CuGenDBv2

Gene ID	MS011100
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	scaffold35:4442992..4444506
RNA-Seq Expression	MS011100
Synteny	MS011100
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0071577 - zinc ion transmembrane transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component) GO:0005385 - zinc ion transmembrane transporter activity (molecular function)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

1.5e-39

87.74

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MA+VIMKFF ASLFMWITPI LL+GFNHN IPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDP FLAEAKA INQS G+AD PSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  -NKKED
         NKKE+
Subjt:  -NKKED

XP_022146488.1 uncharacterized protein LOC111015696 [Momordica charantia]

9.5e-47

99.05

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKA INQSAGEADDPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
        NKKED
Subjt:  NKKED

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

1.3e-40

87.62

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKA INQS G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

1.1e-39

85.71

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKA INQ+ G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

6.0e-41

87.27

Show/hide

Query:  LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADD
        LK+ MASVI KFF ASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAFL EAKA INQS G+ ++
Subjt:  LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADD

Query:  PSQA-NKKED
        PSQA NKKE+
Subjt:  PSQA-NKKED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.4e-40

86.36

Show/hide

Query:  LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADD
        L+V MA+VIMKFF ASLFMWITPI LL+GFNHN IPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDP FLAEAKA INQS G+AD 
Subjt:  LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADD

Query:  PSQA-NKKED
        PSQA NKKE+
Subjt:  PSQA-NKKED

A0A5A7UE48 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.6e-39

83.64

Show/hide

Query:  LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADD
        L+V MA+VI KFF ASLFMWITPI LL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEP+SKHEPDPAFLAEAKA INQS G+AD 
Subjt:  LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADD

Query:  PSQA-NKKED
        PS+A NKKE+
Subjt:  PSQA-NKKED

A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.6e-47

99.05

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKA INQSAGEADDPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
        NKKED
Subjt:  NKKED

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

6.5e-41

87.62

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKA INQS G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

5.5e-40

85.71

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKA INQ+ G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

2.3e-30

64.15

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQ-SAGEADDPSQ
        MA V+ KF  AS+FMWI P+A+LYGFNHNL+PGST L+PHSL LLSGFLAV+SVN VI  YI MAMKEPA KH+PD AFLAEAK  +N+ + G       
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQ-SAGEADDPSQ

Query:  ANKKED
        A KK++
Subjt:  ANKKED

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

1.2e-28

Show/hide

Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA
        MA V+ KF  AS+FMWI PIA+LYGFN++L+PGST L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEPA KH+PD +F+AEAK  + +      +   A
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQA

Query:  NKKED
         KK++
Subjt:  NKKED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TTGAAGGTACGAATGGCAAGCGTCATAATGAAGTTCTTCACTGCATCACTGTTTATGTGGATAACCCCCATCGCGTTGTTATATGGTTTTAACCATAATTTGATTCCTGG
TTCAACACAATTGAATCCACATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATCGCCATTTATATTATAATGGCAATGAAAGAACCCG
CTAGTAAACACGAACCAGATCCTGCATTTCTTGCTGAGGCGAAAGCTGGTATAAACCAGTCTGCTGGGGAAGCAGATGACCCCTCGCAAGCTAATAAGAAGGAAGAT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

LKVRMASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKAGINQSAGEADDPSQANKKED

MS011100 (gene) of Bitter gourd (TR) v1 genome