; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011282 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011282
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionphotosystem I reaction center subunit N, chloroplastic
Genome locationscaffold239:602509..603735
RNA-Seq ExpressionMS011282
SyntenyMS011282
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0030093 - chloroplast photosystem I (cellular component)
InterPro domainsIPR008796 - Photosystem I reaction centre subunit N, chloroplastic
IPR044907 - Photosystem I reaction centre subunit N superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604288.1 Photosystem I reaction center subunit N, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.2e-8292.98Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+L+SK++AAP VASPGV GYKLPAIRAQQARVPEAKN+GRR+ALLYLGATLFAAAAAASNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

XP_008441057.1 PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo]3.4e-8394.15Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+A P VASPGV GYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

XP_022132424.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Momordica charantia]7.8e-8899.42Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKN+GRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

XP_022950888.1 photosystem I reaction center subunit N, chloroplastic-like [Cucurbita moschata]2.2e-8292.98Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+L+SK++AAP VASPGV GYKLPAIRAQQARVPEAKN+GRR+ALLYLGATLFAAAAAASNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

XP_038883748.1 photosystem I reaction center subunit N, chloroplastic isoform X1 [Benincasa hispida]1.5e-8394.74Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+A P VASPGV GYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

TrEMBL top hitse value%identityAlignment
A0A0A0KFM1 Uncharacterized protein2.4e-8292.4Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+AAP VASPGV GYKLPAIRAQQ +VPEAKN+GRRTALLYLGA+LFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

A0A1S3B240 photosystem I reaction center subunit N, chloroplastic1.7e-8394.15Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+A P VASPGV GYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

A0A5D3DQX9 Photosystem I reaction center subunit N1.7e-8394.15Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+LNSKL+A P VASPGV GYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNS+ANAGVIE+YLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFI+DDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

A0A6J1BT08 photosystem I reaction center subunit N, chloroplastic isoform X13.8e-8899.42Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKN+GRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

A0A6J1GG47 photosystem I reaction center subunit N, chloroplastic-like1.1e-8292.98Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK
        MATMNSSVLACNYAISGAGSA+L+SK++AAP VASPGV GYKLPAIRAQQARVPEAKN+GRR+ALLYLGATLFAAAAAASNS+ANAGVIEEYLEKSKANK
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANK

Query:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        ELNDKKRLATSGANFARAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDL LECEGKDK+KCGSNVFWKW
Subjt:  ELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

SwissProt top hitse value%identityAlignment
O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment)4.4e-4183.7Show/hide
Query:  SNSNANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        +  +A A + +EYLEKSKANKELNDKKRLATSGANFARAYTVEFG+C+FP NFTGCQDLAKQKKVPFISDDL +ECEGK+KFKCGSNVFWKW
Subjt:  SNSNANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

P31093 Photosystem I reaction center subunit N, chloroplastic2.7e-4362.66Show/hide
Query:  ISGAGSAELNSKLSAA-PCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLATSGA
        ++G  ++ +  K +AA P  ASP  A            RV  A  + RR+ALL L A    AA AAS  +A A V +EYLEKSK NKELNDKKR ATSGA
Subjt:  ISGAGSAELNSKLSAA-PCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLATSGA

Query:  NFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        NFARAYTV+FG+CKFP NFTGCQDLAKQKKVPFI+DDL +ECEGK+KFKCGSNVFWKW
Subjt:  NFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

P49107 Photosystem I reaction center subunit N, chloroplastic2.2e-5666.29Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYK---LPAIRAQQARVPEAK-NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKS
        MA MNSSVL C+YAI+G+GS ELN K+      +S G    K   +P I+AQ+    +   + GRR+A+++L ATLF+ AA   +++ANAGVI+EYLE+S
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYK---LPAIRAQQARVPEAK-NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKS

Query:  KANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        K NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFIS+D+ALECEGKDK+KCGSNVFWKW
Subjt:  KANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

Q9SBN5 Photosystem I reaction center subunit N, chloroplastic9.8e-2553.03Show/hide
Query:  AIRAQQARVPEAK-----------NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT
        A+RAQ A+V  A+           +   R  LL LG  L AAA A +   ANAGV+E+ L KS ANK LN+KKRLATS AN AR+ TV  GTC+FPENF 
Subjt:  AIRAQQARVPEAK-----------NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFT

Query:  GCQDLAKQKKVPFISDDLALECEGKDKFKCGS
        GC++LA  K V +I++DL +ECEGKD   CGS
Subjt:  GCQDLAKQKKVPFISDDLALECEGKDKFKCGS

Arabidopsis top hitse value%identityAlignment
AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)1.5e-5766.29Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYK---LPAIRAQQARVPEAK-NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKS
        MA MNSSVL C+YAI+G+GS ELN K+      +S G    K   +P I+AQ+    +   + GRR+A+++L ATLF+ AA   +++ANAGVI+EYLE+S
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYK---LPAIRAQQARVPEAK-NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKS

Query:  KANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW
        K NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQKKVPFIS+D+ALECEGKDK+KCGSNVFWKW
Subjt:  KANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW

AT5G64040.2 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)7.2e-3961.64Show/hide
Query:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYK---LPAIRAQQARVPEAK-NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKS
        MA MNSSVL C+YAI+G+GS ELN K+      +S G    K   +P I+AQ+    +   + GRR+A+++L ATLF+ AA   +++ANAGVI+EYLE+S
Subjt:  MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYK---LPAIRAQQARVPEAK-NEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKS

Query:  KANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK
        K NKELNDKKRLATSGANFARA+TV+FG+CKFPENFTGCQDLAKQK
Subjt:  KANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCATGAATTCCAGTGTTCTGGCCTGCAACTACGCCATTTCCGGAGCTGGATCGGCCGAGCTCAACTCGAAACTCAGCGCCGCGCCCTGCGTCGCATCGCCTGG
GGTTGCTGGTTACAAGTTGCCTGCTATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTACCTCGGAGCCACTCTCTTTG
CTGCGGCTGCGGCTGCCTCCAACTCCAATGCTAATGCAGGAGTCATTGAAGAGTATCTTGAAAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTGGCAACT
AGTGGAGCAAATTTTGCAAGGGCATACACTGTTGAGTTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTTCCATTTAT
CTCTGATGATTTGGCTTTGGAGTGTGAGGGGAAGGACAAGTTCAAGTGTGGTTCCAATGTGTTCTGGAAATGG
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCATGAATTCCAGTGTTCTGGCCTGCAACTACGCCATTTCCGGAGCTGGATCGGCCGAGCTCAACTCGAAACTCAGCGCCGCGCCCTGCGTCGCATCGCCTGG
GGTTGCTGGTTACAAGTTGCCTGCTATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTACCTCGGAGCCACTCTCTTTG
CTGCGGCTGCGGCTGCCTCCAACTCCAATGCTAATGCAGGAGTCATTGAAGAGTATCTTGAAAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTGGCAACT
AGTGGAGCAAATTTTGCAAGGGCATACACTGTTGAGTTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTTCCATTTAT
CTCTGATGATTTGGCTTTGGAGTGTGAGGGGAAGGACAAGTTCAAGTGTGGTTCCAATGTGTTCTGGAAATGG
Protein sequenceShow/hide protein sequence
MATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLAT
SGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW