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MS011304 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011304
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein IDA-LIKE 2
Genome locationscaffold239:794411..794551
RNA-Seq ExpressionMS011304
SyntenyMS011304
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2002380.1 hypothetical protein ES319_D11G062600v1 [Gossypium barbadense]3.1e-1078.95Show/hide
Query:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +P + GHF GFLPRR PIPASGPSRKHND+GL+SWRSP
Subjt:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

KAE7998278.1 hypothetical protein FH972_002837 [Carpinus fangiana]1.8e-1091.43Show/hide
Query:  FYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        F GHF GFLPRRIPIPASGPSRKHNDIGL+SWRSP
Subjt:  FYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

KAE8647464.1 hypothetical protein Csa_004278 [Cucumis sativus]3.9e-1383.33Show/hide
Query:  PSSKEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        P +   ++YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
Subjt:  PSSKEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

KAG7034431.1 Protein IDA-LIKE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-1492.31Show/hide
Query:  KEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        K+PH YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWR+P
Subjt:  KEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

KJB40456.1 hypothetical protein B456_007G064600 [Gossypium raimondii]3.1e-1078.95Show/hide
Query:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +P + GHF GFLPRR PIPASGPSRKHND+GL+SWRSP
Subjt:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

TrEMBL top hitse value%identityAlignment
A0A0A0KFQ3 Uncharacterized protein1.9e-1383.33Show/hide
Query:  PSSKEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        P +   ++YGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
Subjt:  PSSKEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A5D2NA22 Uncharacterized protein1.5e-1078.95Show/hide
Query:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        +P + GHF GFLPRR PIPASGPSRKHND+GL+SWRSP
Subjt:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A5N6QG36 Uncharacterized protein8.7e-1191.43Show/hide
Query:  FYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        F GHF GFLPRRIPIPASGPSRKHNDIGL+SWRSP
Subjt:  FYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

A0A6J5V5G9 Uncharacterized protein1.5e-1096.97Show/hide
Query:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Subjt:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

M5W2Q5 Uncharacterized protein1.5e-1096.97Show/hide
Query:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        GHF GFLPRRIPIPASGPSRKHNDIGLRSWRSP
Subjt:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

SwissProt top hitse value%identityAlignment
Q6DUW6 Protein IDA-LIKE 42.3e-0869.7Show/hide
Query:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        GHF GFLPR +P+PAS PSRKHNDIG+++  SP
Subjt:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

Q6DUW7 Protein IDA-LIKE 33.1e-0554.05Show/hide
Query:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRS
        + H    F G LPR+ P+P SGPSRKHN+IGL S ++
Subjt:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRS

Q6DUW8 Protein IDA-LIKE 51.0e-0342.11Show/hide
Query:  FKLNNPSSKEPH-----FYG------HFFGFLPRRIPIPASGPSRKHNDIGLRSWRS
        FK+  P+ +  H     F G       F GFLP+ +PIP S PSRKHN  GL+   S
Subjt:  FKLNNPSSKEPH-----FYG------HFFGFLPRRIPIPASGPSRKHNDIGLRSWRS

Q6DUW9 Protein IDA-LIKE 25.1e-0882.14Show/hide
Query:  FFGFLPRRIPIPASGPSRKHNDIGLRSW
        F GFLPR  P+PASGPSRKHNDIGL SW
Subjt:  FFGFLPRRIPIPASGPSRKHNDIGLRSW

Arabidopsis top hitse value%identityAlignment
AT1G76952.1 inflorescence deficient in abscission (IDA)-like 57.1e-0542.11Show/hide
Query:  FKLNNPSSKEPH-----FYG------HFFGFLPRRIPIPASGPSRKHNDIGLRSWRS
        FK+  P+ +  H     F G       F GFLP+ +PIP S PSRKHN  GL+   S
Subjt:  FKLNNPSSKEPH-----FYG------HFFGFLPRRIPIPASGPSRKHNDIGLRSWRS

AT3G18715.1 inflorescence deficient in abscission (IDA)-like 41.6e-0969.7Show/hide
Query:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP
        GHF GFLPR +P+PAS PSRKHNDIG+++  SP
Subjt:  GHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP

AT5G09805.1 inflorescence deficient in abscission (IDA)-like 32.2e-0654.05Show/hide
Query:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRS
        + H    F G LPR+ P+P SGPSRKHN+IGL S ++
Subjt:  EPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRS

AT5G64667.1 inflorescence deficient in abscission (IDA)-like 23.6e-0982.14Show/hide
Query:  FFGFLPRRIPIPASGPSRKHNDIGLRSW
        F GFLPR  P+PASGPSRKHNDIGL SW
Subjt:  FFGFLPRRIPIPASGPSRKHNDIGLRSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTAAGCTCAACAATCCAAGCTCAAAAGAGCCTCATTTTTATGGCCATTTCTTTGGATTCTTGCCCAGAAGAATACCGATTCCAGCCTCTGGCCCCTCCAGAAAACACAA
CGATATTGGCTTGAGGAGTTGGAGATCGCCC
mRNA sequenceShow/hide mRNA sequence
TTTAAGCTCAACAATCCAAGCTCAAAAGAGCCTCATTTTTATGGCCATTTCTTTGGATTCTTGCCCAGAAGAATACCGATTCCAGCCTCTGGCCCCTCCAGAAAACACAA
CGATATTGGCTTGAGGAGTTGGAGATCGCCC
Protein sequenceShow/hide protein sequence
FKLNNPSSKEPHFYGHFFGFLPRRIPIPASGPSRKHNDIGLRSWRSP