; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011240 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011240
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription termination factor MTEF1
Genome locationscaffold239:339098..340093
RNA-Seq ExpressionMS011240
SyntenyMS011240
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025223.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]5.9e-15684.18Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        + D +L  LSNG F   HSSPSP FPS+ R  T    FP LSN+  SF+FPSKLPPR P +PPLS   PP  PH D  ++FQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPE+LTSRA+DL+P+FTFLLREARV GSDIKRV+NRRPRLLACSVKD+LRPTLYFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLEVCCDSSIPLRTSPLWCTKL
        P+LLK+SEMKFREKLEVCCDSSIP RTSPLWCTKL
Subjt:  PDLLKTSEMKFREKLEVCCDSSIPLRTSPLWCTKL

KAE8647430.1 hypothetical protein Csa_003511 [Cucumis sativus]1.1e-14383.86Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        + D +L  LSNG F   HSSPSP FPS+ RS T    FP LSN+  SF+FPSKLPPR+PA+PPLS   PP  PH D  ++FQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA+ASL DIRSAVDFMTSMNFT +E RRIVGMCPEILTSRA+ L+P+FTFLLREARV GSDIKRV+NRRPRLLACSVKD+LRPTLYFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLE
        P+LLK+SEMKFREKLE
Subjt:  PDLLKTSEMKFREKLE

XP_016902903.1 PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo]1.1e-14383.54Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        + D +L  LSNG F   HSSPSP FPS+ R  T    FP LSN+  SF+FPSKLPPR P +PPLS   PP  PH D  ++FQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPE+LTSRA+DL+P+FTFLLREARV GSDIKRV+NRRPRLLACSVKD+LRPTLYFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLE
        P+LLK+SEMKFREKLE
Subjt:  PDLLKTSEMKFREKLE

XP_038883666.1 transcription termination factor MTEF1, chloroplastic isoform X1 [Benincasa hispida]6.1e-14584.42Show/hide
Query:  ALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIKDHPP
        +L  LSNG F   HSSPSP FPS+ RS T    FP LSN+ I+FVFPSKLPPR+P + PLS   PPP PH D  ++FQEKMLFLDSIGIDF SVIKDHPP
Subjt:  ALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIKDHPP

Query:  VAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHT
        VA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPEILTS A+DLVP+FTFLLREARV GSDIKRV+NRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHT
Subjt:  VAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHT

Query:  SLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLL
        SLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLP+LL
Subjt:  SLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLL

Query:  KTSEMKFREKLEV------CC
        KTSEMKFR+KLEV      CC
Subjt:  KTSEMKFREKLEV------CC

XP_038883667.1 transcription termination factor MTEF1, chloroplastic isoform X2 [Benincasa hispida]2.3e-14485.9Show/hide
Query:  ALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIKDHPP
        +L  LSNG F   HSSPSP FPS+ RS T    FP LSN+ I+FVFPSKLPPR+P + PLS   PPP PH D  ++FQEKMLFLDSIGIDF SVIKDHPP
Subjt:  ALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIKDHPP

Query:  VAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHT
        VA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPEILTS A+DLVP+FTFLLREARV GSDIKRV+NRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHT
Subjt:  VAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHT

Query:  SLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLL
        SLLSCSVEEKLIPRIEFFENLGFSRRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLP+LL
Subjt:  SLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLL

Query:  KTSEMKFREKLE
        KTSEMKFR+KLE
Subjt:  KTSEMKFREKLE

TrEMBL top hitse value%identityAlignment
A0A1S4E3U8 transcription termination factor MTEF1, chloroplastic5.6e-14483.54Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        + D +L  LSNG F   HSSPSP FPS+ R  T    FP LSN+  SF+FPSKLPPR P +PPLS   PP  PH D  ++FQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPE+LTSRA+DL+P+FTFLLREARV GSDIKRV+NRRPRLLACSVKD+LRPTLYFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLE
        P+LLK+SEMKFREKLE
Subjt:  PDLLKTSEMKFREKLE

A0A5A7SKM3 Transcription termination factor MTEF12.8e-15684.18Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        + D +L  LSNG F   HSSPSP FPS+ R  T    FP LSN+  SF+FPSKLPPR P +PPLS   PP  PH D  ++FQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA+ASL DIRSAVDFMTSMNFTA+EFRRIVGMCPE+LTSRA+DL+P+FTFLLREARV GSDIKRV+NRRPRLLACSVKD+LRPTLYFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGF RRDA+IMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLEVCCDSSIPLRTSPLWCTKL
        P+LLK+SEMKFREKLEVCCDSSIP RTSPLWCTKL
Subjt:  PDLLKTSEMKFREKLEVCCDSSIPLRTSPLWCTKL

