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MS011407 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011407
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAutophagy-related protein 101
Genome locationscaffold239:1649210..1649311
RNA-Seq ExpressionMS011407
SyntenyMS011407
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0000407 - phagophore assembly site (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604199.1 Autophagy-related protein 101, partial [Cucurbita argyrosperma subsp. sororia]4.1e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
KAG8474673.1 hypothetical protein CXB51_031134 [Gossypium anomalum]4.8e-0581.25Show/hide
Query:  NGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        N +LP++SSSDSAFGMDMIKRML +GHPTMLS
Subjt:  NGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
XP_022949787.1 autophagy-related protein 101 [Cucurbita moschata]4.1e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
XP_038883670.1 autophagy-related protein 101 isoform X1 [Benincasa hispida]4.1e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
XP_038883671.1 autophagy-related protein 101 isoform X2 [Benincasa hispida]4.1e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
TrEMBL top hitse value%identityAlignment
A0A0A0KJH5 Autophagy-related protein 1012.0e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
A0A1S3B1D8 Autophagy-related protein 1012.0e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
A0A6J1GD29 Autophagy-related protein 1012.0e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
A0A6J1IMY4 Autophagy-related protein 1012.0e-0479.41Show/hide
Query:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
        IF   + + SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS
A0A6J5VIM4 Autophagy-related protein 1012.6e-04100Show/hide
Query:  SSSDSAFGMDMIKRMLQTGHPTMLS
        SSSDSAFGMDMIKRMLQTGHPTMLS
Subjt:  SSSDSAFGMDMIKRMLQTGHPTMLS
SwissProt top hitse value%identityAlignment
F4K265 Autophagy-related protein 1015.5e-0479.17Show/hide
Query:  SSSDSAFGMDMIKRMLQTGHPTML
        SSSDSAFGMDM KR+L +GHP+ML
Subjt:  SSSDSAFGMDMIKRMLQTGHPTML
Arabidopsis top hitse value%identityAlignment
AT5G66930.2 unknown protein3.9e-0579.17Show/hide
Query:  SSSDSAFGMDMIKRMLQTGHPTML
        SSSDSAFGMDM KR+L +GHP+ML
Subjt:  SSSDSAFGMDMIKRMLQTGHPTML
AT5G66930.3 unknown protein3.9e-0579.17Show/hide
Query:  SSSDSAFGMDMIKRMLQTGHPTML
        SSSDSAFGMDM KR+L +GHP+ML
Subjt:  SSSDSAFGMDMIKRMLQTGHPTML

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATTTAATGGTATGTTGCCTATGATCAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGCTGCAGACTGGACACCCCACTATGCTGAGC
mRNA sequenceShow/hide mRNA sequence
ATATTTAATGGTATGTTGCCTATGATCAGTTCATCAGATTCTGCATTTGGAATGGACATGATCAAGAGGATGCTGCAGACTGGACACCCCACTATGCTGAGC
Protein sequenceShow/hide protein sequence
IFNGMLPMISSSDSAFGMDMIKRMLQTGHPTMLS