; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011309 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011309
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationscaffold239:844507..845091
RNA-Seq ExpressionMS011309
SyntenyMS011309
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604272.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia]3.1e-6465.88Show/hide
Query:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGL-VVHPKGVRRNALKKFPTVEY---SNKLV
        RRLLL   TA+     +PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCS+LL   S  + GG+  VHPKGVRRN LKKFPTVEY    NKL 
Subjt:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGL-VVHPKGVRRNALKKFPTVEY---SNKLV

Query:  GAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA-------------VADPPPPPLAAEH---NLVIAPL
        G    +DGECVICL EFE G+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN L+D T  KIA               DPPPPP   E    N+VIAP+
Subjt:  GAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA-------------VADPPPPPLAAEH---NLVIAPL

Query:  ERENLICNYRE
        ERE L+CNYR+
Subjt:  ERENLICNYRE

XP_008441014.1 PREDICTED: RING-H2 finger protein ATL78 [Cucumis melo]4.0e-6463.18Show/hide
Query:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-
        + + R  L PS  AA S PE   PRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCSTLL+        G LVVHPKGVRRN LKKFPTVEYS 
Subjt:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-

Query:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD------------------ATARKIAVADPPPPPLAAE
          NKL G    +DGECVICL EFEAG+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN L+D                  ATA + + +  PP     E
Subjt:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD------------------ATARKIAVADPPPPPLAAE

Query:  HNLVIAPLERENLICNYRES
         N+VIAP+ERE +I NYRES
Subjt:  HNLVIAPLERENLICNYRES

XP_022949633.1 RING-H2 finger protein ATL78-like [Cucurbita moschata]3.1e-6466.19Show/hide
Query:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGL-VVHPKGVRRNALKKFPTVEY---SNKLV
        RRLLL   TA+   S +PRPGFGSFDMNVVMVLSVLLCALVCSLGLNA+LKCALRCS+LL   S  + GG+  VHPKGVRRN LKKFPTVEY    NKL 
Subjt:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGL-VVHPKGVRRNALKKFPTVEY---SNKLV

Query:  GAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA-------------VADPPPPPLAAEH---NLVIAPL
        G    +DGECVICL+EFE G+R+R+LP CFHGFHVHCIDKWL+SH SCPKCRN L+D T  KIA               DPPPPP   E    N+VIAP+
Subjt:  GAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA-------------VADPPPPPLAAEH---NLVIAPL

Query:  ERENLICNYR
        ERE L+CNYR
Subjt:  ERENLICNYR

XP_023518448.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo]3.1e-6464.93Show/hide
Query:  RRLLLYPSTAAA----GSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGLVVHPKGVRRNALKKFPTVEY---SN
        RR LL  +TA A     S P+PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL   SA   G L +HPKGV RN LKKFPTVEY   SN
Subjt:  RRLLLYPSTAAA----GSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGLVVHPKGVRRNALKKFPTVEY---SN

Query:  KLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI------------AVADPPPPPLAAEHNLVIAPLE
        K    G+ +DGECVICLA+FE G+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN LSD T+RK+            +   PPPP      N+ IAP+E
Subjt:  KLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI------------AVADPPPPPLAAEHNLVIAPLE

Query:  RENLICNYRES
        RE L C+YR+S
Subjt:  RENLICNYRES

XP_038882744.1 RING-H2 finger protein ATL78 [Benincasa hispida]2.4e-6464.38Show/hide
Query:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-
        + + R LL PS  AA S PE   PRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCSTLL+        G LVVHPKGVRRN LKKFPTVEYS 
Subjt:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-

Query:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDA--------------TARKIAVADPPPPPLAAEH---
          NKL G    +DGECVICL EFEAG+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN L+D               T   +A +     P AAE    
Subjt:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDA--------------TARKIAVADPPPPPLAAEH---

Query:  NLVIAPLERENLICNYRES
        N+VIAP+ERE LI NYRES
Subjt:  NLVIAPLERENLICNYRES

TrEMBL top hitse value%identityAlignment
A0A0A0KF92 RING-type E3 ubiquitin transferase8.2e-6362.21Show/hide
Query:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-
        + + R  L PS   A + PE   PRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCSTLL+        G LVVHPKGVRRN LKKFPTVEYS 
Subjt:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-

Query:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD---------------ATARKIAVADPPPPPLAAEHNL
          NKL G    +DGECVICL EFEAG+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN L+D                TA + + +  PP       N+
Subjt:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD---------------ATARKIAVADPPPPPLAAEHNL