A0A6J1HHJ6 transcription termination factor MTEF1, chloroplastic5.2e-14285.13Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        +QD AL  LSNG F   HSSPS  FPS+SRS T   QFP + NA I+F+ PSKLP R+P +PPLS   PPP  H   R+EFQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA ASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSR +D+VPVFTFLLREARV GSDIKRV+NRRPRLLACSVK+RLRPT+YFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLE
        P LLKTSEMKFREKLE
Subjt:  PDLLKTSEMKFREKLE

A0A6J1IAF5 transcription termination factor MTEF1, chloroplastic1.6e-14385.13Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK
        +QD AL  LSNG F   HSSPS  FPS+SRS T   QFP +SNA  +F+ PSKLP R+P +PPLS   PPP  H   R+EFQEKMLFLDSIGIDF SVIK
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLS---PPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIK

Query:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV
        DHPPVA ASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSR +D+VPVFTFLLREARV GSDIKRV+NRRPRLLACSVK+RLRPT+YFLQSIGISEV
Subjt:  DHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEV

Query:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL
        HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFC SIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQ CVEKGVCFPL
Subjt:  HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPL

Query:  PDLLKTSEMKFREKLE
        P LLKTSEMKFREKLE
Subjt:  PDLLKTSEMKFREKLE

F6HKR0 Uncharacterized protein1.2e-11972.31Show/hide
Query:  FPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPH-PDPRTEFQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFT
        F ++SR    +  FP LS+ T S   P K P +SP +P +SPP  P  PDP ++F+EKML+LDSIG+D FS+I DHPP+  ASL DI+S VDF+ SM FT
Subjt:  FPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPH-PDPRTEFQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFT

Query:  AVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLG
        A+EF RI GMCPEIL SR +D+VPVFTFLLREARV GSD++RVVNRRPRLLAC+VK+RLRPTLYFLQSIGISEV+KHT+LLSCSVEEKLIPRI++ E +G
Subjt:  AVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLG

Query:  FSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKLEVCCDSSIPLR
        FS+RDAV M RRFPQLF +SIK+NLEPK NYFVVEMGREL+ELKEFP YFSFSLENRIKPRHQ CVEKGVCFPLP +LKT+E KF  +LEVCC+SS PLR
Subjt:  FSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKLEVCCDSSIPLR

Query:  TSPLWCT
        TSPLWCT
Subjt:  TSPLWCT

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic1.9e-1624.38Show/hide
Query:  RTEFQEKMLFLDSIGI--DFFS-VIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRP
        R E  E + +L+S G+  D+   V+   P + + S+ +++S VDF   M     +F  +V   P+I+   +  ++      L+E  ++  ++ R++  +P
Subjt:  RTEFQEKMLFLDSIGI--DFFS-VIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRP

Query:  RLLACSVKDR-----------------------LRPTLY-------------FLQSIGISE---------------------------------------
         L+ CS+++R                       ++P LY             FLQ +GI                                         
Subjt:  RLLACSVKDR-----------------------LRPTLY-------------FLQSIGISE---------------------------------------

Query:  ----VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKG
            +    +LL CS+  KL P + ++ +LG        M   FP L  Y++ +NL PK  Y    M R L++L EFP +FS+SLE RI PRH   VE  
Subjt:  ----VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKG

Query:  VCFPLPDLLKTSEMKFREKL
        V F L  +L  ++ +F  ++
Subjt:  VCFPLPDLLKTSEMKFREKL

F4JVI3 Transcription termination factor MTERF5, chloroplastic3.2e-2430.34Show/hide
Query:  FLDSIGI---DFFSVIKDHPPVAAASLAD-IRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVK
        FL  +GI   D  +++   P +   SL D ++  + F+ ++     ++ +I+   P ILT     L     F L +  +    I R++ R P +++ SV+
Subjt:  FLDSIGI---DFFSVIKDHPPVAAASLAD-IRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVK

Query:  DRLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS
        D+LRPT+ + +S+ +     +H+       S+E  L P  EFF   GF   +  IM  R+  L+ +S+KEN+ PK +YF   M     EL +FP +F +S
Subjt:  DRLRPTLYFLQSIGISE---VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFS

Query:  LENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFRE
        L+ RIKPR++     GV   L  +L  S ++F +
Subjt:  LENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFRE

Q84X53 Transcription termination factor MTEF1, chloroplastic2.2e-4138.17Show/hide
Query:  FQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLAC
        F+EK+++L  + +D    ++ +P + +A ++ + S    ++S   +     RI+ M P++LTS   ++++PV  FL  E  ++  DI + ++R PRLL  
Subjt:  FQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLAC

Query:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  +LRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL ++LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKL

Q9FM80 Transcription termination factor MTERF9, chloroplastic5.4e-1927.05Show/hide
Query:  QEKMLFLDSIGI---DFFSVIKDHPPVAAASLA-DIRSAVDFMTSMNFTAVEFRRIVGMCPEILT-SRAADLVPVFTFLLREARVAGSDIKRVVNRRPRL
        QE++ +L S+G+   D   ++   P +   ++  ++++ + F+  +     +  +IV   P + + S    L P   +L+ E  +  +D+ +VV   P++
Subjt:  QEKMLFLDSIGI---DFFSVIKDHPPVAAASLA-DIRSAVDFMTSMNFTAVEFRRIVGMCPEILT-SRAADLVPVFTFLLREARVAGSDIKRVVNRRPRL

Query:  LACSVKDRLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL
        L   +         FL + +G      +  V KH  LL  S+++  +PRI F  ++G    D + +     Q+   S+++NL+PK  Y V E+  E+  L
Subjt:  LACSVKDRLRPTLYFL-QSIG------ISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKEL

Query:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPDLLKTSE
         ++P Y S SL+ RI+PRH+  VE     KG  FPL  L+   E
Subjt:  KEFPHYFSFSLENRIKPRHQSCVE-----KGVCFPLPDLLKTSE

Q9SZL6 Transcription termination factor MTERF6, chloroplastic/mitochondrial9.5e-1625.55Show/hide
Query:  SVIKDHPPVAAASLAD-IRSAVDFMTSMNFTAVEFRRIVGMCPEILT-SRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQ-
        S I   PP+ + S+ + +   + F  ++     +  +++   P +++ S    L  + +FL          I +V+ + P L+  SV  RLRPT  FL+ 
Subjt:  SVIKDHPPVAAASLAD-IRSAVDFMTSMNFTAVEFRRIVGMCPEILT-SRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQ-

Query:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR
        S+G+SE      V     LL   V + L P  ++ +  GF       M   +PQ+   S+K +L+P++ + V  MGR + E+  +P +F   L+ +++ R
Subjt:  SIGISE------VHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPR

Query:  HQSCVEKGVCFPLPDLLKTSEMKFREK
         +   +  +   L ++L  +  KF EK
Subjt:  HQSCVEKGVCFPLPDLLKTSEMKFREK

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein1.6e-4238.17Show/hide
Query:  FQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLAC
        F+EK+++L  + +D    ++ +P + +A ++ + S    ++S   +     RI+ M P++LTS   ++++PV  FL  E  ++  DI + ++R PRLL  
Subjt:  FQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLAC

Query:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
        SV  +LRP L FL+++G     +   ++T LL  +VE  LIP+IE+  E LGF+R +   M  R P L  YS+  NL PK+ +F+ EM  ++KELK FP 
Subjt:  SVKDRLRPTLYFLQSIGI----SEVHKHTSLLSCSVEEKLIPRIEFF-ENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKL
        YFSFSLE +IKPRH+   E G+  PL ++LK S+ +F   L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKL

AT2G34620.1 Mitochondrial transcription termination factor family protein5.1e-4941.91Show/hide
Query:  EFQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRA-ADLVPVFTFLLREARVAGSDIKRVVNRRPRLLA
        + +EK+L L+ +GID    +  +P + +A L  I+S + F+ S      +  RI+GMCP+ILTS    +L PVF FL  +  V  +  +RV+ + PRLL 
Subjt:  EFQEKMLFLDSIGIDFFSVIKDHPPVAAASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEILTSRA-ADLVPVFTFLLREARVAGSDIKRVVNRRPRLLA

Query:  CSVKDRLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH
         SV+D+L+P L++LQ +G+ ++    ++   LL  SVE  LIP++ F E++GFSR +A+ M  R P LF +SI+ N +PKL+YF+ E+  +L+ LKEFP 
Subjt:  CSVKDRLRPTLYFLQSIGISEV----HKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPH

Query:  YFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKL
        YF+FSLE RIKPRH   +E+G+  PL  +LK+++ +F + L
Subjt:  YFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKL

AT2G36000.1 Mitochondrial transcription termination factor family protein2.3e-8953.25Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISR----SSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPHPDPRT---EFQEKMLFLDSIGIDFF
        +Q  AL FLS+      H+     FPS+SR    +   L   P  S+++ SF        +SP +P LS          T      EK+++LDS+GIDF 
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISR----SSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPHPDPRT---EFQEKMLFLDSIGIDFF

