; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011320 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011320
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionribonuclease P protein subunit p25-like protein isoform X2
Genome locationscaffold239:965176..968044
RNA-Seq ExpressionMS011320
SyntenyMS011320
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141978.1 ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis sativus]1.0e-13198.04Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFG RGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

XP_008440994.1 PREDICTED: ribonuclease P protein subunit p25-like protein isoform X1 [Cucumis melo]1.7e-13197.65Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATT+LQEKGSNEIVVKGMGRAINKTVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFG RGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

XP_022132370.1 ribonuclease P protein subunit p25-like protein isoform X1 [Momordica charantia]6.8e-136100Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

XP_038881759.1 ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]1.2e-13298.43Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRI GLHQNT+IGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFG RGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

XP_038881760.1 ribonuclease P protein subunit p25-like protein isoform X2 [Benincasa hispida]1.5e-13097.25Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRI GLHQNT+IGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFG RGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGR    GRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHW5 Alba domain-containing protein4.9e-13298.04Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFG RGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

A0A1S3B323 ribonuclease P protein subunit p25-like protein isoform X18.3e-13297.65Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATT+LQEKGSNEIVVKGMGRAINKTVMIAELIKRRI GLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQ PLPVDQVKPWNEFEDEG+GSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFG RGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGF AGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

A0A6J1BSA2 ribonuclease P protein subunit p25-like protein isoform X13.3e-136100Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
        ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRG

Query:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  RGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

A0A6J1HDX9 ribonuclease P protein subunit p25-like protein isoform X18.1e-12795.7Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGAR-GRGRGRGRAFRGR
        ETTRHVSMVSITLSKKELDTSSTGYQ PLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNG SEYQGDGWDGGRGFG R GRGRGRG AFRGR
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGAR-GRGRGRGRAFRGR

Query:  GRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        GRGYGRQSGGYYDYGEP+ P VPGRGF  GRGRGRGRARGRGGYYR DGPVQAAAA
Subjt:  GRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

A0A6J1KS41 uncharacterized protein LOC111496756 isoform X17.3e-12896.48Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGAR-GRGRGRGRAFRGR
        ETTRHVSMVSITLSKKELDTSSTGYQ PLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNG SEYQGDGWDGGRGFG R GRGRGRG AFRGR
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGAR-GRGRGRGRAFRGR

Query:  GRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA
        GRGYGRQSGGYYDYGEPM P VPGRGF  GRGRGRGRARGRGGYYRSDGPVQAAAA
Subjt:  GRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA

SwissProt top hitse value%identityAlignment
Q5PPN2 Ribonuclease P protein subunit p258.9e-1435.9Show/hide
Query:  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLP----------LETTRHVSMVSI
        +R+    ++RN + +AT  + +  +  IV  G GRA  KTV  AE++KRR+AGLHQ T +    + ++W+ L  G  P          L   ++V  ++I
Subjt:  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLP----------LETTRHVSMVSI

Query:  TLSKKELDTSSTGYQPP
         LSK  LD    GYQPP
Subjt:  TLSKKELDTSSTGYQPP

Q8N5L8 Ribonuclease P protein subunit p25-like protein6.8e-1438.26Show/hide
Query:  PINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSITL
        P +  E+R+    ++RN +  A   L+   +  +V  G GRA  K V  AE++KRR+ GLHQ T +      D W P   + GL PL   RHV  V + L
Subjt:  PINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPL--EEGLLPLETTRHVSMVSITL

Query:  SKKELDTSSTGYQPP
        S+  LD +  GYQPP
Subjt:  SKKELDTSSTGYQPP

Q91WE3 Ribonuclease P protein subunit p258.9e-1435.9Show/hide
Query:  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLP----------LETTRHVSMVSI
        +R+    ++RN + +AT  + +  +  IV  G GRA  KTV  AE++KRR+AGLHQ T +    + ++W+ L  G  P          L   ++V  ++I
Subjt:  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLP----------LETTRHVSMVSI

Query:  TLSKKELDTSSTGYQPP
         LSK  LD    GYQPP
Subjt:  TLSKKELDTSSTGYQPP

Q99JH1 Ribonuclease P protein subunit p25-like protein6.2e-1538.24Show/hide
Query:  MDRYQR---VEKPKSE---NTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPL-
        M++Y+R   VE P S      P +  E+R+    ++RN +  A   L+   +  +V  G GRA  K V  AE++KRR+ GLHQ T +      D W P  
Subjt:  MDRYQR---VEKPKSE---NTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPL-

