CuGenDBv2

Gene ID	MS011375
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transmembrane protein 220
Genome location	scaffold239:1410765..1411566
RNA-Seq Expression	MS011375
Synteny	MS011375
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029377 - TMEM220 protein

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6595075.1 hypothetical protein SDJN03_11628, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-64

78.18

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQFNDPDWYLW+PLYGCACAVNL NW +S E + YVAKATLGLGI LWVKVVAED+VNGIAGF+SLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV++SM+L L+AES S    RT K  R F RY+  GMA+LVAFSYGLP+FFFL+Q G+M F
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

XP_004141949.1 transmembrane protein 220 isoform X2 [Cucumis sativus]

7.6e-64

77.98

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYSSCS+LM FLFAYSTAVQFNDPDWYLWVPLYGCACAVNL  W +S E +  VAKA +G+GI LWVKVVAEDY+NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMIL-VLMAESPSPKLHRT--SKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV+ SMIL ++ A S SPKL RT  SKS R FPR+L  G+A LVAFSYGLP+FFFLV+KG+MKF
Subjt:  TGSGLVMASMIL-VLMAESPSPKLHRT--SKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

XP_022133255.1 transmembrane protein 220 [Momordica charantia]

3.8e-87

99.39

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKG+MKF
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

XP_023517546.1 uncharacterized protein LOC111781274 [Cucurbita pepo subsp. pepo]

3.4e-64

78.79

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQFNDPDWYLW+PLYGCACAVNL NW +S + + YVAKATLGLGI LWVKVVAED+VNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV++SM+L L+AES S    RT K  R F RY+  GMA+LVAFSYGLP+FFFLVQ G+M F
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

XP_038881310.1 transmembrane protein 220 isoform X2 [Benincasa hispida]

9.0e-65

78.7

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLM FLFAYSTAVQFNDPDWYLWVPLYGCACAVNL  W +S E + +VAKAT+G GI LWVKVVAEDY+NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMA----ESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV+ SMIL L+A     S S ++HRTSKS R FPRYL  GMA LVAFSYGLP+ FFLVQKG+MKF
Subjt:  TGSGLVMASMILVLMA----ESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KI28 Uncharacterized protein

3.7e-64

77.98

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYSSCS+LM FLFAYSTAVQFNDPDWYLWVPLYGCACAVNL  W +S E +  VAKA +G+GI LWVKVVAEDY+NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMIL-VLMAESPSPKLHRT--SKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV+ SMIL ++ A S SPKL RT  SKS R FPR+L  G+A LVAFSYGLP+FFFLV+KG+MKF
Subjt:  TGSGLVMASMIL-VLMAESPSPKLHRT--SKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

A0A5D3CNK6 Transmembrane protein 220

4.8e-64

77.71

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MA PSKLYSSCS+LM FLFAYSTAVQFNDPDWYLWVPLYGCACAVNL  W +S E +  VAKA +G+GI LWVKVVAEDY+NGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMIL-VLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV+ SMIL ++ A S SPKL  TSKS R FPR+L  G+A LVAFSYGLP+FFFLV+KG+MKF
Subjt:  TGSGLVMASMIL-VLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

A0A6J1BUR8 transmembrane protein 220

1.8e-87

99.39

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKG+MKF
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

A0A6J1HG20 uncharacterized protein LOC111463236

3.7e-64

77.58

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQFNDPDWYLW+PLYGCACAVNL NW +S + + Y+AKATLGLGI LWVKVVAED+VNGIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV++SM+L L+AES S    RT K  R F RY+  GMA+LVAFSYGLP+FFFL+Q G+M F
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

A0A6J1KP55 uncharacterized protein LOC111497019

4.8e-64

78.79

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MATPSKLYS CSLLMAFLFAYSTAVQFNDPDWYLW+PLYGCACAVNL NW +S E + YVAKATLGLGI LWVKVVAED+V+GIAGFLSLDLSERVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF
        TGSGLV++SM+L L+AES S    RT K  R F RY+  GMA+LVAFSYGLP+FFFLVQ G+M F
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G23755.1 unknown protein

2.9e-37

51.22

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Query:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK
        MA P  L+  CSLLMAFLFAYS +VQ NDPDWY W PLY  AC VNL N+    + +  + +  L LG++L VKV+AED +    G LSLDL+ RVVREK
Subjt:  MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREK

Query:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMK
         GSGLV+ASM+L L A S S K              +  GM   V F YGLP +FF ++KGE+K
Subjt:  TGSGLVMASMILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMK

Sequences

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CDS sequence

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ATGGCAACACCTTCCAAATTATACAGCAGCTGCTCTCTGTTAATGGCGTTTCTGTTTGCTTATTCCACAGCTGTTCAGTTTAACGATCCTGATTGGTATTTGTGGGTTCC
ACTTTATGGCTGTGCTTGTGCTGTGAATCTTCCCAACTGGGTTATCTCCTCAGAAACCATAGGTTATGTTGCCAAGGCTACACTGGGACTTGGAATTTATTTGTGGGTAA
AAGTGGTAGCAGAGGATTATGTGAATGGAATTGCAGGGTTTCTCTCTCTAGATTTAAGTGAGAGAGTGGTGAGGGAGAAAACAGGAAGTGGATTGGTTATGGCTTCCATG
ATTTTAGTGCTAATGGCAGAATCACCATCCCCAAAACTTCACAGAACATCAAAAAGTTTAAGGCCCTTTCCAAGATATCTCCCATGTGGAATGGCAACGTTGGTGGCATT
TAGTTATGGGCTTCCCGTTTTCTTCTTCTTGGTTCAGAAGGGGGAAATGAAATTC

mRNA sequence

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Protein sequence

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MATPSKLYSSCSLLMAFLFAYSTAVQFNDPDWYLWVPLYGCACAVNLPNWVISSETIGYVAKATLGLGIYLWVKVVAEDYVNGIAGFLSLDLSERVVREKTGSGLVMASM
ILVLMAESPSPKLHRTSKSLRPFPRYLPCGMATLVAFSYGLPVFFFLVQKGEMKF

MS011375 (gene) of Bitter gourd (TR) v1 genome