; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011356 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011356
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationscaffold239:1274918..1275121
RNA-Seq ExpressionMS011356
SyntenyMS011356
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027104.1 hypothetical protein SDJN02_11115 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2894.12Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA AAPPT TDSFPTE
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
XP_022133052.1 uncharacterized protein LOC111005740 isoform X1 [Momordica charantia]6.6e-3098.53Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPTVTDSFPTE
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
XP_022133053.1 uncharacterized protein LOC111005740 isoform X2 [Momordica charantia]6.6e-3098.53Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPTVTDSFPTE
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]2.1e-2894.12Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPT TDSFPT+
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
XP_023517234.1 uncharacterized protein LOC111781060 [Cucurbita pepo subsp. pepo]3.6e-2894.12Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIA AAPPT TDSFPTE
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
TrEMBL top hitse value%identityAlignment
A0A1S3B006 uncharacterized protein LOC103484698 isoform X13.0e-2892.65Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPT TDSFPT+
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
A0A5D3CRJ2 Defence response isoform 13.0e-2892.65Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPT TDSFPT+
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
A0A6J1BVJ2 uncharacterized protein LOC111005740 isoform X13.2e-3098.53Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPTVTDSFPTE
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X23.2e-3098.53Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASA PPTVTDSFPTE
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
A0A6J1IJV1 uncharacterized protein LOC1114780921.0e-2894.12Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
        KTAPWLSVPQFGDWDQKG +PDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPT TDSFPT+
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown3.9e-2069.57Show/hide
Query:  KTAPWLSVPQFGDWDQK--GPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPT
        K  PWLSVPQFGDWDQK  G +PDYS+DF+KIRE RKQNKRD SRASLGNEEELI      T T    T
Subjt:  KTAPWLSVPQFGDWDQK--GPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPT
AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein6.6e-1257.89Show/hide
Query:  KTAPWLSVPQFGDWDQKGP--LPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS
        + A W  VPQFG WDQKGP    +YS+ FSK R NRKQNK  V  +SLG+E+EL+ S
Subjt:  KTAPWLSVPQFGDWDQKGP--LPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIAS
AT5G64850.1 FUNCTIONS IN: molecular_function unknown1.1e-1983.02Show/hide
Query:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI
        K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI
Subjt:  KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACCGCTGCCGGACTACTCCCTTGATTTTTCTAAAATTAGGGAAAATAGGAAACAGAA
CAAGAGAGATGTGTCTAGGGCGAGTCTCGGAAATGAAGAGGAGCTCATTGCCTCAGCCGCGCCCCCAACTGTAACAGACTCTTTTCCTACTGAA
mRNA sequenceShow/hide mRNA sequence
AAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACCGCTGCCGGACTACTCCCTTGATTTTTCTAAAATTAGGGAAAATAGGAAACAGAA
CAAGAGAGATGTGTCTAGGGCGAGTCTCGGAAATGAAGAGGAGCTCATTGCCTCAGCCGCGCCCCCAACTGTAACAGACTCTTTTCCTACTGAA
Protein sequenceShow/hide protein sequence
KTAPWLSVPQFGDWDQKGPLPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTVTDSFPTE