; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011330 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011330
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationscaffold239:1063630..1063872
RNA-Seq ExpressionMS011330
SyntenyMS011330
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64856.1 hypothetical protein VITISV_030491 [Vitis vinifera]2.1e-1964.77Show/hide
Query:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKED----GDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M++S+SF     SYS+ R GFE R  SYSFNG I K D     DNPE+KRR+RVA+YN YSMEGKLK SLRNSFKWIKNKF+  +YDD
Subjt:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKED----GDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

KAE8647476.1 hypothetical protein Csa_003778 [Cucumis sativus]5.6e-2882.35Show/hide
Query:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M+RSKS  GSYS    +VRFGFED PKSYSFNGTI KED  N ELKRRQRVATYN YSMEGKLKKSLRNSFKWIKNK SHSFYDD
Subjt:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

KAF8012030.1 hypothetical protein BT93_I0224 [Corymbia citriodora subsp. variegata]7.4e-2068.24Show/hide
Query:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKEDG----DNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSF
        M++SKSF G   SYS +R GFEDR KSYSFNG  N  DG     NPELKRR+RVA+YN Y+MEGKLK SLRNSFKWIK+KFS  F
Subjt:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKEDG----DNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSF

PRQ49076.1 hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]4.3e-2059.57Show/hide
Query:  MDRSKSFCG----SYSNVRFGFEDRPKSYSFNGTINKEDG---------DNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M++SKSF G    +Y+  RFGFEDRPKSYSFNG ++K +G          NPEL+RR+RVA YN Y+MEGK K SLRNSFKWIK KF  +FYD+
Subjt:  MDRSKSFCG----SYSNVRFGFEDRPKSYSFNGTINKEDG---------DNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

TYK12983.1 hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]6.9e-2678.57Show/hide
Query:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYD
        M+RSKS  GSYS    +VRFGFED PKSYSF+GT+ KED  N ELKRRQRVATYN YSMEGKLKKSLRNSFKWIKNK SHSFY+
Subjt:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYD

TrEMBL top hitse value%identityAlignment
A0A0A0KFC2 Uncharacterized protein2.7e-2882.35Show/hide
Query:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M+RSKS  GSYS    +VRFGFED PKSYSFNGTI KED  N ELKRRQRVATYN YSMEGKLKKSLRNSFKWIKNK SHSFYDD
Subjt:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A2P6RRL4 Uncharacterized protein2.1e-2059.57Show/hide
Query:  MDRSKSFCG----SYSNVRFGFEDRPKSYSFNGTINKEDG---------DNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M++SKSF G    +Y+  RFGFEDRPKSYSFNG ++K +G          NPEL+RR+RVA YN Y+MEGK K SLRNSFKWIK KF  +FYD+
Subjt:  MDRSKSFCG----SYSNVRFGFEDRPKSYSFNGTINKEDG---------DNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A438F5V3 Uncharacterized protein1.0e-1964.77Show/hide
Query:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKED----GDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M++S+SF     SYS+ R GFE R  SYSFNG I K D     DNPE+KRR+RVA+YN YSMEGKLK SLRNSFKWIKNKF+  +YDD
Subjt:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKED----GDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

A0A5D3CM35 Uncharacterized protein3.3e-2678.57Show/hide
Query:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYD
        M+RSKS  GSYS    +VRFGFED PKSYSF+GT+ KED  N ELKRRQRVATYN YSMEGKLKKSLRNSFKWIKNK SHSFY+
Subjt:  MDRSKSFCGSYS----NVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYD

F6H4C1 Uncharacterized protein1.0e-1964.77Show/hide
Query:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKED----GDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD
        M++S+SF     SYS+ R GFE R  SYSFNG I K D     DNPE+KRR+RVA+YN YSMEGKLK SLRNSFKWIKNKF+  +YDD
Subjt:  MDRSKSFCG---SYSNVRFGFEDRPKSYSFNGTINKED----GDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)2.9e-0658.33Show/hide
Query:  NPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNK
        +P+L+R++RV +Y  Y++EGKLK S R SFKWIK+K
Subjt:  NPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNK

AT3G05725.1 Protein of unknown function (DUF3511)1.5e-0750.98Show/hide
Query:  RPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIK
        RP+  S + T+ K   ++PE+KR++RVA Y  YS EGK+K +LR S+KWIK
Subjt:  RPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIK

AT3G62640.1 Protein of unknown function (DUF3511)5.0e-0648.65Show/hide
Query:  ELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSH
        E KR++R+ATY  Y++EGK+K +++  F WIK+++SH
Subjt:  ELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSH

AT4G09890.1 Protein of unknown function (DUF3511)2.1e-1250.63Show/hide
Query:  MDRSKS---FCGSYSNVRFGF-EDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFS
        M  SKS   +  S+S   FG+ ++R  SY+FNG     D   PE+KR++RVA+YN ++ E KLK +L+NSFKWIKNKFS
Subjt:  MDRSKS---FCGSYSNVRFGF-EDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFS

AT5G11970.1 Protein of unknown function (DUF3511)4.5e-0750Show/hide
Query:  NPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFY
        +PEL+R++RVA+Y  Y +EGK+K S RNSF+W+K +++   Y
Subjt:  NPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAAGCAAATCATTCTGTGGGTCTTACTCAAATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGCACAATCAACAAGGAAGATGGGGA
CAATCCAGAGCTCAAGAGGAGGCAAAGAGTAGCCACTTACAATAGGTATTCAATGGAAGGTAAGCTGAAGAAATCCTTGAGGAACAGCTTCAAGTGGATCAAGAACAAGT
TTTCCCACAGCTTTTATGATGAC
mRNA sequenceShow/hide mRNA sequence
ATGGACAGAAGCAAATCATTCTGTGGGTCTTACTCAAATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGCACAATCAACAAGGAAGATGGGGA
CAATCCAGAGCTCAAGAGGAGGCAAAGAGTAGCCACTTACAATAGGTATTCAATGGAAGGTAAGCTGAAGAAATCCTTGAGGAACAGCTTCAAGTGGATCAAGAACAAGT
TTTCCCACAGCTTTTATGATGAC
Protein sequenceShow/hide protein sequence
MDRSKSFCGSYSNVRFGFEDRPKSYSFNGTINKEDGDNPELKRRQRVATYNRYSMEGKLKKSLRNSFKWIKNKFSHSFYDD