CuGenDBv2

Gene ID	MS011312
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold239:888418..888960
RNA-Seq Expression	MS011312
Synteny	MS011312
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008441005.1 PREDICTED: uncharacterized protein LOC103485248 [Cucumis melo]

2.9e-80

83.16

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MAD+E+Q RQHPSISK+TALQALNTIIQLHFEKTLEKKRAIDLQKK LH LFQLFFIFL L+FL QSLSPRL+CRH WIPI+LLSVSHLSFYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLG AT++LRE+K   SAA          D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

XP_011657774.1 uncharacterized protein LOC101206076 [Cucumis sativus]

1.4e-79

82.11

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MAD+++Q RQHPSISK+TALQALNTIIQLHFEKTLEKKRAIDLQKK LH LFQLFFIFL L+FL QSLSPRL+CRH WIPI+LLSVSHLSFYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLG AT++LRE++   SAA          D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

XP_022133031.1 uncharacterized protein LOC111005723 [Momordica charantia]

9.2e-95

99.45

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MADLESQPRQHPSI KDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

XP_022949634.1 uncharacterized protein LOC111452966 [Cucurbita moschata]

5.0e-77

80.95

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MADLE+  R HPSIS +TALQALNT+IQLHFEKTLEKK AIDLQKK LHNLF LFFIFL L+FLAQSLSPRLQCRH WIPI+LLS+SHL+FYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD--------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CIN FKYQRRCHKLTLGLAT+KLR +K   S A         D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD--------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

XP_038883211.1 uncharacterized protein LOC120074230 [Benincasa hispida]

2.0e-81

83.33

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MAD+E+Q RQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKK LH LFQLFFIFLGL+FLAQSLSPRL+CRH WIPI+LLS+SHLSFYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD-----------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLG AT++LREIK   SAA            D+EFEIHYQEPPESYLGKFKRNWAL+FGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD-----------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV5 Uncharacterized protein

6.9e-80

82.11

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MAD+++Q RQHPSISK+TALQALNTIIQLHFEKTLEKKRAIDLQKK LH LFQLFFIFL L+FL QSLSPRL+CRH WIPI+LLSVSHLSFYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLG AT++LRE++   SAA          D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

A0A1S3B333 uncharacterized protein LOC103485248

1.4e-80

83.16

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MAD+E+Q RQHPSISK+TALQALNTIIQLHFEKTLEKKRAIDLQKK LH LFQLFFIFL L+FL QSLSPRL+CRH WIPI+LLSVSHLSFYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLG AT++LRE+K   SAA          D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAA---------DDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

A0A6J1BTW4 uncharacterized protein LOC111005723

4.4e-95

99.45

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MADLESQPRQHPSI KDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CINGFKYQRRCHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

A0A6J1GDE2 uncharacterized protein LOC111452966

2.4e-77

80.95

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MADLE+  R HPSIS +TALQALNT+IQLHFEKTLEKK AIDLQKK LHNLF LFFIFL L+FLAQSLSPRLQCRH WIPI+LLS+SHL+FYVSVA TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD--------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CIN FKYQRRCHKLTLGLAT+KLR +K   S A         D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD--------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

A0A6J1IL37 uncharacterized protein LOC111478021

4.2e-77

80.42

Show/hide

Query:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR
        MADLE+  R HPSIS +TALQALNT+IQLHFEKTLEKK AIDLQKK LHNLF LFFIFL L+FLAQSLSPRLQCRH WIPI+LLS+SHL+FYVS+A TLR
Subjt:  MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLR

Query:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD--------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS
        CIN FKYQRRCHKLTLGLAT+KLR +K   S A         D+EFEIHYQEPPESYLGKFKRNWALHFGFLIFIY FMISSSVVLLCS
Subjt:  CINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD--------DDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G18800.1 unknown protein

1.3e-62

66.84

Show/hide

Query:  MADLESQPRQH--PSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSL-SPRLQCRHSWIPISLLSVSHLSFYVSVAH
        MAD + +  Q+  P I K+TALQALN+IIQLHFEKTLEKKRAID QKK LH LFQLFFIFL ++F + S  S RL CRH W PI LLS SHL FYVSVA 
Subjt:  MADLESQPRQH--PSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSL-SPRLQCRHSWIPISLLSVSHLSFYVSVAH

Query:  TLRCINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD-------DD------EFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLC
        TLRCINGFKYQRRCHKLTLGLAT KLR IK+  +A D       D+      + E+ YQEPP+SY GKFKRNWAL+FGFLI +Y FMIS SVV+LC
Subjt:  TLRCINGFKYQRRCHKLTLGLATQKLREIKTSSSAAD-------DD------EFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGATTTGGAGAGCCAGCCCCGGCAGCACCCATCGATCTCCAAGGACACGGCCCTCCAGGCCCTGAACACCATAATCCAGCTCCATTTCGAGAAGACCCTCGAGAA
GAAACGCGCCATAGATCTCCAGAAGAAGCACCTCCACAATCTGTTCCAGCTGTTCTTCATCTTCCTCGGCCTCATGTTCCTGGCCCAGTCCCTGTCCCCTCGGCTCCAGT
GCCGCCACTCCTGGATCCCAATTTCTCTCCTCTCCGTTTCCCATCTCAGCTTCTACGTCTCCGTCGCCCACACCCTCCGCTGCATCAACGGCTTCAAGTACCAGCGCCGC
TGCCACAAGCTCACTCTCGGCCTCGCCACCCAGAAGCTCAGGGAGATCAAGACCTCCTCCTCCGCCGCCGACGACGACGAATTCGAGATTCACTACCAGGAGCCGCCGGA
GAGCTACTTGGGTAAGTTCAAGAGGAATTGGGCTCTGCATTTTGGCTTCTTGATCTTCATCTATGCCTTTATGATCTCTTCCTCTGTTGTTCTCCTCTGTTCT

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MADLESQPRQHPSISKDTALQALNTIIQLHFEKTLEKKRAIDLQKKHLHNLFQLFFIFLGLMFLAQSLSPRLQCRHSWIPISLLSVSHLSFYVSVAHTLRCINGFKYQRR
CHKLTLGLATQKLREIKTSSSAADDDEFEIHYQEPPESYLGKFKRNWALHFGFLIFIYAFMISSSVVLLCS

MS011312 (gene) of Bitter gourd (TR) v1 genome