Query:  -EEGLLPLETTRHVSMVSITLSKKELDTSSTGYQPP
         + GL PL   RHV  V + LS+  LD S  GYQPP
Subjt:  -EEGLLPLETTRHVSMVSITLSKKELDTSSTGYQPP

Q9BUL9 Ribonuclease P protein subunit p252.6e-1335.29Show/hide
Query:  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEG----------LLPLETTRHVSMVSI
        +R+    ++RN + +AT  + +  +  IV  G GRA  KTV  AE++KRR+AGLHQ T +    + ++W+ L  G             L   ++V  ++I
Subjt:  IRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEG----------LLPLETTRHVSMVSI

Query:  TLSKKELDTSSTGYQPPLP
         LSK  LD    GYQPP P
Subjt:  TLSKKELDTSSTGYQPPLP

Arabidopsis top hitse value%identityAlignment
AT1G20220.1 Alba DNA/RNA-binding protein1.1e-6261.72Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MD+YQRVEKPK++ TPI ENEIRIT+ GR RNYITYA  LLQE  SNE++ K MGRAINK+V I ELIKRRI GLHQ T+IGSTDITD WEP EEGL  +
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEG-EGSPRIRG--RGR-GRGRGRGRGNY-NGPSEYQGDGWDGGRGFGARGRG------
        ETTRHVSM++ITLSK++L+TSS GYQ P+P++ VKP  E + EG +GSPR RG  RGR GRGRGRGRG   NGP+  + D  DGGRG G RG G      
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEG-EGSPRIRG--RGR-GRGRGRGRGNY-NGPSEYQGDGWDGGRGFGARGRG------

Query:  --RGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGY
           GRGR   GRG GY       Y+ G        GRG   GRG GRG  RGRGGY
Subjt:  --RGRGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRGRARGRGGY

AT1G31290.1 ARGONAUTE 33.8e-0446.15Show/hide
Query:  GRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRG------RGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRG-RARGRGGYY
        GRGRG G  RGRG Y+G  + +G G DG RG+  RG G G      RGR + GRG G GR  GG  D G   +    G G   G  RGRG   RGRG   
Subjt:  GRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRG------RGRAFRGRGRGYGRQSGGYYDYGEPMAPPVPGRGFAAGRGRGRG-RARGRGGYY

Query:  RSDG
          DG
Subjt:  RSDG

AT1G76010.1 Alba DNA/RNA-binding protein1.9e-6757.99Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MD+YQRV KPK++ TPI+ NEIRIT+QGR RNYITYA TLLQ+KGS E+V K MGRAINKTV I ELIKRRI  LHQNT+IGSTDITD WEP EEGLLPL
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEG-EGSPRIRGRGRGRGRGR-----GRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGR
        ETTRHVSM++ITLSK EL+TSS GYQ P+P++ VKP  + + EG EGSP  RGRGRGRGRGR     GRGN     E++  GW+  + +G RGRGRGRGR
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEG-EGSPRIRGRGRGRGRGR-----GRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGR

Query:  AFRGRGR----------------GYG----RQSGGYYDYGEPMAPPVPGRGFAAGRGRG-----------RGRARGRGGYYRSDGPVQ
        + RGRGR                GYG     +  GY D G   APP    G+   +GRG            G  +GRGGY   DGP Q
Subjt:  AFRGRGR----------------GYG----RQSGGYYDYGEPMAPPVPGRGFAAGRGRG-----------RGRARGRGGYYRSDGPVQ

AT3G07030.1 Alba DNA/RNA-binding protein2.2e-3944.16Show/hide
Query:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL
        MDRYQRV KPK E +PINENEIRIT++G +RNYI+YAT+LLQEK   +IV+K MG+AI+KTV I+E++K +I GLHQ+ AI S  ITD+WEP EEGL P+
Subjt:  MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPL

Query:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVK-------------PWNEFEDEGE-----------GSPRIRGRGRGRGRGR---------------
        E TRHVSM+SITLS  EL+  S GYQ P   DQ K             P+N + +EGE                +G  + + +G                
Subjt:  ETTRHVSMVSITLSKKELDTSSTGYQPPLPVDQVK-------------PWNEFEDEGE-----------GSPRIRGRGRGRGRGR---------------