Query:  SVIKDHPPVAAASLADIRSAVDFMTS--MNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAG-SDIKRVVNRRPRLLACSVKDRLRPTLYFL
        ++I  HPP+ + +L+ + S VD+MT+  +NFT  +FRR+V MCPE+LTS   +  +PV TFLLRE  V    D+++ + RRPRLLACSV  +LRPTLYFL
Subjt:  SVIKDHPPVAAASLADIRSAVDFMTS--MNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAG-SDIKRVVNRRPRLLACSVKDRLRPTLYFL

Query:  QSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCV
        Q IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C 
Subjt:  QSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCV

Query:  EKGVCFPLPDLLKTSEMKFREKLEVCCDSSIPLRTSPL
         KGV FPLP +LKT+E  FR+ LEVCCDSS PL+TS L
Subjt:  EKGVCFPLPDLLKTSEMKFREKLEVCCDSSIPLRTSPL

AT2G36000.2 Mitochondrial transcription termination factor family protein4.1e-8352.31Show/hide
Query:  LQDGALQFLSNGRFKFIHSSPSPFFPSISR----SSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPHPDPRT---EFQEKMLFLDSIGIDFF
        +Q  AL FLS+      H+     FPS+SR    +   L   P  S+++ SF        +SP +P LS          T      EK+++LDS+GIDF 
Subjt:  LQDGALQFLSNGRFKFIHSSPSPFFPSISR----SSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPHPDPRT---EFQEKMLFLDSIGIDFF

Query:  SVIKDHPPVAAASLADIRSAVDFMTS--MNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAG-SDIKRVVNRRPRLLACSVKDRLRPTLYFL
        ++I  HPP+ + +L+ + S VD+MT+  +NFT  +FRR+V MCPE+LTS   +  +PV TFLLRE  V    D+++ + RRPRLLACSV  +LRPTLYFL
Subjt:  SVIKDHPPVAAASLADIRSAVDFMTS--MNFTAVEFRRIVGMCPEILTS-RAADLVPVFTFLLREARVAG-SDIKRVVNRRPRLLACSVKDRLRPTLYFL

Query:  QSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCV
        Q IGI + HKHT LLSCSV+ KL+PRI++FE LGFSRR A  MF+RFPQLF YSI EN EPKL Y +VEMGR+++E+ EFP YFSFSLENRIKPRH++C 
Subjt:  QSIGISEVHKHTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCV

Query:  EKGVCFPLPDLLKTSEMKFREKLEV
         KGV FPLP +LKT+E  FR+ LEV
Subjt:  EKGVCFPLPDLLKTSEMKFREKLEV

AT3G18870.1 Mitochondrial transcription termination factor family protein1.6e-3133.33Show/hide
Query:  SPPPLPHPDP------RTEFQEKMLFLDSIGIDFFSVIKDHPPVA--AASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEIL--TSRAADLVPVFTFLLR
        S PP P          +T  +E +  L S+GI     +  +P +A  A  L+ I SAV+ + S   +  +F R+V +CP++   T   + L PVF FL  
Subjt:  SPPPLPHPDP------RTEFQEKMLFLDSIGIDFFSVIKDHPPVA--AASLADIRSAVDFMTSMNFTAVEFRRIVGMCPEIL--TSRAADLVPVFTFLLR

Query:  EARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEP
        E   +  + + ++   P +L   V+  LRPTL +L+ +G+  +++    +  +L+  V EKL  ++ F +++GF   +A  +  R P +F YS+++NL P
Subjt:  EARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHK----HTSLLSCSVEEKLIPRIEFFENLGFSRRDAVIMFRRFPQLFCYSIKENLEP

