; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011316 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011316
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWD repeat domain-containing protein 83
Genome locationscaffold239:936741..938874
RNA-Seq ExpressionMS011316
SyntenyMS011316
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025565.1 WD repeat domain-containing protein 83 [Cucumis melo var. makuwa]5.8e-15796.39Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKE+NVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYS
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDG++YFWDLVDASVVS FRAHSSVVSLYS
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYS

KAG6604265.1 WD repeat domain-containing protein 83, partial [Cucurbita argyrosperma subsp. sororia]8.4e-15697.08Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKEANVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVS
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDGYIYFWDLVDASVVS FRAHSSVV+
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVS

XP_008440996.1 PREDICTED: WD repeat domain-containing protein 83 [Cucumis melo]2.4e-15594.62Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKE+NVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDG++YFWDLVDASVVS FRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

XP_022133372.1 WD repeat domain-containing protein 83 [Momordica charantia]2.0e-15797.49Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVATGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDR SGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

XP_022949610.1 WD repeat domain-containing protein 83 [Cucurbita moschata]3.8e-15695.34Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKEANVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDGYIYFWDLVDASVVS FRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

TrEMBL top hitse value%identityAlignment
A0A1S3B1Y9 WD repeat domain-containing protein 831.2e-15594.62Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKE+NVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDG++YFWDLVDASVVS FRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

A0A5D3CQ40 WD repeat domain-containing protein 832.8e-15796.39Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKE+NVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYS
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDG++YFWDLVDASVVS FRAHSSVVSLYS
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYS

A0A6J1BWH4 WD repeat domain-containing protein 839.7e-15897.49Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVATGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDR SGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

A0A6J1GD83 WD repeat domain-containing protein 831.8e-15695.34Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKEANVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEY+SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDGYIYFWDLVDASVVS FRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

A0A6J1IRS5 WD repeat domain-containing protein 832.0e-15594.98Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MSVSELPTKEANVLKGHEG VLAARFN+DGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNE +SVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFD+RIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTN DAHVTGGSEDGYIYFWDLVDASVVS FRAHSSVV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

SwissProt top hitse value%identityAlignment
Q3KQ62 WD repeat domain-containing protein 833.1e-8452.36Show/hide
Query:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE
        ELP K  + L+ ++GAV A RFN DGNYC++CG D++++LWNPH+G  +KTY  HG EV D   + DNS+LCSC  D+ V  WDVA G+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE

Query:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE ++V++S   D S+R WDCRS   + IQI+D   D + SV ++  EI+ GSVDG +R +D+R G   +D LG P+ C+S S D+ C+LAS L
Subjt:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        DSTLRLLD+ +GELL EY GH   SYKLD CL+  D HV   SEDG + FWDLV+ S+V       +VV   SF+
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

Q5BLX8 WD repeat domain-containing protein 833.1e-8452.36Show/hide
Query:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE
        ELP K+   L   +GAV A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDVATG+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE

Query:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE ++V++S   D S+R WDCRS   EP+Q +D   D + SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        DSTLRLLD+ +GELL EY GH  + YKLDCCL+  D HV   SEDG ++FWDLV+ S+  +    S+VV   +++
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

Q5XGI5 WD repeat domain-containing protein 831.8e-8452Show/hide
Query:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE
        ELP K  + L+ ++GAV A RFN DGNYC++CG D+T++LWNPH+G  +KTY  HG EV D   + DNS++CSC  D+ V  WDVA G+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE

Query:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE ++V++S   D S+R WDCRS   E IQI+D   D + S+ ++  EI+ GSVDG +R +D+R G   +D LG P+ C+S S D+ C+LAS L
Subjt:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        DSTLRLLD+ +GELL EY GH   SYKLD CL+  D HV   SEDG + FWDLV+ S+V       + V   SF+
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

Q9BRX9 WD repeat domain-containing protein 833.1e-8452.36Show/hide
Query:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE
        ELP K    L   +GAV A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDVA+G+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE

Query:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE ++V++S   D S+R WDCRS   EP+Q +D   D V SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        DSTLRLLD+ +GELL EYKGH  + YKLDCCL+  D HV   SEDG ++FWDLV+ ++  +    S VV   +++
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

Q9DAJ4 WD repeat domain-containing protein 831.2e-8352Show/hide
Query:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE
        ELP K    L   +GAV A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDVATG+V+RKFRGH G+
Subjt:  ELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGE

Query:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE ++V++S   D S+R WDCRS   EP+Q +D   D + SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        DSTLRLLD+ +GELL EY GH  + YKLDCCL+  D HV   SEDG ++FWDLV+ ++  +    S+VV   +++
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

