; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011104 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011104
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVQ domain-containing protein
Genome locationscaffold35:4462817..4463371
RNA-Seq ExpressionMS011104
SyntenyMS011104
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052442.1 VQ domain-containing protein [Cucumis melo var. makuwa]5.4e-5064.95Show/hide
Query:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG
        MS+TSDQW  QFY    HG A  S+A+ H G    ++N+ SKP RRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLG+HKGPVNLSFG  G
Subjt:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG

Query:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
        D+ LH  NHP  SVMLPFSD R    RQ P E +F    E+     +G S P +EL+EI+NL+DE  DL+YDLQEL MEFSSS+GNGNYGGGYF
Subjt:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

KAG6581510.1 hypothetical protein SDJN03_21512, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4766.3Show/hide
Query:  MSVTSDQW-PQFY-HGGA-DSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTL
        +S +SDQW  QFY HGGA  STA+P     N +    RRRSRASRKAPTTLLNASTANFRDLVQQFTGF AAGA VP G+HKGPVNLSFG  GDE  H  
Subjt:  MSVTSDQW-PQFY-HGGA-DSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTL

Query:  NHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGN
        NHP  SVMLPFSD RHF  R+ P EH    P  NR     G S  A+EL+EIQNL+DE  DLNYDL+EL MEF SS+GNGN
Subjt:  NHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGN

XP_008441071.1 PREDICTED: uncharacterized protein LOC103485295 [Cucumis melo]8.3e-5165.46Show/hide
Query:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG
        MS+TSDQW  QFY    HGGA  S+A+ H G    ++N+ SKP RRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLG+HKGPVNLSFG  G
Subjt:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG

Query:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
        D+ LH  NHP  SVMLPFSD R    RQ P E +F    E+     +G S P +EL+EI+NL+DE  DL+YDLQEL MEFSSS+GNGNYGGGYF
Subjt:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

XP_022146640.1 uncharacterized protein LOC111015794 [Momordica charantia]2.3e-101100Show/hide
Query:  MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHP
        MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHP
Subjt:  MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHP

Query:  SGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP
        SGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP
Subjt:  SGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP

XP_038881626.1 VQ motif-containing protein 22-like [Benincasa hispida]7.3e-5569.27Show/hide
Query:  MSVTSDQW-PQFY---HGGA--DSTALPHGGSTNAN--SKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDE
        MS+TSDQW  QFY   HGGA   S    HG +TN N  SKP RRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA +PLG+HKGPVNLSFG  GD+
Subjt:  MSVTSDQW-PQFY---HGGA--DSTALPHGGSTNAN--SKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDE

Query:  PLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
         LH  NH   SVMLPFSD + F  RQ   EH+F  P +N     +G SRPA+EL+EIQNL+DE  D NYDLQEL MEFSSS+GNGNYGGGYF
Subjt:  PLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

TrEMBL top hitse value%identityAlignment
A0A0A0KII5 VQ domain-containing protein5.4e-4863.59Show/hide
Query:  MSVTSDQW-PQFY----HGG-ADSTALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG
        MS+TSDQW  QFY    HGG + S+A+ H G    ++N+ SKP RRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLG+HKGPVNLSFG  G
Subjt:  MSVTSDQW-PQFY----HGG-ADSTALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG

Query:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPV-EHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
        D+ LH  NHP  SVMLPFSD      RQ    EH+F  P E+   +G  ++  A +L+EIQNL+DE  DL+YDLQEL MEF SS+GNGNYGGGYF
Subjt:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPV-EHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

A0A1S3B3C3 uncharacterized protein LOC1034852954.0e-5165.46Show/hide
Query:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG
        MS+TSDQW  QFY    HGGA  S+A+ H G    ++N+ SKP RRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLG+HKGPVNLSFG  G
Subjt:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG

Query:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
        D+ LH  NHP  SVMLPFSD R    RQ P E +F    E+     +G S P +EL+EI+NL+DE  DL+YDLQEL MEFSSS+GNGNYGGGYF
Subjt:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

A0A5D3CPL3 VQ domain-containing protein2.6e-5064.95Show/hide
Query:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG
        MS+TSDQW  QFY    HG A  S+A+ H G    ++N+ SKP RRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLG+HKGPVNLSFG  G
Subjt:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG

Query:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
        D+ LH  NHP  SVMLPFSD R    RQ P E +F    E+     +G S P +EL+EI+NL+DE  DL+YDLQEL MEFSSS+GNGNYGGGYF
Subjt:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

A0A6J1CXT5 uncharacterized protein LOC1110157941.1e-101100Show/hide
Query:  MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHP
        MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHP
Subjt:  MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHP

Query:  SGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP
        SGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP
Subjt:  SGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP

E5GCL8 VQ domain-containing protein4.0e-5165.46Show/hide
Query:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG
        MS+TSDQW  QFY    HGGA  S+A+ H G    ++N+ SKP RRRSRASRKAPTTLLNAST+NFRDLVQQFTGF AAGA++PLG+HKGPVNLSFG  G
Subjt:  MSVTSDQW-PQFY----HGGAD-STALPHGG----STNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPG

Query:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF
        D+ LH  NHP  SVMLPFSD R    RQ P E +F    E+     +G S P +EL+EI+NL+DE  DL+YDLQEL MEFSSS+GNGNYGGGYF
Subjt:  DEPLHTLNHPSGSVMLPFSDARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYF

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 221.0e-0658.18Show/hide
Query:  DSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        DS   P  G     +KPTRRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A
Subjt:  DSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein1.5e-0546.94Show/hide
Query:  ANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGA
        ++S+  R+R+RASR+APTT+L   T+NFR +VQ+FTG  A+  + P  +
Subjt:  ANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGA

AT3G22160.1 VQ motif-containing protein7.1e-0858.18Show/hide
Query:  DSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        DS   P  G     +KPTRRRSRASR+ PTTLLN  T+NFR +VQQ+TG  +A A
Subjt:  DSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

AT4G15120.1 VQ motif-containing protein1.1e-0842.53Show/hide
Query:  MSVTSDQWPQFYHG----------------GADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA
        M+ +++ W QFY+                  A S   P        +KPTRRRSRASR+ PTTL N  TANFR +VQQFTG  +A A
Subjt:  MSVTSDQWPQFYHG----------------GADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGA

AT4G20000.1 VQ motif-containing protein1.4e-0842.57Show/hide
Query:  DQWPQFYH----------------GGADSTALPHGGSTNANSKPTRRRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGH
        DQW Q Y                   +  ++L  GG+  A  +   RRSRASR+A PTTLLNA+ +NFR LVQ+FTG  A G +      KGPV L FG 
Subjt:  DQWPQFYH----------------GGADSTALPHGGSTNANSKPTRRRSRASRKA-PTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGH

Query:  P
        P
Subjt:  P

AT4G39720.1 VQ motif-containing protein6.6e-0662.16Show/hide
Query:  KPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQA
        K T++RSRASR+APTT+L   T+NFR +VQ+FTG  A
Subjt:  KPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTCACCAGCGATCAGTGGCCCCAATTCTACCACGGCGGCGCCGATTCCACGGCCCTCCCACACGGCGGTTCCACCAATGCTAATTCCAAGCCCACCAGACGGCG
CTCCCGAGCTTCTCGGAAGGCGCCCACCACGCTCCTGAACGCCAGCACCGCCAATTTCCGGGACTTGGTGCAGCAGTTCACCGGCTTCCAGGCCGCCGGCGCCACCGTGC
CCTTGGGCGCCCACAAGGGCCCCGTCAACCTCAGCTTCGGCCACCCCGGAGATGAGCCGCTGCACACCCTCAACCACCCCTCTGGCTCTGTTATGCTCCCTTTCTCCGAC
GCCCGCCACTTTCACTACCGCCAGCCGCCGGTGGAGCACCAATTCGCCTACCCGCCGGAAAACAGGAGCGGCAGCGGCGATGGGCTTTCTCGGCCGGCGTCGGAACTCGT
CGAAATTCAGAATCTGATGGACGAGGACGATGATTTGAATTACGATCTGCAGGAATTGGCCATGGAATTTTCCTCTTCCAATGGGAATGGGAATTACGGCGGTGGCTACT
TCCCC
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTCACCAGCGATCAGTGGCCCCAATTCTACCACGGCGGCGCCGATTCCACGGCCCTCCCACACGGCGGTTCCACCAATGCTAATTCCAAGCCCACCAGACGGCG
CTCCCGAGCTTCTCGGAAGGCGCCCACCACGCTCCTGAACGCCAGCACCGCCAATTTCCGGGACTTGGTGCAGCAGTTCACCGGCTTCCAGGCCGCCGGCGCCACCGTGC
CCTTGGGCGCCCACAAGGGCCCCGTCAACCTCAGCTTCGGCCACCCCGGAGATGAGCCGCTGCACACCCTCAACCACCCCTCTGGCTCTGTTATGCTCCCTTTCTCCGAC
GCCCGCCACTTTCACTACCGCCAGCCGCCGGTGGAGCACCAATTCGCCTACCCGCCGGAAAACAGGAGCGGCAGCGGCGATGGGCTTTCTCGGCCGGCGTCGGAACTCGT
CGAAATTCAGAATCTGATGGACGAGGACGATGATTTGAATTACGATCTGCAGGAATTGGCCATGGAATTTTCCTCTTCCAATGGGAATGGGAATTACGGCGGTGGCTACT
TCCCC
Protein sequenceShow/hide protein sequence
MSVTSDQWPQFYHGGADSTALPHGGSTNANSKPTRRRSRASRKAPTTLLNASTANFRDLVQQFTGFQAAGATVPLGAHKGPVNLSFGHPGDEPLHTLNHPSGSVMLPFSD
ARHFHYRQPPVEHQFAYPPENRSGSGDGLSRPASELVEIQNLMDEDDDLNYDLQELAMEFSSSNGNGNYGGGYFP