Query:  ---------------GRGNYNGPSEYQGDGWDGGR--GFGAR---GRGRGRG-RAFRGRGRGYGRQSGGYYD-YGEPMAPPVPGR--GFAAGRGRGR--G
                       GRG Y G  +    G+ GGR  G+G R   G G  R  R   GR  GYG   GG  D YG        GR  GF  GRG GR  G
Subjt:  ---------------GRGNYNGPSEYQGDGWDGGR--GFGAR---GRGRGRG-RAFRGRGRGYGRQSGGYYD-YGEPMAPPVPGR--GFAAGRGRGR--G

Query:  RARGRGGY
           GRGGY
Subjt:  RARGRGGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGGTACCAGAGAGTGGAGAAGCCCAAGTCAGAGAATACTCCTATAAACGAGAATGAGATTCGCATTACTACCCAAGGAAGGATGAGGAACTACATTACTTATGC
CACCACTCTTCTCCAGGAGAAAGGGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATCAATAAGACTGTAATGATAGCTGAACTAATTAAGAGAAGGATTGCTG
GTCTCCATCAGAACACTGCAATTGGATCCACTGATATAACTGACATGTGGGAGCCACTCGAAGAAGGCCTTCTTCCTCTAGAGACTACTCGACATGTTTCTATGGTGTCA
ATTACCTTGTCCAAGAAGGAGCTAGATACATCTTCGACAGGATACCAGCCTCCGCTTCCAGTTGACCAAGTGAAACCATGGAATGAATTTGAAGATGAAGGAGAGGGATC
ACCTAGGATACGAGGCAGGGGACGTGGTAGGGGTAGAGGCAGGGGTAGAGGGAACTACAATGGTCCATCTGAGTATCAGGGAGATGGATGGGATGGTGGGCGAGGTTTTG
GTGCTAGAGGTCGAGGACGTGGAAGAGGTCGTGCATTTCGTGGAAGGGGACGTGGTTATGGTCGTCAATCAGGTGGATATTATGATTATGGTGAACCTATGGCACCACCA
GTCCCTGGCCGAGGCTTTGCAGCGGGGCGTGGTCGTGGCAGGGGGAGGGCTCGTGGTCGTGGTGGTTATTATCGATCAGATGGACCGGTGCAAGCAGCCGCTGCT
mRNA sequenceShow/hide mRNA sequence
ATGGATAGGTACCAGAGAGTGGAGAAGCCCAAGTCAGAGAATACTCCTATAAACGAGAATGAGATTCGCATTACTACCCAAGGAAGGATGAGGAACTACATTACTTATGC
CACCACTCTTCTCCAGGAGAAAGGGTCAAACGAGATTGTTGTCAAGGGAATGGGCAGAGCTATCAATAAGACTGTAATGATAGCTGAACTAATTAAGAGAAGGATTGCTG
GTCTCCATCAGAACACTGCAATTGGATCCACTGATATAACTGACATGTGGGAGCCACTCGAAGAAGGCCTTCTTCCTCTAGAGACTACTCGACATGTTTCTATGGTGTCA
ATTACCTTGTCCAAGAAGGAGCTAGATACATCTTCGACAGGATACCAGCCTCCGCTTCCAGTTGACCAAGTGAAACCATGGAATGAATTTGAAGATGAAGGAGAGGGATC
ACCTAGGATACGAGGCAGGGGACGTGGTAGGGGTAGAGGCAGGGGTAGAGGGAACTACAATGGTCCATCTGAGTATCAGGGAGATGGATGGGATGGTGGGCGAGGTTTTG
GTGCTAGAGGTCGAGGACGTGGAAGAGGTCGTGCATTTCGTGGAAGGGGACGTGGTTATGGTCGTCAATCAGGTGGATATTATGATTATGGTGAACCTATGGCACCACCA
GTCCCTGGCCGAGGCTTTGCAGCGGGGCGTGGTCGTGGCAGGGGGAGGGCTCGTGGTCGTGGTGGTTATTATCGATCAGATGGACCGGTGCAAGCAGCCGCTGCT
Protein sequenceShow/hide protein sequence
MDRYQRVEKPKSENTPINENEIRITTQGRMRNYITYATTLLQEKGSNEIVVKGMGRAINKTVMIAELIKRRIAGLHQNTAIGSTDITDMWEPLEEGLLPLETTRHVSMVS
ITLSKKELDTSSTGYQPPLPVDQVKPWNEFEDEGEGSPRIRGRGRGRGRGRGRGNYNGPSEYQGDGWDGGRGFGARGRGRGRGRAFRGRGRGYGRQSGGYYDYGEPMAPP
VPGRGFAAGRGRGRGRARGRGGYYRSDGPVQAAAA