Query:  VIAPLERENLICNYRES
        VIAP+ERE +I NYRES
Subjt:  VIAPLERENLICNYRES

A0A1S3B203 RING-type E3 ubiquitin transferase2.0e-6463.18Show/hide
Query:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-
        + + R  L PS  AA S PE   PRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCSTLL+        G LVVHPKGVRRN LKKFPTVEYS 
Subjt:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-

Query:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD------------------ATARKIAVADPPPPPLAAE
          NKL G    +DGECVICL EFEAG+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN L+D                  ATA + + +  PP     E
Subjt:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD------------------ATARKIAVADPPPPPLAAE

Query:  HNLVIAPLERENLICNYRES
         N+VIAP+ERE +I NYRES
Subjt:  HNLVIAPLERENLICNYRES

A0A5A7SLG8 RING-type E3 ubiquitin transferase2.0e-6463.18Show/hide
Query:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-
        + + R  L PS  AA S PE   PRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCSTLL+        G LVVHPKGVRRN LKKFPTVEYS 
Subjt:  LPHRRLLLYPSTAAAGSSPE---PRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ----SGGLVVHPKGVRRNALKKFPTVEYS-

Query:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD------------------ATARKIAVADPPPPPLAAE
          NKL G    +DGECVICL EFEAG+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN L+D                  ATA + + +  PP     E
Subjt:  --NKLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSD------------------ATARKIAVADPPPPPLAAE

Query:  HNLVIAPLERENLICNYRES
         N+VIAP+ERE +I NYRES
Subjt:  HNLVIAPLERENLICNYRES

A0A6J1GCL7 RING-type E3 ubiquitin transferase1.5e-6466.19Show/hide
Query:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGL-VVHPKGVRRNALKKFPTVEY---SNKLV
        RRLLL   TA+   S +PRPGFGSFDMNVVMVLSVLLCALVCSLGLNA+LKCALRCS+LL   S  + GG+  VHPKGVRRN LKKFPTVEY    NKL 
Subjt:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGL-VVHPKGVRRNALKKFPTVEY---SNKLV

Query:  GAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA-------------VADPPPPPLAAEH---NLVIAPL
        G    +DGECVICL+EFE G+R+R+LP CFHGFHVHCIDKWL+SH SCPKCRN L+D T  KIA               DPPPPP   E    N+VIAP+
Subjt:  GAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA-------------VADPPPPPLAAEH---NLVIAPL

Query:  ERENLICNYR
        ERE L+CNYR
Subjt:  ERENLICNYR

A0A6J1HJ58 RING-type E3 ubiquitin transferase2.8e-6363.85Show/hide
Query:  RRLLLYPSTAAA----GSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGLVVHPKGVRRNALKKFPTVEY---SN
        RR LL  +TA A     S P+PRPGFGSFD+NVVMVLSVLLCALV SLGLNAILKCALRCSTLL   SA   G + +HPKGV RN LKKFPTVEY   SN
Subjt:  RRLLLYPSTAAA----GSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLL---SAAQSGGLVVHPKGVRRNALKKFPTVEY---SN

Query:  KLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI------------AVADPPPPPLAAE--HNLVIAP
        K    G+ +DGECVICLA+FE G+R+R+LPKC+HGFHVHCIDKWL+SH SCPKCRN LSD T+RK+            +   PPPPP + E   N+ IAP
Subjt:  KLVGAGMVLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI------------AVADPPPPPLAAE--HNLVIAP

Query:  LERENLICNYRES
        +ERE L C+YR+S
Subjt:  LERENLICNYRES

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL101.4e-3045.45Show/hide
Query:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ-----SGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC
        NV+M+LS+L+C ++C LGL+ I++CALR ST    ++     S       KG+++ AL+ FP V YS ++   G  LD ECVICL++F +GE+LRLLPKC
Subjt:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ-----SGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC

Query:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIAVADPPPPPLAAEHN----LVIAPLERENLI
         HGFHV CIDKWL  H +CPKCRN L + T +KI         + AE      + I PLE   ++
Subjt:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIAVADPPPPPLAAEHN----LVIAPLERENLI

Q6NML0 E3 ubiquitin-protein ligase ATL765.2e-3043.86Show/hide
Query:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP-----KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC
        NV+M+LSVL+C ++C LGL+ I++CA R S+    ++    +  P     KG+++ AL+ FP V YS ++   G  +  ECVICL++F +GE+LRLLPKC
Subjt:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP-----KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC

