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MS011423 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011423
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprecursor of CEP3
Genome locationscaffold239:1814076..1814360
RNA-Seq ExpressionMS011423
SyntenyMS011423
Gene Ontology termsGO:0048364 - root development (biological process)
GO:0050793 - regulation of developmental process (biological process)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595043.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2261.17Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAH--FHGDSVGEEGSTPAADSSPTV------TAPGRKVDDFRPTTPGHSPGVGHS
        M PT L+  FLF+AL++  H IDSAS+RPLKT TN QLS R AK AH  FHG SV E   T  A S+P+       ++PGRK+DDFRPTTPGHSPGVGHS
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAH--FHGDSVGEEGSTPAADSSPTV------TAPGRKVDDFRPTTPGHSPGVGHS

Query:  LQN
        +QN
Subjt:  LQN

KAG6604187.1 hypothetical protein SDJN03_04796, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2059Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAH--FHGDSVGEEGSTPAAD---SSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN
        MAPTKL+F FLF AL+VL +  +S  +RPLKTDTN QL +R AK  H  FHG+SV E   T   +   ++   ++PGRK+DDFRPTTPGHSPGVGHS+QN
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAH--FHGDSVGEEGSTPAAD---SSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN

KAG7027066.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2261.17Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAH--FHGDSVGEEGSTPAADSSPTV------TAPGRKVDDFRPTTPGHSPGVGHS
        M PT L+  FLF+AL++  H IDSAS+RPLKT TN QLS R AK AH  FHG SV E   T  A S+P+       ++PGRK+DDFRPTTPGHSPGVGHS
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAH--FHGDSVGEEGSTPAADSSPTV------TAPGRKVDDFRPTTPGHSPGVGHS

Query:  LQN
        +QN
Subjt:  LQN

KGN48516.1 hypothetical protein Csa_002724 [Cucumis sativus]6.9e-1750.47Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAHF--HGDSVGEEGST---------PAADSSPTVTAPGRKVDDFRPTTPGHSPG
        MAPTKL+F FLF++L++L H +D A +RPL T T + QLS  L K  HF  HG ++ E  ++         P   S+   + PGRK+DDFRPTTPGHSPG
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAHF--HGDSVGEEGST---------PAADSSPTVTAPGRKVDDFRPTTPGHSPG

Query:  VGHSLQN
        VGHS++N
Subjt:  VGHSLQN

TYK12897.1 hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa]2.2e-1552.34Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAH--FHGDSVGE-EGSTPAADSSPTV--------TAPGRKVDDFRPTTPGHSPG
        MA TKL+F FLF++L++L H ID A +RPL T T + QLS  L    H  FHG +V E + S   A S+P          + PGRK+DDFRPTTPGHSPG
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAH--FHGDSVGE-EGSTPAADSSPTV--------TAPGRKVDDFRPTTPGHSPG

Query:  VGHSLQN
        VGHS++N
Subjt:  VGHSLQN

TrEMBL top hitse value%identityAlignment
A0A059AML3 Uncharacterized protein4.1e-0738.4Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQ-------------LSKRLAK-----GAHFHGDSVGEE-----GSTPAADSSPTVTA-------
        MAP K+ + F F+ L+ L   + S  AR LK     Q             L K L K       + HG+ + +       +TPA   S T+ A       
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQ-------------LSKRLAK-----GAHFHGDSVGEE-----GSTPAADSSPTVTA-------

Query:  PGRKVDDFRPTTPGHSPGVGHSLQN
        PGR +DDFRPT PGHSPGVGHSLQN
Subjt:  PGRKVDDFRPTTPGHSPGVGHSLQN

A0A059BZX8 Uncharacterized protein4.1e-0738.4Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQ-------------LSKRLAK-----GAHFHGDSVGEE-----GSTPAADSSPTVTA-------
        MAP K+ + F F+ L+ L   + S  AR LK     Q             L K L K       + HG+ + +       +TPA   S T+ A       
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQ-------------LSKRLAK-----GAHFHGDSVGEE-----GSTPAADSSPTVTA-------

Query:  PGRKVDDFRPTTPGHSPGVGHSLQN
        PGR +DDFRPT PGHSPGVGHSLQN
Subjt:  PGRKVDDFRPTTPGHSPGVGHSLQN

A0A0A0KLC0 Uncharacterized protein3.3e-1750.47Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAHF--HGDSVGEEGST---------PAADSSPTVTAPGRKVDDFRPTTPGHSPG
        MAPTKL+F FLF++L++L H +D A +RPL T T + QLS  L K  HF  HG ++ E  ++         P   S+   + PGRK+DDFRPTTPGHSPG
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAHF--HGDSVGEEGST---------PAADSSPTVTAPGRKVDDFRPTTPGHSPG

Query:  VGHSLQN
        VGHS++N
Subjt:  VGHSLQN

A0A4D6LRW0 Uncharacterized protein1.3e-0845.45Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTD--TNDQLSKRL--AKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN
        MA  KLT   + VAL++L   ++S   R LK D  T  Q+ +R+     A F  D V     TP     P+  APGR VD+FRPT PGHSPGVGHS+ N
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTD--TNDQLSKRL--AKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN

A0A5D3CLS2 Uncharacterized protein1.1e-1552.34Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAH--FHGDSVGE-EGSTPAADSSPTV--------TAPGRKVDDFRPTTPGHSPG
        MA TKL+F FLF++L++L H ID A +RPL T T + QLS  L    H  FHG +V E + S   A S+P          + PGRK+DDFRPTTPGHSPG
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDT-NDQLSKRLAKGAH--FHGDSVGE-EGSTPAADSSPTV--------TAPGRKVDDFRPTTPGHSPG

Query:  VGHSLQN
        VGHS++N
Subjt:  VGHSLQN

SwissProt top hitse value%identityAlignment
A0A1I9LMX5 Precursor of CEP91.1e-0440.74Show/hide
Query:  HAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTV--TAPG---RKVDDFRPTTPGHSPGVGHSLQN
        H    A+ +  K D       RL K    +G    + GST   D +PT    +PG   +K DDF+PTTPGHSPGVGH+++N
Subjt:  HAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTV--TAPG---RKVDDFRPTTPGHSPGVGHSLQN

P0DN96 Precursor of CEP76.9e-0431.87Show/hide
Query:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGH
        MA   LT + L + ++VL         RPLK+     +SK+ A G                ++ S  +T     +D FRPT PG+SPG+GH
Subjt:  MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGH

Q058G9 Precursor of CEP51.1e-0432.65Show/hide
Query:  KLTFVFLFVALMVLFHAIDSASARPLKTDT-------NDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN
        K T    +  ++V F   +    R LK D        + +    LAK      D    + S P     P+ +  G+  +DFRPTTPGHSPG+GHSL +
Subjt:  KLTFVFLFVALMVLFHAIDSASARPLKTDT-------NDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN

Arabidopsis top hitse value%identityAlignment
AT2G23440.1 unknown protein1.4e-0433.33Show/hide
Query:  VFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN
        V++F  + +L  ++ S   R L   T     +  A G+           S+P  +  P  + P   VD FRPT PGHSPG+GHS+ N
Subjt:  VFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN

AT3G50610.1 unknown protein7.6e-0640.74Show/hide
Query:  HAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTV--TAPG---RKVDDFRPTTPGHSPGVGHSLQN
        H    A+ +  K D       RL K    +G    + GST   D +PT    +PG   +K DDF+PTTPGHSPGVGH+++N
Subjt:  HAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTV--TAPG---RKVDDFRPTTPGHSPGVGHSLQN

AT5G66815.1 unknown protein7.6e-0632.65Show/hide
Query:  KLTFVFLFVALMVLFHAIDSASARPLKTDT-------NDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN
        K T    +  ++V F   +    R LK D        + +    LAK      D    + S P     P+ +  G+  +DFRPTTPGHSPG+GHSL +
Subjt:  KLTFVFLFVALMVLFHAIDSASARPLKTDT-------NDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN

AT5G66816.1 unknown protein3.2e-0438.1Show/hide
Query:  LMVLFHAIDSASARPL-KTDTNDQLSKRLAKG--AHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN
        +  +F+ I    AR L KTD  D        G    F   S G               A G K DDF PTTPGHSPGVGH+++N
Subjt:  LMVLFHAIDSASARPL-KTDTNDQLSKRLAKG--AHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCAACCAAGCTAACCTTTGTGTTTCTTTTCGTTGCCCTTATGGTTCTCTTTCATGCAATTGATTCTGCCTCTGCCCGTCCACTGAAAACAGACACAAACGATCA
ACTCTCGAAGAGGCTGGCAAAAGGAGCTCATTTTCATGGTGATAGCGTGGGGGAAGAAGGGTCGACTCCGGCCGCGGATTCGTCTCCAACAGTTACTGCCCCGGGCCGAA
AGGTGGATGACTTCAGGCCAACCACTCCCGGCCATAGCCCCGGCGTAGGCCATTCACTCCAGAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCAACCAAGCTAACCTTTGTGTTTCTTTTCGTTGCCCTTATGGTTCTCTTTCATGCAATTGATTCTGCCTCTGCCCGTCCACTGAAAACAGACACAAACGATCA
ACTCTCGAAGAGGCTGGCAAAAGGAGCTCATTTTCATGGTGATAGCGTGGGGGAAGAAGGGTCGACTCCGGCCGCGGATTCGTCTCCAACAGTTACTGCCCCGGGCCGAA
AGGTGGATGACTTCAGGCCAACCACTCCCGGCCATAGCCCCGGCGTAGGCCATTCACTCCAGAAT
Protein sequenceShow/hide protein sequence
MAPTKLTFVFLFVALMVLFHAIDSASARPLKTDTNDQLSKRLAKGAHFHGDSVGEEGSTPAADSSPTVTAPGRKVDDFRPTTPGHSPGVGHSLQN