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MS011343 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011343
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncopper ion binding;cobalt ion binding;zinc ion binding
Genome locationscaffold239:1188956..1189315
RNA-Seq ExpressionMS011343
SyntenyMS011343
Gene Ontology termsGO:0009555 - pollen development (biological process)
InterPro domainsIPR031432 - MALE GAMETOPHYTE DEFECTIVE 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027107.1 putative ATP synthase 24 kDa subunit, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        ++GIRREDLPKYEEQLELKISKAQLE+LKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
XP_008440128.1 PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis melo]6.7e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQLEE+KKDALEAMETQKKREEFKD+EMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
XP_022132532.1 probable ATP synthase 24 kDa subunit, mitochondrial [Momordica charantia]3.9e-2196.77Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQL+ELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
XP_022963251.1 probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita moschata]6.7e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        ++GIRREDLPKYEEQLELKISKAQLE+LKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
XP_038881119.1 probable ATP synthase 24 kDa subunit, mitochondrial [Benincasa hispida]1.8e-2198.39Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
TrEMBL top hitse value%identityAlignment
A0A0A0KKY9 Uncharacterized protein3.2e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQLEE+KKDALEAMETQKKREEFKD+EMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
A0A1S3B0D0 probable ATP synthase 24 kDa subunit, mitochondrial3.2e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQLEE+KKDALEAMETQKKREEFKD+EMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
A0A5D3CNN3 Putative ATP synthase 24 kDa subunit3.2e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQLEE+KKDALEAMETQKKREEFKD+EMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
A0A6J1BU34 probable ATP synthase 24 kDa subunit, mitochondrial1.9e-2196.77Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIRREDLPKYEEQLELKISKAQL+ELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
A0A6J1HFN0 probable ATP synthase 24 kDa subunit, mitochondrial3.2e-2195.16Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        ++GIRREDLPKYEEQLELKISKAQLE+LKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
SwissProt top hitse value%identityAlignment
Q9SJ12 Probable ATP synthase 24 kDa subunit, mitochondrial5.5e-1874.19Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIR+EDLPKYEE LEL ++KAQL+ELK DA+EAME+QKK+EEF+DEEM D KSLD+RNF+
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
Arabidopsis top hitse value%identityAlignment
AT2G21870.1 copper ion binding;cobalt ion binding;zinc ion binding3.9e-1974.19Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
        +LGIR+EDLPKYEE LEL ++KAQL+ELK DA+EAME+QKK+EEF+DEEM D KSLD+RNF+
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL
AT2G21870.2 copper ion binding;cobalt ion binding;zinc ion binding3.3e-1073.81Show/hide
Query:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKR
        +LGIR+EDLPKYEE LEL ++KAQL+ELK DA+EAME+QKK+
Subjt:  RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCTTGGCATTCGGAGGGAAGATCTGCCCAAGTACGAGGAGCAGTTGGAACTTAAAATTTCCAAGGCACAATTGGAAGAGCTGAAGAAAGATGCTCTTGAGGCAATGGA
AACTCAAAAGAAGCGTGAGGAGTTTAAAGACGAGGAAATGGTGGATACGAAGTCTTTAGACGTGAGAAACTTCCTG
mRNA sequenceShow/hide mRNA sequence
AGGCTTGGCATTCGGAGGGAAGATCTGCCCAAGTACGAGGAGCAGTTGGAACTTAAAATTTCCAAGGCACAATTGGAAGAGCTGAAGAAAGATGCTCTTGAGGCAATGGA
AACTCAAAAGAAGCGTGAGGAGTTTAAAGACGAGGAAATGGTGGATACGAAGTCTTTAGACGTGAGAAACTTCCTG
Protein sequenceShow/hide protein sequence
RLGIRREDLPKYEEQLELKISKAQLEELKKDALEAMETQKKREEFKDEEMVDTKSLDVRNFL