; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011215 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011215
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAlpha-amylase
Genome locationscaffold239:166085..167623
RNA-Seq ExpressionMS011215
SyntenyMS011215
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595177.1 hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]7.8e-8783.92Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M AIT +TK LI HTTVN RP +LS+M SH  LVFVGWN RRR+ SKLS VS P  RN  LAPKSS+EN DILPSED+PEDGVSLGTMKLPSDIDIA+FE
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI
        VLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLLSALKKS+EI++
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI

XP_022962862.1 uncharacterized protein LOC111463229 [Cucurbita moschata]1.0e-8683Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M  IT +TK LI HTTVN RP +LS+M SH  LVFVGWN RRR+ SKLS +S P  RN  LAPKSS+EN DILPSED+PEDGVSLGTMKLPSDIDIA+FE
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV
        VLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLLSALKKS+EI++V
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV

XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]7.8e-8783.5Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M AIT +TK LI HTTVN RP +LS+M SH  LVFVGWN RRR+ SKLS VS P  RN  LAPKSS+EN DI PSED+PEDGVSLGTMKLPSDIDIA+FE
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV
        VLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLLSALKKS+EI++V
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV

XP_023517184.1 uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo]5.0e-8682.5Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M +IT +TK LI HTTV+ RP +LS+M SH  LV+VGWN RRR+ SKLS VS P  RN  LAPKSS+EN DILPSED+PEDGVSLGTMKLPSDIDIA+FE
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV
        VLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLLSALKKS+EI++V
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV

XP_038881940.1 uncharacterized protein LOC120073272 [Benincasa hispida]4.6e-8782Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M+AI+ +TKQ I +TTVN RPC+LS M SH  LVFV WN R R+IS+ S++S P LRN KL PKSSDEN DI+PSEDDPEDGVSLGTMKLPSDIDIARF+
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV
        VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATA+T+PIFRAIRNGRL+DQ PPGEPRIMRSLL ALKKS+EIS V
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV

TrEMBL top hitse value%identityAlignment
A0A0A0KFD4 Uncharacterized protein3.6e-8280.1Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSP-LVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARF
        MDAI+ +T Q I +  VN RPC+ SSM SH+P LVF   N R R+IS  S+VS P  R PKL PKSSDEN DI+PSEDDPEDGVSLGTMKLP D DIARF
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSP-LVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARF

Query:  EVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI
        +VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLL ALKKS+EIS 
Subjt:  EVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI

Query:  V
        V
Subjt:  V

A0A1S3CH91 uncharacterized protein LOC1035009099.0e-8179.1Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSP-LVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARF
        MDAI+ +T Q   H  VN RPC+LS M SH+P LVF   N R R+IS  S+ S P  R   L PKSSDEN DI+PSEDDPEDGVSLGTMKLP D DIARF
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSP-LVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARF

Query:  EVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI
        +VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQ PPGEPRIMRSLL ALKKS+EIS 
Subjt:  EVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI

Query:  V
        V
Subjt:  V

A0A5A7SHD0 Uncharacterized protein9.0e-8179.1Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSP-LVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARF
        MDAI+ +T Q   H  VN RPC+LS M SH+P LVF   N R R+IS  S+ S P  R   L PKSSDEN DI+PSEDDPEDGVSLGTMKLP D DIARF
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSP-LVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARF

Query:  EVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI
        +VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQ PPGEPRIMRSLL ALKKS+EIS 
Subjt:  EVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISI

Query:  V
        V
Subjt:  V

A0A6J1HDQ9 uncharacterized protein LOC1114632294.9e-8783Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M  IT +TK LI HTTVN RP +LS+M SH  LVFVGWN RRR+ SKLS +S P  RN  LAPKSS+EN DILPSED+PEDGVSLGTMKLPSDIDIA+FE
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV
        VLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLLSALKKS+EI++V
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV

A0A6J1I6G0 uncharacterized protein LOC1114711573.8e-8783.5Show/hide
Query:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE
        M AIT +TK LI HTTVN RP +LS+M SH  LVFVGWN RRR+ SKLS VS P  RN  LAPKSS+EN DI PSED+PEDGVSLGTMKLPSDIDIA+FE
Subjt:  MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFE

Query:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV
        VLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDGKTEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQ PPGEPRIMRSLLSALKKS+EI++V
Subjt:  VLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36145.1 unknown protein3.3e-4370.97Show/hide
Query:  DPEDGVSLGTMKLPSDIDIARFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQP
        + EDGVSLGTMKLP D D+ARFE LLFQWANSLCQGANLPLPVPL+VD+I  G RLGFI + D GKT+V VYIDCLVF  T     +F+A RNGR KD+ 
Subjt:  DPEDGVSLGTMKLPSDIDIARFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGD-GKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQP

Query:  PPGEPRIMRSLLSALKKSIEISIV
        PPGE RIMRSLL ALKK++EI+ V
Subjt:  PPGEPRIMRSLLSALKKSIEISIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCATTACTTGTACAACAAAGCAACTAATTCATCACACAACTGTAAATTATCGGCCATGTCTTTTGTCTTCAATGGTGTCTCACTCGCCACTGGTTTTCGTCGG
TTGGAATGCTCGGCGTCGTGAAATCTCCAAGCTCTCTGAAGTCTCAGTTCCATGGCTCAGGAATCCGAAGCTGGCGCCCAAGTCTTCCGACGAGAACAAGGATATTTTGC
CCTCAGAAGATGACCCTGAAGACGGAGTCTCGCTTGGGACCATGAAATTGCCATCGGACATTGACATTGCGCGATTCGAGGTCTTACTCTTCCAGTGGGCCAATAGTCTT
TGCCAGGGAGCTAACCTGCCGCTTCCAGTGCCTTTGAGGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTCCTCGT
GTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCACCAGTCCAATTTTTCGTGCCATAAGAAATGGACGATTAAAGGACCAGCCACCTCCTGGTGAACCGAGAATTA
TGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAATTGAAATTTCTATAGTA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCATTACTTGTACAACAAAGCAACTAATTCATCACACAACTGTAAATTATCGGCCATGTCTTTTGTCTTCAATGGTGTCTCACTCGCCACTGGTTTTCGTCGG
TTGGAATGCTCGGCGTCGTGAAATCTCCAAGCTCTCTGAAGTCTCAGTTCCATGGCTCAGGAATCCGAAGCTGGCGCCCAAGTCTTCCGACGAGAACAAGGATATTTTGC
CCTCAGAAGATGACCCTGAAGACGGAGTCTCGCTTGGGACCATGAAATTGCCATCGGACATTGACATTGCGCGATTCGAGGTCTTACTCTTCCAGTGGGCCAATAGTCTT
TGCCAGGGAGCTAACCTGCCGCTTCCAGTGCCTTTGAGGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGAAGTCCTCGT
GTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCACCAGTCCAATTTTTCGTGCCATAAGAAATGGACGATTAAAGGACCAGCCACCTCCTGGTGAACCGAGAATTA
TGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAATTGAAATTTCTATAGTA
Protein sequenceShow/hide protein sequence
MDAITCTTKQLIHHTTVNYRPCLLSSMVSHSPLVFVGWNARRREISKLSEVSVPWLRNPKLAPKSSDENKDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLFQWANSL
CQGANLPLPVPLRVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQPPPGEPRIMRSLLSALKKSIEISIV