Query:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI----AVADPPPPPLAAEHNLVIAPLERENLICNYRES
         HGFHV CIDKWL  H +CPKCR+ L + T +KI    + AD           + I PLE E  +  +RES
Subjt:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI----AVADPPPPPLAAEHNLVIAPLERENLICNYRES

Q6NQG7 RING-H2 finger protein ATL781.9e-4050.25Show/hide
Query:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGG---LVVHPKGVRRNALKKFPTVEYSNKLVGAGM
        R+LL +    +   +P P  G  +FD NVVMVLSVLLCALVCSLGLN+I++CALRCS L+ +   G    + +   GV+R ALK F TV YS +L   G 
Subjt:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGG---LVVHPKGVRRNALKKFPTVEYSNKLVGAGM

Query:  VLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---------VADPPPPPLAAEHNLVIAPLERENLICNYR
         LD EC ICL+EF A ER++LLP C HGFHV CIDKWL+SH+SCP CR+ L   T  KIA            PP   +     L IAPLE E  I  +R
Subjt:  VLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---------VADPPPPPLAAEHNLVIAPLERENLICNYR

Q9LS99 RING-H2 finger protein ATL774.7e-3141.34Show/hide
Query:  PGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP------KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAG
        P   +   NV+M+LS+LLC ++CSLGL+ I++CA   S     +    +   P      KG+++ ALK  P V YS ++   G  +  ECVICL++F AG
Subjt:  PGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP------KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAG

Query:  ERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---VADPPPPPLAAEHNLVIAPLERENLICNYRES
        E+LR+LPKC HGFH+ CIDKWLT H +CPKCR+ L D   + ++    AD          ++ I+PLE E  +  +RES
Subjt:  ERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---VADPPPPPLAAEHNLVIAPLERENLICNYRES

Q9LZV8 RING-H2 finger protein ATL747.2e-3251.2Show/hide
Query:  SFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKCF
        +FD N+V++L+ LLCAL+ +LGLN+IL+CA+RC   LS++ + G V    G+++  LKKFP  EY +   G   +   EC ICL EF  GER+R+LP C 
Subjt:  SFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKCF

Query:  HGFHVHCIDKWLTSHASCPKCRNSL
        H FH+ CID WL SH+SCP CR+SL
Subjt:  HGFHVHCIDKWLTSHASCPKCRNSL

Arabidopsis top hitse value%identityAlignment
AT1G49210.1 RING/U-box superfamily protein3.7e-3143.86Show/hide
Query:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP-----KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC
        NV+M+LSVL+C ++C LGL+ I++CA R S+    ++    +  P     KG+++ AL+ FP V YS ++   G  +  ECVICL++F +GE+LRLLPKC
Subjt:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP-----KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC

Query:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI----AVADPPPPPLAAEHNLVIAPLERENLICNYRES
         HGFHV CIDKWL  H +CPKCR+ L + T +KI    + AD           + I PLE E  +  +RES
Subjt:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKI----AVADPPPPPLAAEHNLVIAPLERENLICNYRES

AT1G49220.1 RING/U-box superfamily protein9.7e-3245.45Show/hide
Query:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ-----SGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC
        NV+M+LS+L+C ++C LGL+ I++CALR ST    ++     S       KG+++ AL+ FP V YS ++   G  LD ECVICL++F +GE+LRLLPKC
Subjt:  NVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQ-----SGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKC

Query:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIAVADPPPPPLAAEHN----LVIAPLERENLI
         HGFHV CIDKWL  H +CPKCRN L + T +KI         + AE      + I PLE   ++
Subjt:  FHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIAVADPPPPPLAAEHN----LVIAPLERENLI

AT1G49230.1 RING/U-box superfamily protein1.3e-4150.25Show/hide
Query:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGG---LVVHPKGVRRNALKKFPTVEYSNKLVGAGM
        R+LL +    +   +P P  G  +FD NVVMVLSVLLCALVCSLGLN+I++CALRCS L+ +   G    + +   GV+R ALK F TV YS +L   G 
Subjt:  RRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGG---LVVHPKGVRRNALKKFPTVEYSNKLVGAGM

Query:  VLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---------VADPPPPPLAAEHNLVIAPLERENLICNYR
         LD EC ICL+EF A ER++LLP C HGFHV CIDKWL+SH+SCP CR+ L   T  KIA            PP   +     L IAPLE E  I  +R
Subjt:  VLDGECVICLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---------VADPPPPPLAAEHNLVIAPLERENLICNYR