Arabidopsis top hitse value%identityAlignment
AT3G49660.1 Transducin/WD40 repeat-like superfamily protein6.9e-3127.92Show/hide
Query:  SVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIR
        + S  P   +  L  H  AV + +F++DG    S   D+TIR +     N      ++ +  H   + DV  + D   + S   D+ +  WDV TG +I+
Subjt:  SVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIR

Query:  KFRGHDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDIRIG---REISDNLGQPVNCIS
           GH      V FN  S+++VS  +D+++R WD  +     ++++   SD V +V   +  S I+  S DG  R +D   G   + + D+   PV+ + 
Subjt:  KFRGHDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDIRIG---REISDNLGQPVNCIS

Query:  MSNDANCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLT-NNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVV
         S +   IL   LD+TLRL + SS + L+ Y GH    Y +    +  N   +  GSED  ++ W+L    ++     H+  V
Subjt:  MSNDANCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLT-NNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVV

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein6.2e-3228.1Show/hide
Query:  PTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATG-RVIRKFRGHDGEV
        P +    L+GH  A+   +F+ DGN   S   D+T+ LW+      I  Y+ H   + D+  + D+   CS   D  +  WD  +    ++  RGH   V
Subjt:  PTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATG-RVIRKFRGHDGEV

Query:  NAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDIRIG---REISDNLGQPVNCISMSNDANCIL
          V FN  S+++VS  +D+++R W+ ++     +++I   S  + SV   +  S I+  S DG+ + +D + G   + + D+    V+    S +   IL
Subjt:  NAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDIRIG---REISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLT-NNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVV
         + LDSTL+L + ++G+ L+ Y GHT K + +    +  N  ++  GSED  +Y WDL   +++     H+  V
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLT-NNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVV

AT4G15900.1 pleiotropic regulatory locus 11.5e-2225.98Show/hide
Query:  PTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGEVN
        P K   V++GH G V +  F+    +  +   DRTI++W+   G+   T   H  +VR + V+  ++ + S G D+QV  WD+   +VIR + GH   V 
Subjt:  PTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGEVN

Query:  AVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCL--TKSEIIGGSVDGTVRTFDIRIGREIS--DNLGQPVNCISMSNDANCILAS
         +  +    V+++ G D   R WD R+     I  +    ++V SV    T  +++ GS D T++ +D+R G+ +S   +  + V  +++    N   ++
Subjt:  AVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCL--TKSEIIGGSVDGTVRTFDIRIGREIS--DNLGQPVNCISMSNDANCILAS

Query:  CLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWD
          D+T +      GE          +   ++    N D  +  G ++G I+FWD
Subjt:  CLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWD

AT5G50230.1 Transducin/WD40 repeat-like superfamily protein1.2e-3028.17Show/hide
Query:  SELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDG
        S +P+  AN +  HEG   +  F  +     + G+DR +++W+ + G  IK+       + D+ VT DN  + +      +F WDV++GRV     GH  
Subjt:  SELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDG

Query:  EVNAVKFNEYSS-VVVSAGYDQSLRAWDC-RSHSTEPIQIIDTFSDSVMSVCLTKS--EIIGGSVDGTVRTFDIRIGREISDNLG--QPVNCISMSNDAN
        +V AV  +++SS  VVSA YD++++ WD  + + T  +     F+ +  ++CL+     +  G +DG +R +DI+ G+ +S+  G    V  +S+S + N
Subjt:  EVNAVKFNEYSS-VVVSAGYDQSLRAWDC-RSHSTEPIQIIDTFSDSVMSVCLTKS--EIIGGSVDGTVRTFDIRIGREISDNLG--QPVNCISMSNDAN

Query:  CILASCLDSTLRLLDRSSGELLQEYK--GHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
         IL S  D+   + D  + E+    +  G+   S     C++ +D +V  GS DG ++ W L   ++VS  +  +S +   S++
Subjt:  CILASCLDSTLRLLDRSSGELLQEYK--GHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN

AT5G64730.1 Transducin/WD40 repeat-like superfamily protein2.2e-13881.36Show/hide
Query:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG
        MS +ELPTKEA++LKGHEGAVLAARFN DGNY L+CGKDRTIRLWNPHRGI IKTYKSHGREVRDVHVT DN+K CSCGGDRQV+YWDV+TGRVIRKFRG
Subjt:  MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRG

Query:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFN+ SSVVVSAG+D+SLR WDCRSHS EP+QIIDTF D+VMSV LTK+EIIGGSVDGTVRTFD+RIGRE+SDNLGQPVNCIS+SND NC+L
Subjt:  HDGEVNAVKFNEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN
        A CLDSTLRLLDR++GELLQ YKGH  KS+K DCCLTN+DAHV GGSEDG ++FWDLVDA V+S FRAH  VV+  S++
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTATCGGAATTACCAACTAAGGAGGCTAACGTCCTCAAGGGGCATGAAGGTGCAGTTCTAGCCGCGAGGTTCAATGCAGATGGCAATTATTGCCTCAGCTGTGG
CAAGGACCGCACTATTCGCCTTTGGAATCCTCACCGTGGTATCCACATTAAGACCTACAAATCACATGGCCGTGAAGTCCGTGATGTCCATGTCACCCCAGACAACTCCA
AGTTATGTTCTTGCGGTGGTGATCGGCAAGTCTTCTATTGGGATGTAGCTACAGGTCGTGTAATTCGAAAGTTCCGTGGTCATGATGGCGAGGTGAATGCTGTGAAATTT
AATGAGTATTCTTCTGTAGTAGTCTCAGCAGGCTATGATCAATCATTGCGTGCTTGGGATTGCAGATCCCACAGCACTGAGCCAATTCAGATCATTGATACATTTTCAGA
CAGTGTAATGTCTGTTTGCTTAACAAAAAGTGAAATTATTGGAGGAAGTGTTGATGGCACAGTTCGAACATTTGACATACGAATCGGCAGAGAAATATCAGATAACTTGG
GGCAGCCTGTAAACTGTATCTCCATGTCCAATGATGCTAATTGCATATTAGCTAGTTGCTTAGATTCCACTCTCCGTCTATTGGACAGGTCTTCTGGCGAGCTATTACAG
GAATATAAAGGCCATACTTGTAAGTCTTACAAGCTGGATTGCTGCCTTACCAATAATGATGCACATGTAACTGGCGGATCTGAAGATGGATACATTTATTTTTGGGATTT
AGTAGATGCATCTGTTGTCTCCAGTTTCCGAGCCCATTCCTCTGTTGTAAGTTTGTATTCCTTCAAC
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTATCGGAATTACCAACTAAGGAGGCTAACGTCCTCAAGGGGCATGAAGGTGCAGTTCTAGCCGCGAGGTTCAATGCAGATGGCAATTATTGCCTCAGCTGTGG
CAAGGACCGCACTATTCGCCTTTGGAATCCTCACCGTGGTATCCACATTAAGACCTACAAATCACATGGCCGTGAAGTCCGTGATGTCCATGTCACCCCAGACAACTCCA
AGTTATGTTCTTGCGGTGGTGATCGGCAAGTCTTCTATTGGGATGTAGCTACAGGTCGTGTAATTCGAAAGTTCCGTGGTCATGATGGCGAGGTGAATGCTGTGAAATTT
AATGAGTATTCTTCTGTAGTAGTCTCAGCAGGCTATGATCAATCATTGCGTGCTTGGGATTGCAGATCCCACAGCACTGAGCCAATTCAGATCATTGATACATTTTCAGA
CAGTGTAATGTCTGTTTGCTTAACAAAAAGTGAAATTATTGGAGGAAGTGTTGATGGCACAGTTCGAACATTTGACATACGAATCGGCAGAGAAATATCAGATAACTTGG
GGCAGCCTGTAAACTGTATCTCCATGTCCAATGATGCTAATTGCATATTAGCTAGTTGCTTAGATTCCACTCTCCGTCTATTGGACAGGTCTTCTGGCGAGCTATTACAG
GAATATAAAGGCCATACTTGTAAGTCTTACAAGCTGGATTGCTGCCTTACCAATAATGATGCACATGTAACTGGCGGATCTGAAGATGGATACATTTATTTTTGGGATTT
AGTAGATGCATCTGTTGTCTCCAGTTTCCGAGCCCATTCCTCTGTTGTAAGTTTGTATTCCTTCAAC
Protein sequenceShow/hide protein sequence
MSVSELPTKEANVLKGHEGAVLAARFNADGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTPDNSKLCSCGGDRQVFYWDVATGRVIRKFRGHDGEVNAVKF
NEYSSVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDIRIGREISDNLGQPVNCISMSNDANCILASCLDSTLRLLDRSSGELLQ
EYKGHTCKSYKLDCCLTNNDAHVTGGSEDGYIYFWDLVDASVVSSFRAHSSVVSLYSFN