Query:  KLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREK
        K  + V +M REL+ELK+FP YF+FSL  RI+PRH    +K V   L  +L   + KF  K
Subjt:  KLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCAAGACGGAGCTCTCCAATTTCTCTCCAATGGCAGATTCAAATTCATCCACTCTTCTCCTTCCCCATTTTTCCCCTCAATTTCCCGCTCCTCCACAACCCTCCAACA
ATTCCCCTTCCTCTCCAATGCCACAATCTCTTTCGTTTTCCCCTCTAAACTGCCACCTCGGAGCCCCGCCGTTCCTCCCCTCTCGCCGCCGCCACTGCCCCACCCCGACC
CTCGCACCGAGTTCCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCTTCTCCGTCATCAAAGACCATCCTCCCGTCGCCGCCGCCTCCCTCGCTGACATC
AGATCCGCCGTCGATTTCATGACCTCCATGAACTTCACCGCCGTCGAGTTCCGGAGAATCGTCGGTATGTGCCCCGAGATCCTCACCTCTCGCGCCGCCGATCTCGTCCC
GGTCTTCACCTTCCTCCTCCGCGAGGCTCGAGTCGCCGGCTCCGACATCAAGCGCGTCGTAAATCGCCGCCCTAGGTTACTCGCCTGCAGCGTCAAGGATCGGCTCCGTC
CAACTCTCTACTTCCTACAAAGCATCGGCATATCGGAGGTACACAAACACACCTCATTACTCTCCTGTAGTGTCGAGGAGAAGCTGATTCCGAGAATCGAATTCTTCGAG
AACCTAGGGTTTTCCCGCCGGGACGCCGTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTACAGCATCAAGGAGAATCTGGAGCCGAAACTGAATTACTTCGTGGT
GGAAATGGGGAGGGAACTGAAGGAATTGAAGGAGTTTCCGCATTACTTTTCGTTTAGCTTAGAGAATAGGATTAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTAT
GTTTCCCATTGCCGGATTTGTTGAAAACCAGTGAGATGAAATTCCGGGAAAAATTGGAGGTATGTTGTGATTCTTCAATACCCTTACGAACTTCTCCTTTGTGGTGTACA
AAATTG
mRNA sequenceShow/hide mRNA sequence
CTGCAAGACGGAGCTCTCCAATTTCTCTCCAATGGCAGATTCAAATTCATCCACTCTTCTCCTTCCCCATTTTTCCCCTCAATTTCCCGCTCCTCCACAACCCTCCAACA
ATTCCCCTTCCTCTCCAATGCCACAATCTCTTTCGTTTTCCCCTCTAAACTGCCACCTCGGAGCCCCGCCGTTCCTCCCCTCTCGCCGCCGCCACTGCCCCACCCCGACC
CTCGCACCGAGTTCCAGGAGAAAATGCTCTTCCTCGACTCCATCGGCATCGACTTCTTCTCCGTCATCAAAGACCATCCTCCCGTCGCCGCCGCCTCCCTCGCTGACATC
AGATCCGCCGTCGATTTCATGACCTCCATGAACTTCACCGCCGTCGAGTTCCGGAGAATCGTCGGTATGTGCCCCGAGATCCTCACCTCTCGCGCCGCCGATCTCGTCCC
GGTCTTCACCTTCCTCCTCCGCGAGGCTCGAGTCGCCGGCTCCGACATCAAGCGCGTCGTAAATCGCCGCCCTAGGTTACTCGCCTGCAGCGTCAAGGATCGGCTCCGTC
CAACTCTCTACTTCCTACAAAGCATCGGCATATCGGAGGTACACAAACACACCTCATTACTCTCCTGTAGTGTCGAGGAGAAGCTGATTCCGAGAATCGAATTCTTCGAG
AACCTAGGGTTTTCCCGCCGGGACGCCGTGATAATGTTCCGGCGATTCCCGCAGCTGTTCTGCTACAGCATCAAGGAGAATCTGGAGCCGAAACTGAATTACTTCGTGGT
GGAAATGGGGAGGGAACTGAAGGAATTGAAGGAGTTTCCGCATTACTTTTCGTTTAGCTTAGAGAATAGGATTAAGCCGAGACATCAAAGCTGTGTGGAGAAGGGAGTAT
GTTTCCCATTGCCGGATTTGTTGAAAACCAGTGAGATGAAATTCCGGGAAAAATTGGAGGTATGTTGTGATTCTTCAATACCCTTACGAACTTCTCCTTTGTGGTGTACA
AAATTG
Protein sequenceShow/hide protein sequence
LQDGALQFLSNGRFKFIHSSPSPFFPSISRSSTTLQQFPFLSNATISFVFPSKLPPRSPAVPPLSPPPLPHPDPRTEFQEKMLFLDSIGIDFFSVIKDHPPVAAASLADI
RSAVDFMTSMNFTAVEFRRIVGMCPEILTSRAADLVPVFTFLLREARVAGSDIKRVVNRRPRLLACSVKDRLRPTLYFLQSIGISEVHKHTSLLSCSVEEKLIPRIEFFE
NLGFSRRDAVIMFRRFPQLFCYSIKENLEPKLNYFVVEMGRELKELKEFPHYFSFSLENRIKPRHQSCVEKGVCFPLPDLLKTSEMKFREKLEVCCDSSIPLRTSPLWCT
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