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MS011212 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011212
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR15
Genome locationscaffold239:148598..149002
RNA-Seq ExpressionMS011212
SyntenyMS011212
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595178.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5584.29Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-----SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFG
        MLGKKMVSFKKLAKKVKVR GT+G    +SH+E LLRDRLESS+D +S SPS     +STPTGSFA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFG
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-----SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFG

Query:  FKQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        F+QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  FKQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

KAG7027194.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-5686.76Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQR
        MLGKKMVSFKKLAKKVKVR GT+G    +SH+E LLRDRLESS+D +S SPS +STPTGSFA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+QR
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022133168.1 auxin-responsive protein SAUR15 [Momordica charantia]5.1e-6698.52Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN
        MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLE SEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGF+QRN
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022962864.1 auxin-induced protein 6B-like [Cucurbita moschata]8.2e-5685.51Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS---SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFK
        MLGKKMVSFKKLAKKVKVR GT+G    +SH+E LLRDRLESS+D +S SPS   +STPTGSFA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS---SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFK

Query:  QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022972619.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.6e-5687.5Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQR
        MLGKKMVSFKKLAKKVKVR GT+G   E+SH+E LLRDRLESS+D +S SPS +STPTGSFA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+QR
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

TrEMBL top hitse value%identityAlignment
A0A6J1BYB1 auxin-responsive protein SAUR152.5e-6698.52Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN
        MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLE SEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGF+QRN
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1EDQ2 auxin-induced protein 15A2.0e-5586.67Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN
        MLGKKMVSFKKLAKKVKVR GT+G   EAS++E LLRD+LE  ED +SQSP SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+QRN
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        AL+VPCSVSAFQEIVSAVECCNGRFDFGE+VEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1HIA1 auxin-induced protein 6B-like4.0e-5685.51Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS---SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFK
        MLGKKMVSFKKLAKKVKVR GT+G    +SH+E LLRDRLESS+D +S SPS   +STPTGSFA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS---SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFK

Query:  QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  QRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1IC38 auxin-responsive protein SAUR50-like8.0e-5787.5Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQR
        MLGKKMVSFKKLAKKVKVR GT+G   E+SH+E LLRDRLESS+D +S SPS +STPTGSFA+YVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+QR
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPS-SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1ILC7 auxin-induced protein 15A-like6.3e-5485.19Show/hide
Query:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN
        MLGKKMVSFKKLAKKVKVR GT+G   EAS++E LLRD+LE  ED +SQSP S+TPTGSFAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGF+QRN
Subjt:  MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        AL+VPCSVSAFQEIVSAVEC NGRFDFGE+VEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR402.0e-0935.82Show/hide
Query:  SSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAV
        +SS P+G   + VG++++RFVV    L+HP+F  +L+++ +E+G+ Q+  L +PC+V  F+++V ++
Subjt:  SSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAV

O65695 Auxin-responsive protein SAUR508.3e-1144.44Show/hide
Query:  PTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAV
        P G F +YVG+ R R++VP SFL+HP F+ +L +A  EFGF     L +PC    FQ + S +
Subjt:  PTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAV

P32295 Indole-3-acetic acid-induced protein ARG71.3e-0840.26Show/hide
Query:  SEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQ-RNALVVPCSVSAFQEIVSAV
        S   E+ S     P G  A+YVG+  +RFV+P S L+ PLF+ +L +A  EFG+      L +PCS   FQ I S +
Subjt:  SEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQ-RNALVVPCSVSAFQEIVSAV

Q41220 Auxin-responsive protein SAUR156.0e-0941.67Show/hide
Query:  SSSTPTGSFAIYVGD---ERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQ-RNALVVPCSVSAFQEIVSAVE
        SSSTP G  A+YVG+   +++R+VVP S+L+ PLF+ +L K+  EFG+      L +PC  S F  + S ++
Subjt:  SSSTPTGSFAIYVGD---ERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQ-RNALVVPCSVSAFQEIVSAVE

Q9LTV3 Auxin-responsive protein SAUR722.2e-1139.24Show/hide
Query:  LESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAV
        L SS  + S+  +SS P G   +YVGDE +RFVV    L+HP+F  +L+++ +E+G++Q+  L +PC V  F+ I+ ++
Subjt:  LESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAV

Arabidopsis top hitse value%identityAlignment
AT2G36210.1 SAUR-like auxin-responsive protein family1.7e-3556.74Show/hide
Query:  MLGKKMVSFKKLAKKVK-----VRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREF-
        MLGK++ SFK LAKK+K      R+G +GG +E++++ESLL      +E  E+   +S TPTG+FA+YVG+ER + VVPTS+L+HPLFRM+LDK++ EF 
Subjt:  MLGKKMVSFKKLAKKVK-----VRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREF-

Query:  GFKQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
         F+Q+  LVVPCS+S FQ++V+AVE CNG FDFGE VEEFL
Subjt:  GFKQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

AT3G20220.1 SAUR-like auxin-responsive protein family2.4e-1337.89Show/hide
Query:  HESLLRDRLESSEDQESQSPS---SSTPTGSFAIYVG-DERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVECCN
        +E+ ++DRL S E  +   P+   +  P G  A+YVG +ERQRFV+PT +L +P FR ++D+   EFG+     + +PC  S F+EI+     C+
Subjt:  HESLLRDRLESSEDQESQSPS---SSTPTGSFAIYVG-DERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVECCN

AT3G43120.1 SAUR-like auxin-responsive protein family1.5e-1535.88Show/hide
Query:  KKMVSFKKLAKK---VKVRAGTDGGEAEASHHESL----LRDRL------ESSEDQESQSPS--SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLD
        K++V  K++ +K   V + + +D GE  A  H ++    +  RL      +S E+   QSP      P G  A+YVG E +RF++PT+FLSH LF+++L+
Subjt:  KKMVSFKKLAKK---VKVRAGTDGGEAEASHHESL----LRDRL------ESSEDQESQSPS--SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLD

Query:  KAYREFGFKQRNALVVPCSVSAFQEIVSAVE
        KA  E+GF    AL +PC V  F+ ++  +E
Subjt:  KAYREFGFKQRNALVVPCSVSAFQEIVSAVE

AT5G20810.1 SAUR-like auxin-responsive protein family6.7e-1646.05Show/hide
Query:  EDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVE
        E  +S  P    P G+ A+YVG E +RF++PTS+LSH LF+++L+KA  EFGF Q  AL +PC V  F+ ++  +E
Subjt:  EDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVE

AT5G20810.2 SAUR-like auxin-responsive protein family6.7e-1646.05Show/hide
Query:  EDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVE
        E  +S  P    P G+ A+YVG E +RF++PTS+LSH LF+++L+KA  EFGF Q  AL +PC V  F+ ++  +E
Subjt:  EDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSAFQEIVSAVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGCCGGAACCGATGGCGGCGAAGCAGAAGCATCGCACCACGAGTCTTTGCTCAG
AGATCGACTGGAATCGTCGGAGGATCAGGAATCTCAGTCTCCGTCTTCTTCGACGCCGACTGGTTCGTTCGCTATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTTC
CGACGAGCTTCTTGTCGCACCCGCTCTTCCGGATGGTGCTCGACAAGGCGTACAGAGAGTTCGGATTCAAGCAGAGGAACGCGCTCGTGGTTCCTTGCAGCGTCTCCGCC
TTCCAAGAAATCGTGAGCGCAGTAGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTT
mRNA sequenceShow/hide mRNA sequence
ATGCTGGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGCCGGAACCGATGGCGGCGAAGCAGAAGCATCGCACCACGAGTCTTTGCTCAG
AGATCGACTGGAATCGTCGGAGGATCAGGAATCTCAGTCTCCGTCTTCTTCGACGCCGACTGGTTCGTTCGCTATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTTC
CGACGAGCTTCTTGTCGCACCCGCTCTTCCGGATGGTGCTCGACAAGGCGTACAGAGAGTTCGGATTCAAGCAGAGGAACGCGCTCGTGGTTCCTTGCAGCGTCTCCGCC
TTCCAAGAAATCGTGAGCGCAGTAGAATGCTGCAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTT
Protein sequenceShow/hide protein sequence
MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLESSEDQESQSPSSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFKQRNALVVPCSVSA
FQEIVSAVECCNGRFDFGEIVEEFL