; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS011378 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011378
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationscaffold239:1442613..1443077
RNA-Seq ExpressionMS011378
SyntenyMS011378
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141948.1 uncharacterized protein LOC101203564 [Cucumis sativus]1.0e-7091.61Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSESTA+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+DDEELQLGQLYFALPL+RLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKC GG+KCGHRRRSVSP V TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

XP_008440178.1 PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]1.5e-6989.68Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+DDEELQ+GQLYFALPL+RL+QPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKC GG+KCGHRRRSVSP V TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

XP_022963140.1 uncharacterized protein LOC111463438 [Cucurbita moschata]8.2e-6888.39Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSESTA+ATAKLIL+DG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+D+EELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKCG G+KC HRRRSVSP V TVEELKTR+R++AG R GAGGRKKFAANL+AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

XP_023518464.1 uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]4.8e-6889.03Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSESTA+ATAKLIL+DG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AISDDEELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKCG G+KC HRRRSVSP V TVEELKTR+R++AG R GAGGR KFAANL+AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

XP_038883003.1 uncharacterized protein LOC120074082 [Benincasa hispida]1.5e-6990.32Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQ NPSCFICNSDEMDFDDAL+AISDDEELQLGQLYFALPL+RLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKCGGG+KC HRRRSVSP V TVEELKTR+RVAAG RGGAGGR+KFAANL AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KJB4 Uncharacterized protein5.0e-7191.61Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSESTA+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+DDEELQLGQLYFALPL+RLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKC GG+KCGHRRRSVSP V TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

A0A1S3B0H3 uncharacterized protein LOC1034847217.2e-7089.68Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+DDEELQ+GQLYFALPL+RL+QPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKC GG+KCGHRRRSVSP V TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

A0A5D3CRH4 HTH-type transcriptional regulator protein ptxE7.2e-7089.68Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSES A+ATAKLILHDG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+DDEELQ+GQLYFALPL+RL+QPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKC GG+KCGHRRRSVSP V TVEELKTR+RVAAG RGGAGGRKKFAANL AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

A0A6J1HH54 uncharacterized protein LOC1114634384.0e-6888.39Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSESTA+ATAKLIL+DG+LQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDAL+AI+D+EELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKCG G+KC HRRRSVSP V TVEELKTR+R++AG R GAGGRKKFAANL+AIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

A0A6J1KPP1 uncharacterized protein LOC1114971504.0e-6887.74Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSESTA+ATAKLIL+DGTLQEFSYPVKVSY+LQKNPSCFICNSDEMDFDDAL+AISD+EELQLGQLYFALPLSRLKQPLQ EEMAALAVKANSAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
        MKCG G+KC HRRRSVSP V  +EELKTR+R++AG R GAGGR KFAANLTAIPE
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein9.1e-1735.95Show/hide
Query:  MGICSSSES----TALATAKLILHDGTLQEFSYPVKVSYVLQ----------KNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQP
        MG+C S       ++  TAK++  +G L+E+  PV  S VL+           + S F+CNSD + +DD + AI  DE LQ  Q+YF LP+S+ +  L  
Subjt:  MGICSSSES----TALATAKLILHDGTLQEFSYPVKVSYVLQ----------KNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQP

Query:  EEMAALAVKANSALMKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGG
         +MAALAVKA+ A+ K  G +    R   +SP V   +    R      R GG
Subjt:  EEMAALAVKANSALMKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGG

AT2G23690.1 unknown protein2.7e-4560.12Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSS EST +ATAKLILHDG + EF+ PVKV YVLQKNP CFICNSD+MDFD+ ++AIS DEE QLGQLYFALPLS L   L+ EEMAALAVKA+SAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGG---EKCGHRRRSVSPAVLTVEELKT-----RERVAAGRRGGAGGRKKFAANLTAIPE
        M+ GG    +KC  RR+ VSP + +   +         R    R GG  GR+K+AA L+ I E
Subjt:  MKCGGG---EKCGHRRRSVSPAVLTVEELKT-----RERVAAGRRGGAGGRKKFAANLTAIPE

AT3G50800.1 unknown protein2.0e-3553.55Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MG C+S ES    TAKLIL DGTLQEFS PVKV  +LQKNP+ F+CNSD+MDFDDA+ A+   E+L+ G+LYF LPL+ L  PL+ +EMAALAVKA+SAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
         K GGG   G            V  +K       G  GG  GR+KF A L++I E
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE

AT4G37240.1 unknown protein2.2e-4259.43Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MGICSSSEST +ATAKLIL DG + EF+ PVKV YVL K P CFICNSD+MDFDDA+AAIS DEELQLGQ+YFALPL  L+QPL+ EEMAALAVKA+SAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAG-------------RRGGAGG-------RKKFAANLTAIPE
        M+ GGG   G RR+ V P V      K R RV +G             R G  GG       RK +AA L+ I E
Subjt:  MKCGGGEKCGHRRRSVSPAVLTVEELKTRERVAAG-------------RRGGAGG-------RKKFAANLTAIPE

AT5G66580.1 unknown protein8.8e-3653.85Show/hide
Query:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL
        MG C+S ES    +AKLIL DGTLQEFS PVKV  +LQKNP+ F+CNSDEMDFDDA++A++ +EEL+ GQLYF LPL+ L  PL+ EEMAALAVKA+SAL
Subjt:  MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSAL

Query:  MKCGG-GEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE
         K GG G   G    + S      + +   +    G RG   G+++F ANL+ I E
Subjt:  MKCGG-GEKCGHRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCAGTTCATCGGAATCCACCGCCCTCGCCACCGCCAAACTGATCCTCCACGATGGAACTCTGCAGGAGTTTTCGTACCCAGTCAAGGTTTCGTACGTCCT
TCAAAAGAATCCGTCGTGCTTCATCTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGGCCGCCATTAGTGACGACGAAGAGCTTCAACTCGGTCAACTCTATTTCG
CGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGCCGGAGGAAATGGCGGCATTGGCCGTTAAGGCCAACTCTGCGCTCATGAAATGCGGCGGCGGAGAGAAATGCGGC
CACCGCCGGAGATCAGTGTCTCCGGCGGTTTTAACCGTCGAGGAACTGAAGACTCGCGAGCGAGTGGCTGCCGGCCGTCGCGGCGGCGCCGGTGGAAGAAAAAAGTTCGC
GGCGAATTTGACGGCGATTCCCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCAGTTCATCGGAATCCACCGCCCTCGCCACCGCCAAACTGATCCTCCACGATGGAACTCTGCAGGAGTTTTCGTACCCAGTCAAGGTTTCGTACGTCCT
TCAAAAGAATCCGTCGTGCTTCATCTGCAACTCCGACGAGATGGATTTCGACGACGCCTTGGCCGCCATTAGTGACGACGAAGAGCTTCAACTCGGTCAACTCTATTTCG
CGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGCCGGAGGAAATGGCGGCATTGGCCGTTAAGGCCAACTCTGCGCTCATGAAATGCGGCGGCGGAGAGAAATGCGGC
CACCGCCGGAGATCAGTGTCTCCGGCGGTTTTAACCGTCGAGGAACTGAAGACTCGCGAGCGAGTGGCTGCCGGCCGTCGCGGCGGCGCCGGTGGAAGAAAAAAGTTCGC
GGCGAATTTGACGGCGATTCCCGAG
Protein sequenceShow/hide protein sequence
MGICSSSESTALATAKLILHDGTLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALAAISDDEELQLGQLYFALPLSRLKQPLQPEEMAALAVKANSALMKCGGGEKCG
HRRRSVSPAVLTVEELKTRERVAAGRRGGAGGRKKFAANLTAIPE