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MS011421 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011421
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprecursor of CEP8-like
Genome locationscaffold239:1795438..1795710
RNA-Seq ExpressionMS011421
SyntenyMS011421
Gene Ontology termsGO:0048364 - root development (biological process)
GO:0050793 - regulation of developmental process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB55919.1 hypothetical protein L484_008270 [Morus notabilis]1.9e-0854.29Show/hide
Query:  ISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        + HE V  VE RHLKSTR   + CSK  + + +   +S+ + + +KAEHV+DFRPT+PGHSPGVGH INN
Subjt:  ISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

KAE8647497.1 hypothetical protein Csa_004238, partial [Cucumis sativus]8.9e-1461.63Show/hide
Query:  LVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILN-----PKA---AAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        +++VLVLC+S+EGV YVECRHLKS+RSC K CSK +      P A   +AGN   QQ    KAE  +DFRPTSPGHSPGVGH INN
Subjt:  LVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILN-----PKA---AAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

KAF3438932.1 hypothetical protein FNV43_RR17207 [Rhamnella rubrinervis]5.6e-0850.63Show/hide
Query:  LVLVLCISHEGVYYVECRHLKSTRSC---TKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        L+L + I HE V ++E RHLKS RS    +   S  +N +A  G  +  Q + +K EH++DFRPTSPGHSPGVGH INN
Subjt:  LVLVLCISHEGVYYVECRHLKSTRSC---TKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

KAF3961816.1 hypothetical protein CMV_013603 [Castanea mollissima]2.4e-1149.45Show/hide
Query:  MKTTRTQRLSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAA--GNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        M TT+   + A +LVLVL   H G+  VE RHLKS ++    CS  +N   AA  G+ + Q ++ +K EHV+DFRPT PGHSPGVGH IN+
Subjt:  MKTTRTQRLSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAA--GNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

KAG6595044.1 hypothetical protein SDJN03_11597, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1554.72Show/hide
Query:  MKTTRTQRLSAL---VLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAA--------------AGNHSQQQDKATKAEHVEDFRPTSPGHSPGV
        MKT  TQRLS +   +L L+LC+SHE V YVECRHLKS+R   K C+K +NP A               AGN  +Q+ K +KAE  +DFRPTSPGHSPGV
Subjt:  MKTTRTQRLSAL---VLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAA--------------AGNHSQQQDKATKAEHVEDFRPTSPGHSPGV

Query:  GHRINN
        GH INN
Subjt:  GHRINN

TrEMBL top hitse value%identityAlignment
A0A061DGB8 tRNA Delta(2)-isopentenylpyrophosphate transferase, putative6.0e-0846.39Show/hide
Query:  MKTTRTQRLSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPK-----AAAGNHSQQ---QDKATKAEHVEDFRPTSPGHSPGVGHRINN
        M + R + +  L+LVL+LC     VY VE RHL+S +SC K CS+    +        G+HS     Q++ +KAE+++DFRPTSPGHSPGVGH I N
Subjt:  MKTTRTQRLSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPK-----AAAGNHSQQ---QDKATKAEHVEDFRPTSPGHSPGVGHRINN

A0A0A0KGB6 Uncharacterized protein1.3e-1058.54Show/hide
Query:  LVLCISHEGVYYVECRHLKSTRSCTKHCSKILN-----PKA---AAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        +V  + +EGV YVECRHLKS+RSC K CSK +      P A   +AGN   QQ    KAE  +DFRPTSPGHSPGVGH INN
Subjt:  LVLCISHEGVYYVECRHLKSTRSCTKHCSKILN-----PKA---AAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

A0A1R3K4N2 Uncharacterized protein3.5e-0847.67Show/hide
Query:  LSALVLVLVLCISHE-GVYYVECRHLKS--TRSCTKHCSKILNPKAAAGNHS--QQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        L+A V +LVL + HE  V  VE RHL+S   R C++   +     A  G HS    Q+++ K ++V+DFRPT+PGHSPGVGH INN
Subjt:  LSALVLVLVLCISHE-GVYYVECRHLKS--TRSCTKHCSKILNPKAAAGNHS--QQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

A0A7N2R6X2 Uncharacterized protein1.3e-1050.62Show/hide
Query:  ALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAA--GNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        A +LVLVL   + G+  VE RHLKS ++    CS  +N    A  G+H+ Q ++ +K EHV+DFRPT PGHSPGVGH IN+
Subjt:  ALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAA--GNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

W9R6N3 Uncharacterized protein9.3e-0954.29Show/hide
Query:  ISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN
        + HE V  VE RHLKSTR   + CSK  + + +   +S+ + + +KAEHV+DFRPT+PGHSPGVGH INN
Subjt:  ISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN

SwissProt top hitse value%identityAlignment
P0DN96 Precursor of CEP76.0e-0536.36Show/hide
Query:  LSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGH
        L++L+L+L++ +  +  + VE R LKS+R         ++ K AAGN +      T+   ++ FRPT+PG+SPG+GH
Subjt:  LSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGH

P0DN97 Precursor of CEP81.7e-0434.21Show/hide
Query:  VLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAA---AGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGH
        +L++ + +SHE +   E RHL++ R   K+ +  ++  A     G  S + D + +   V++FRPT+PG+SPG+GH
Subjt:  VLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAA---AGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGH

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGAAGACTACTCGTACTCAGAGGCTTTCTGCCTTGGTTCTTGTTTTGGTGTTGTGTATTAGCCATGAGGGCGTTTATTACGTAGAATGCCGCCATTTGAAGTC
CACAAGATCATGCACCAAACACTGCTCCAAAATCCTCAATCCCAAGGCCGCCGCCGGTAATCATAGTCAGCAGCAAGACAAGGCGACCAAAGCAGAGCATGTTGAAGACT
TTCGTCCCACATCGCCCGGCCACAGCCCCGGAGTTGGCCACCGTATCAACAAC
mRNA sequenceShow/hide mRNA sequence
ATGGTGATGAAGACTACTCGTACTCAGAGGCTTTCTGCCTTGGTTCTTGTTTTGGTGTTGTGTATTAGCCATGAGGGCGTTTATTACGTAGAATGCCGCCATTTGAAGTC
CACAAGATCATGCACCAAACACTGCTCCAAAATCCTCAATCCCAAGGCCGCCGCCGGTAATCATAGTCAGCAGCAAGACAAGGCGACCAAAGCAGAGCATGTTGAAGACT
TTCGTCCCACATCGCCCGGCCACAGCCCCGGAGTTGGCCACCGTATCAACAAC
Protein sequenceShow/hide protein sequence
MVMKTTRTQRLSALVLVLVLCISHEGVYYVECRHLKSTRSCTKHCSKILNPKAAAGNHSQQQDKATKAEHVEDFRPTSPGHSPGVGHRINN