AT3G18773.1 RING/U-box superfamily protein3.3e-3241.34Show/hide
Query:  PGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP------KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAG
        P   +   NV+M+LS+LLC ++CSLGL+ I++CA   S     +    +   P      KG+++ ALK  P V YS ++   G  +  ECVICL++F AG
Subjt:  PGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHP------KGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAG

Query:  ERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---VADPPPPPLAAEHNLVIAPLERENLICNYRES
        E+LR+LPKC HGFH+ CIDKWLT H +CPKCR+ L D   + ++    AD          ++ I+PLE E  +  +RES
Subjt:  ERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIA---VADPPPPPLAAEHNLVIAPLERENLICNYRES

AT5G01880.1 RING/U-box superfamily protein5.1e-3351.2Show/hide
Query:  SFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKCF
        +FD N+V++L+ LLCAL+ +LGLN+IL+CA+RC   LS++ + G V    G+++  LKKFP  EY +   G   +   EC ICL EF  GER+R+LP C 
Subjt:  SFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVICLAEFEAGERLRLLPKCF

Query:  HGFHVHCIDKWLTSHASCPKCRNSL
        H FH+ CID WL SH+SCP CR+SL
Subjt:  HGFHVHCIDKWLTSHASCPKCRNSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGCAACTCCCTCATCGGAGGTTGCTGCTCTACCCATCAACCGCGGCGGCCGGCAGTTCTCCGGAGCCCCGCCCTGGGTTCGGGAGCTTCGACATGAACGTAGTGATGGT
GCTGTCGGTGCTCCTCTGCGCTCTGGTGTGCTCCCTCGGCCTCAACGCCATTCTGAAGTGCGCCTTACGCTGCTCCACTCTGCTGTCCGCGGCGCAATCGGGCGGCCTCG
TGGTCCACCCGAAAGGTGTTCGACGAAATGCCTTAAAGAAATTCCCGACGGTGGAGTACTCCAACAAATTAGTGGGAGCCGGAATGGTGCTCGACGGGGAGTGCGTGATT
TGCCTGGCGGAGTTCGAGGCAGGGGAGCGCCTTCGGCTGCTCCCCAAATGCTTCCATGGCTTCCACGTCCATTGCATCGATAAGTGGCTCACTTCTCACGCCTCTTGCCC
CAAATGCCGCAATTCCCTCTCCGACGCTACTGCCCGGAAGATCGCCGTCGCCGACCCACCTCCGCCACCCCTCGCGGCGGAGCACAACCTTGTTATTGCTCCGCTGGAAC
GGGAAAATTTGATCTGCAATTATAGGGAAAGTAGA
mRNA sequenceShow/hide mRNA sequence
ACGCAACTCCCTCATCGGAGGTTGCTGCTCTACCCATCAACCGCGGCGGCCGGCAGTTCTCCGGAGCCCCGCCCTGGGTTCGGGAGCTTCGACATGAACGTAGTGATGGT
GCTGTCGGTGCTCCTCTGCGCTCTGGTGTGCTCCCTCGGCCTCAACGCCATTCTGAAGTGCGCCTTACGCTGCTCCACTCTGCTGTCCGCGGCGCAATCGGGCGGCCTCG
TGGTCCACCCGAAAGGTGTTCGACGAAATGCCTTAAAGAAATTCCCGACGGTGGAGTACTCCAACAAATTAGTGGGAGCCGGAATGGTGCTCGACGGGGAGTGCGTGATT
TGCCTGGCGGAGTTCGAGGCAGGGGAGCGCCTTCGGCTGCTCCCCAAATGCTTCCATGGCTTCCACGTCCATTGCATCGATAAGTGGCTCACTTCTCACGCCTCTTGCCC
CAAATGCCGCAATTCCCTCTCCGACGCTACTGCCCGGAAGATCGCCGTCGCCGACCCACCTCCGCCACCCCTCGCGGCGGAGCACAACCTTGTTATTGCTCCGCTGGAAC
GGGAAAATTTGATCTGCAATTATAGGGAAAGTAGA
Protein sequenceShow/hide protein sequence
TQLPHRRLLLYPSTAAAGSSPEPRPGFGSFDMNVVMVLSVLLCALVCSLGLNAILKCALRCSTLLSAAQSGGLVVHPKGVRRNALKKFPTVEYSNKLVGAGMVLDGECVI
CLAEFEAGERLRLLPKCFHGFHVHCIDKWLTSHASCPKCRNSLSDATARKIAVADPPPPPLAAEHNLVIAPLERENLICNYRESR