YF + C KY++KRK V +      GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

AT3G60245.1 Zinc-binding ribosomal protein family protein1.7e-2368.54Show/hide
Query:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQ
        M KRTKK  IV KY TRYGAS+R QIKKMEVSQ S YF + C KY +KRKAV +      GK+KAGGAYT+N ASA+TVRST+RRLREQ
Subjt:  MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDM--RVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAGATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGCCAGCAAAGCAATTA
CTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTGATATGCGTGTAAGGACTGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTG
CCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAGATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGCCAGCAAAGCAATTA
CTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTGATATGCGTGTAAGGACTGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTG
CCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC
Protein sequenceShow/hide protein sequence
MRKRTKKAVIVRKYSTRYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVDMRVRTGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS