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MS011319 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011319
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold239:961627..961995
RNA-Seq ExpressionMS011319
SyntenyMS011319
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025567.1 hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa]7.3e-2764.29Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEE-LEEDRNSICRPKKRRSR
        MEEESS SRN EEVLGAAQQLMQLSN+D+SS+ +VV A KKN  K   GG G EEEVDQKRCQIE+SIW KIEEIFGK+E    +   +SI   + ++ R
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEE-LEEDRNSICRPKKRRSR

Query:  FRSIQSIYMTTKPII-NARFSGNRII
        FRSIQSIYM TKP+I N RFS   ++
Subjt:  FRSIQSIYMTTKPII-NARFSGNRII

KAG6595108.1 hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3572.66Show/hide
Query:  EEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKN-----NNKKRGGGDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKR
        EE SSCSRN EEVL AAQQL+QLSNEDDSSSNVVTAE K        K+ GGGDGG EEEVDQKRCQIE SI SKIEEIFGK++++ EE   SICRP KR
Subjt:  EEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKN-----NNKKRGGGDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKR

Query:  RSRFRSIQSIYMTTKPIINARFSGNRII
          RFRSIQSIYM TKP++NARFSG  I+
Subjt:  RSRFRSIQSIYMTTKPIINARFSGNRII

KAG6604263.1 hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2366.67Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDS-----SSNVVTAEKKNNNKK----RGG--GDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNS
        M E+SS     EEVL AAQ LMQLS EDD      SSNVV A +K  NKK     GG  GDGG EEEVDQKR QIE SIW KIEEIFGK++E  EED NS
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDS-----SSNVVTAEKKNNNKK----RGG--GDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNS

Query:  ICRPKKRRSRFRSIQSIYMTTKPIINARF
        ICRPKKR  RFRS+QSIY+TTKPI N RF
Subjt:  ICRPKKRRSRFRSIQSIYMTTKPIINARF

XP_022133223.1 uncharacterized protein LOC111005872 [Momordica charantia]6.7e-5799.19Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFR
        MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKK NNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFR
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFR

Query:  SIQSIYMTTKPIINARFSGNRII
        SIQSIYMTTKPIINARFSGNRII
Subjt:  SIQSIYMTTKPIINARFSGNRII

XP_031742655.1 uncharacterized protein LOC116404425 [Cucumis sativus]2.5e-2762.12Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGG------EEEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICR
        MEEESS S N EEVLGAAQQLMQLSN+D+SS+ +VV AE K N KK  GGDGG      EEEVDQKRCQIE+S+W KIEEIFGK+ E        +SI  
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGG------EEEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICR

Query:  PKKRRSRFRSIQSIYMTTKPIINARFSGNRII
         + ++ RFRSIQSIYM TKPI N RFS   ++
Subjt:  PKKRRSRFRSIQSIYMTTKPIINARFSGNRII

TrEMBL top hitse value%identityAlignment
A0A067KGF9 Uncharacterized protein1.9e-0954.64Show/hide
Query:  AAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPI
        AAQQLMQLS+ED+S+SN +  EKK+ N K+ G DG  EEE D+   Q E +   KIEEIFGKEEEE    + SI   + R+ R+RS++SIY TTK I
Subjt:  AAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPI

A0A0A0KFU1 Uncharacterized protein1.9e-2062.5Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGG------EEEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICR
        MEEESS S N EEVLGAAQQLMQLSN+D+SS+ +VV AE K N KK  GGDGG      EEEVDQKRCQIE+S+W KIEEIFGK+ E        +SI  
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGG------EEEVDQKRCQIEASIWSKIEEIFGKEEE--ELEEDRNSICR

Query:  PKKRRSRFRSIQ
         + ++ RFRSIQ
Subjt:  PKKRRSRFRSIQ

A0A5A7SLI9 Uncharacterized protein3.5e-2764.29Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEE-LEEDRNSICRPKKRRSR
        MEEESS SRN EEVLGAAQQLMQLSN+D+SS+ +VV A KKN  K   GG G EEEVDQKRCQIE+SIW KIEEIFGK+E    +   +SI   + ++ R
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSS-NVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEE-LEEDRNSICRPKKRRSR

Query:  FRSIQSIYMTTKPII-NARFSGNRII
        FRSIQSIYM TKP+I N RFS   ++
Subjt:  FRSIQSIYMTTKPII-NARFSGNRII

A0A6J1BYI0 uncharacterized protein LOC1110058723.3e-5799.19Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFR
        MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKK NNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFR
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFR

Query:  SIQSIYMTTKPIINARFSGNRII
        SIQSIYMTTKPIINARFSGNRII
Subjt:  SIQSIYMTTKPIINARFSGNRII

A0A6J1GFL5 uncharacterized protein LOC1114537266.9e-2365.89Show/hide
Query:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDS-----SSNVVTAEKKNNNKK----RGG--GDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNS
        M E+SS     EEVL AAQ LMQLS EDD      SSNVV A +K  NKK     GG  GDGG EEEVDQKR QIE SIW KIEEIFGK++E  E+D NS
Subjt:  MEEESSCSRNMEEVLGAAQQLMQLSNEDDS-----SSNVVTAEKKNNNKK----RGG--GDGG-EEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNS

Query:  ICRPKKRRSRFRSIQSIYMTTKPIINARF
        ICRPKKR  RFRS+QSIY+TTKPI N RF
Subjt:  ICRPKKRRSRFRSIQSIYMTTKPIINARF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAATCGTCGTGTTCGCGAAATATGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTCACAGC
GGAGAAGAAGAATAATAATAAGAAGCGCGGCGGCGGCGACGGCGGCGAGGAGGAGGTTGATCAGAAGAGATGCCAAATCGAAGCCTCAATTTGGTCTAAAATTGAAGAGA
TTTTCGGGAAAGAAGAAGAAGAATTAGAAGAAGACCGTAATTCGATTTGTCGGCCCAAGAAGAGACGATCGCGATTTCGATCCATTCAAAGTATTTACATGACCACCAAG
CCCATCATTAATGCAAGATTCTCCGGCAACAGAATCATC
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAATCGTCGTGTTCGCGAAATATGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGTAGCAATGTCGTCACAGC
GGAGAAGAAGAATAATAATAAGAAGCGCGGCGGCGGCGACGGCGGCGAGGAGGAGGTTGATCAGAAGAGATGCCAAATCGAAGCCTCAATTTGGTCTAAAATTGAAGAGA
TTTTCGGGAAAGAAGAAGAAGAATTAGAAGAAGACCGTAATTCGATTTGTCGGCCCAAGAAGAGACGATCGCGATTTCGATCCATTCAAAGTATTTACATGACCACCAAG
CCCATCATTAATGCAAGATTCTCCGGCAACAGAATCATC
Protein sequenceShow/hide protein sequence
MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKNNNKKRGGGDGGEEEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTK
PIINARFSGNRII