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MS011198 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011198
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein BIC1-like
Genome locationscaffold239:91034..91276
RNA-Seq ExpressionMS011198
SyntenyMS011198
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027199.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2576.19Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
        E G ERL RHR+AVAGQVWIPEKWGKEE LKDWIDGSAFEASL PSG+VSAR AL  + KRSS   +S  A+AAAGA+RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
XP_022962648.1 protein BIC1-like [Cucurbita moschata]2.2e-2473.81Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
        E G ERL RHR+AVAGQVWIPEKWGKEE LKDWIDGSAFEASL PSG+VSAR AL  + KRSS   +S  A+A AG++RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
XP_022972606.1 protein BIC1-like [Cucurbita maxima]1.3e-2475Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
        E G ERL RHR+AVAGQVWIPEKWGKEE LKDWIDGSAFEASL PSG+V AR AL  + KRSS   +S  A+AAAGA+RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
XP_023518112.1 protein BIC1-like [Cucurbita pepo subsp. pepo]3.4e-2576.19Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
        E G ERL RHR+AVAGQVWIPEKWGKEE LKDWIDGSAFEASL PSG+VSAR AL  + KRSS   +S  A+AAAGA+RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
XP_038882952.1 protein BIC2-like [Benincasa hispida]7.6e-2572.09Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKR-----SSSSPPAAAAAGAMRILNSC
        E+GRERL RHR+AVAGQVWIP+KWGKEEFLKDWIDGSAFEASL PSG+VSAR AL    KR     ++++  AAA AGA+RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKR-----SSSSPPAAAAAGAMRILNSC
TrEMBL top hitse value%identityAlignment
A0A061ETV0 Uncharacterized protein2.6e-1860.49Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGAMRILNSC
        E GRERL RHR+ VAG+VWIPE WG+E+ LKDWID SAFEASL+PSG++SAR AL+ +G+ ++S        G  RI NSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGAMRILNSC
A0A0A0KFC4 Uncharacterized protein6.5e-2266.67Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKR-------SSSSPPAAAAAGAMRILNS
        E+ RERL RHR+AVAG VWIP+KWGKEEFLKDWIDGSAFEASL  SG+VSAR AL    KR       ++++  A AAAGA+RILNS
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKR-------SSSSPPAAAAAGAMRILNS
A0A5D3C697 Protein BIC1 isoform X13.5e-2369.41Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKR-----SSSSPPAAAAAGAMRILNS
        E+ RERL RHR+AVAG VWIP+KWGKEEFLKDWIDGSAFEASL PSG+VSAR AL    KR     ++++  A AAAGA+RILNS
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKR-----SSSSPPAAAAAGAMRILNS
A0A6J1HFE1 protein BIC1-like1.1e-2473.81Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
        E G ERL RHR+AVAGQVWIPEKWGKEE LKDWIDGSAFEASL PSG+VSAR AL  + KRSS   +S  A+A AG++RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
A0A6J1I6F1 protein BIC1-like6.3e-2575Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
        E G ERL RHR+AVAGQVWIPEKWGKEE LKDWIDGSAFEASL PSG+V AR AL  + KRSS   +S  A+AAAGA+RILNSC
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSS---SSPPAAAAAGAMRILNSC
SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC14.7e-1758.46Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSS
        +TGRERL +HR  +AG+VWIPE WG+EE LKDWID S F+  L+P+G+ SAR ALV + +R++S+
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSS
Q9M280 Protein BIC23.6e-0944.05Show/hide
Query:  TGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGA----MRILNSC
        +GR+RL RHR  VAG+V IP+ WGKE  L  W+D S F+A+   S +VSAR AL+      + S   A A G+    +R+ +SC
Subjt:  TGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGA----MRILNSC
Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein2.5e-1044.05Show/hide
Query:  TGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGA----MRILNSC
        +GR+RL RHR  VAG+V IP+ WGKE  L  W+D S F+A+   S +VSAR AL+      + S   A A G+    +R+ +SC
Subjt:  TGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGA----MRILNSC
AT3G52740.1 unknown protein3.3e-1858.46Show/hide
Query:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSS
        +TGRERL +HR  +AG+VWIPE WG+EE LKDWID S F+  L+P+G+ SAR ALV + +R++S+
Subjt:  ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGACCGGCCGGGAGCGGCTCACGCGCCACCGGCTGGCGGTGGCGGGGCAGGTTTGGATCCCGGAAAAATGGGGCAAGGAGGAGTTCTTGAAGGATTGGATCGACGGCTC
TGCCTTTGAAGCCTCTTTGCTCCCCTCCGGTGTCGTGTCGGCTCGCCTGGCTTTGGTCACACAAGGCAAGAGATCGTCGTCGTCGCCGCCCGCCGCCGCCGCCGCCGGAG
CTATGAGAATATTAAACAGCTGT
mRNA sequenceShow/hide mRNA sequence
GAGACCGGCCGGGAGCGGCTCACGCGCCACCGGCTGGCGGTGGCGGGGCAGGTTTGGATCCCGGAAAAATGGGGCAAGGAGGAGTTCTTGAAGGATTGGATCGACGGCTC
TGCCTTTGAAGCCTCTTTGCTCCCCTCCGGTGTCGTGTCGGCTCGCCTGGCTTTGGTCACACAAGGCAAGAGATCGTCGTCGTCGCCGCCCGCCGCCGCCGCCGCCGGAG
CTATGAGAATATTAAACAGCTGT
Protein sequenceShow/hide protein sequence
ETGRERLTRHRLAVAGQVWIPEKWGKEEFLKDWIDGSAFEASLLPSGVVSARLALVTQGKRSSSSPPAAAAAGAMRILNSC