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MS011140 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011140
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncationic amino acid transporter 6, chloroplastic
Genome locationscaffold325:350440..350614
RNA-Seq ExpressionMS011140
SyntenyMS011140
Gene Ontology termsGO:0003333 - amino acid transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015171 - amino acid transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578824.1 Cationic amino acid transporter 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.7e-1472.88Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT + HFVTPGK KTALL+I
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
TYK11776.1 cationic amino acid transporter 6 [Cucumis melo var. makuwa]1.6e-1371.19Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT M HFVTPGK KT LL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
XP_008456609.1 PREDICTED: cationic amino acid transporter 6, chloroplastic [Cucumis melo]1.6e-1371.19Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT M HFVTPGK KT LL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
XP_022133543.1 cationic amino acid transporter 7, chloroplastic-like, partial [Momordica charantia]1.5e-1474.58Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ VGR+DPRPTLSF CSFSLTAI FT + HFV+PGK KTALL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
XP_023550937.1 cationic amino acid transporter 6, chloroplastic-like [Cucurbita pepo subsp. pepo]1.6e-1371.19Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT + HFVTPGK KTALL +
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
TrEMBL top hitse value%identityAlignment
A0A1S3C3M2 cationic amino acid transporter 6, chloroplastic8.0e-1471.19Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT M HFVTPGK KT LL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
A0A5D3CMX6 Cationic amino acid transporter 68.0e-1471.19Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT M HFVTPGK KT LL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
A0A6J1BZE8 cationic amino acid transporter 7, chloroplastic-like7.2e-1574.58Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ VGR+DPRPTLSF CSFSLTAI FT + HFV+PGK KTALL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
A0A6J1FGS4 cationic amino acid transporter 6, chloroplastic-like1.4e-1371.19Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT + HF TPGK KTALL+I
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
A0A6J1K008 cationic amino acid transporter 6, chloroplastic-like1.8e-1369.49Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
        FVFYMVANA+IY  Y+ +G ++PRPTLSF CSFSLTAI FT + HFVTPGK KT LL++
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALLNI
SwissProt top hitse value%identityAlignment
Q9LZ20 Cationic amino acid transporter 6, chloroplastic2.6e-0649.12Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSFCS-FSLTAIGFTFMCHFVTPGKFKTALL
        FVFYMVANA+I+  Y+ VG + P PTL F + FS+T++ FT +   V  GK K  +L
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSFCS-FSLTAIGFTFMCHFVTPGKFKTALL
Q9SQZ0 Cationic amino acid transporter 7, chloroplastic4.1e-0750.88Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALL
        FVFYMVANA+I+  Y+ VG ++P PTLSF C FS+T+I FT +      G  K  +L
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALL
Arabidopsis top hitse value%identityAlignment
AT3G10600.1 cationic amino acid transporter 72.9e-0850.88Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALL
        FVFYMVANA+I+  Y+ VG ++P PTLSF C FS+T+I FT +      G  K  +L
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSF-CSFSLTAIGFTFMCHFVTPGKFKTALL
AT5G04770.1 cationic amino acid transporter 61.9e-0749.12Show/hide
Query:  FVFYMVANAIIYLHYIAVGRSDPRPTLSFCS-FSLTAIGFTFMCHFVTPGKFKTALL
        FVFYMVANA+I+  Y+ VG + P PTL F + FS+T++ FT +   V  GK K  +L
Subjt:  FVFYMVANAIIYLHYIAVGRSDPRPTLSFCS-FSLTAIGFTFMCHFVTPGKFKTALL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGTCTTTTACATGGTGGCCAACGCTATTATTTATCTGCACTACATCGCGGTTGGAAGGTCTGATCCACGCCCAACGTTATCCTTCTGCTCATTCTCACTGACCGCCAT
CGGATTCACTTTCATGTGCCACTTTGTAACTCCAGGTAAGTTTAAAACTGCCTTACTGAACATC
mRNA sequenceShow/hide mRNA sequence
TTTGTCTTTTACATGGTGGCCAACGCTATTATTTATCTGCACTACATCGCGGTTGGAAGGTCTGATCCACGCCCAACGTTATCCTTCTGCTCATTCTCACTGACCGCCAT
CGGATTCACTTTCATGTGCCACTTTGTAACTCCAGGTAAGTTTAAAACTGCCTTACTGAACATC
Protein sequenceShow/hide protein sequence
FVFYMVANAIIYLHYIAVGRSDPRPTLSFCSFSLTAIGFTFMCHFVTPGKFKTALLNI