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MS011138 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011138
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold325:203137..203268
RNA-Seq ExpressionMS011138
SyntenyMS011138
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-0553.85Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
        ++CKR+W+ +GDE+S+FFHK+CTAR++K  I +II++ G
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.6e-0655Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGI
        +R K+LWL +GDE+S+FFH++CTAR+++ FI EI  +EG+
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGI
KAA0050053.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.6e-0652.27Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
        ++ KRLW T+GDE+++FFHK+C+AR+R+  I  I SD+G+  TT
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
TYK10356.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.6e-0652.27Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
        ++ KRLW T+GDE+++FFHK+C+AR+R+  I  I SD+G+  TT
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
TYK29577.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-0553.85Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
        ++CKR+W+ +GDE+S+FFHK+CTAR++K  I +II++ G
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein7.9e-0653.85Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
        ++CKR+W+ +GDE+S+FFHK+CTAR++K  I +II++ G
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein2.7e-0655Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGI
        +R K+LWL +GDE+S+FFH++CTAR+++ FI EI  +EG+
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGI
A0A5A7U2D0 LINE-1 retrotransposable element ORF2 protein2.7e-0652.27Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
        ++ KRLW T+GDE+++FFHK+C+AR+R+  I  I SD+G+  TT
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
A0A5D3CJ08 LINE-1 retrotransposable element ORF2 protein2.7e-0652.27Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
        ++ KRLW T+GDE+++FFHK+C+AR+R+  I  I SD+G+  TT
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT
A0A5D3E0F6 LINE-1 retrotransposable element ORF2 protein7.9e-0653.85Show/hide
Query:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
        ++CKR+W+ +GDE+S+FFHK+CTAR++K  I +II++ G
Subjt:  KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAGGTGCAAGCGGTTGTGGTTAACTGATGGGGATGAGAGCTCGACTTTCTTCCATAAAGTTTGTACGGCTCGAAAAAGAAAAGGTTTTATATTAGAAATCATAAGCGA
TGAAGGAATTAGCCTTACCACG
mRNA sequenceShow/hide mRNA sequence
AAAAGGTGCAAGCGGTTGTGGTTAACTGATGGGGATGAGAGCTCGACTTTCTTCCATAAAGTTTGTACGGCTCGAAAAAGAAAAGGTTTTATATTAGAAATCATAAGCGA
TGAAGGAATTAGCCTTACCACG
Protein sequenceShow/hide protein sequence
KRCKRLWLTDGDESSTFFHKVCTARKRKGFILEIISDEGISLTT