; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011095 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011095
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPolymorphic antigen
Genome locationscaffold35:4409441..4409671
RNA-Seq ExpressionMS011095
SyntenyMS011095
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49502.1 hypothetical protein Csa_002734 [Cucumis sativus]2.1e-1674.36Show/hide
Query:  WLSPNAYTPKYPSVSQRNEKRKKREEQNLFLPLS--PIASSL-PPLLSL-VSSDLGHRFIAFI-SGSRVLPVAGTCRR
        WLSPNAYTPKYPS SQ   + +KREEQNLFLPLS  PIASSL PPL SL VSSDLGHRF AF+   S +LPVAG CRR
Subjt:  WLSPNAYTPKYPSVSQRNEKRKKREEQNLFLPLS--PIASSL-PPLLSL-VSSDLGHRFIAFI-SGSRVLPVAGTCRR
TrEMBL top hitse value%identityAlignment
A0A0A0KMB8 Polymorphic antigen1.0e-1674.36Show/hide
Query:  WLSPNAYTPKYPSVSQRNEKRKKREEQNLFLPLS--PIASSL-PPLLSL-VSSDLGHRFIAFI-SGSRVLPVAGTCRR
        WLSPNAYTPKYPS SQ   + +KREEQNLFLPLS  PIASSL PPL SL VSSDLGHRF AF+   S +LPVAG CRR
Subjt:  WLSPNAYTPKYPSVSQRNEKRKKREEQNLFLPLS--PIASSL-PPLLSL-VSSDLGHRFIAFI-SGSRVLPVAGTCRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCTCTCCCCGAATGCGTACACCCCAAAATACCCTTCTGTCTCACAGAGAAATGAGAAACGAAAAAAAAGGGAAGAGCAAAATCTCTTTCTCCCACTCTCCCCCATCGC
TTCTTCTCTCCCCCCTCTCCTCTCTCTCGTTTCCTCTGATTTAGGGCATCGCTTCATAGCGTTTATTTCTGGGAGTCGTGTTCTACCTGTTGCAGGTACTTGCCGGAGAG
AAATA
mRNA sequenceShow/hide mRNA sequence
TGGCTCTCCCCGAATGCGTACACCCCAAAATACCCTTCTGTCTCACAGAGAAATGAGAAACGAAAAAAAAGGGAAGAGCAAAATCTCTTTCTCCCACTCTCCCCCATCGC
TTCTTCTCTCCCCCCTCTCCTCTCTCTCGTTTCCTCTGATTTAGGGCATCGCTTCATAGCGTTTATTTCTGGGAGTCGTGTTCTACCTGTTGCAGGTACTTGCCGGAGAG
AAATA
Protein sequenceShow/hide protein sequence
WLSPNAYTPKYPSVSQRNEKRKKREEQNLFLPLSPIASSLPPLLSLVSSDLGHRFIAFISGSRVLPVAGTCRREI