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MS011426 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011426
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold239:1841728..1842108
RNA-Seq ExpressionMS011426
SyntenyMS011426
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604184.1 hypothetical protein SDJN03_04793, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3161.65Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLHD
        M CLD+YK+PDQKGH PPMSPRLSFSNDFVES    H         + Q     PN + S DFEFS  ++ +  TM AADELFFKGKLLPTLRD+LLLHD
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLHD

Query:  DDDGTAASSF----GLPKWKAFLSLKRPSAQDG
        DDD     SF    GLPKWK FLSLKR S  DG
Subjt:  DDDGTAASSF----GLPKWKAFLSLKRPSAQDG

KAG7034345.1 hypothetical protein SDJN02_04072, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-3263.16Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLHD
        M CLD+YK+PDQKGH PPMSPRLSFSNDFVE    SHH        + Q     PN + S DFEFS  ++ +  TM AADELFFKGKLLPTLRD+LLLHD
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLHD

Query:  DDDGTAASSF----GLPKWKAFLSLKRPSAQDG
        DDD  A  SF    GLPKWK FLSLKR S  DG
Subjt:  DDDGTAASSF----GLPKWKAFLSLKRPSAQDG

XP_022132699.1 uncharacterized protein LOC111005497 [Momordica charantia]4.8e-6699.21Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLPTLRDQLLLHDDD
        MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELF KGKLLPTLRDQLLLHDDD
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLPTLRDQLLLHDDD

Query:  DGTAASSFGLPKWKAFLSLKRPSAQDG
        DGTAASSFGLPKWKAFLSLKRPSAQDG
Subjt:  DGTAASSFGLPKWKAFLSLKRPSAQDG

XP_022950341.1 uncharacterized protein LOC111453452 [Cucurbita moschata]5.5e-3061.19Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLH-
        M CLD+YK+PDQKGH PPMSPRLSFSNDFVES    H         + Q     PN + S DFEFS  ++ +  TM AADELFFKGKLLPTLRD+LLLH 
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLH-

Query:  DDDDGTAASSF----GLPKWKAFLSLKRPSAQDG
        DDDD     SF    GLPKWK FLSLKR S  DG
Subjt:  DDDDGTAASSF----GLPKWKAFLSLKRPSAQDG

XP_023544728.1 uncharacterized protein LOC111804229 [Cucurbita pepo subsp. pepo]4.2e-3061.19Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLH-
        M CLD+YK+PDQKGH PPMSPRLSFSNDFVES    H         + Q     PN + S DFEFS  ++ +  TM AADELFFKGKLLPTLRD+LLLH 
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLH-

Query:  DDDDGTAASSF----GLPKWKAFLSLKRPSAQDG
        DDDD     SF    GLPKWK FLSLKR S  DG
Subjt:  DDDDGTAASSF----GLPKWKAFLSLKRPSAQDG

TrEMBL top hitse value%identityAlignment
A0A0A0KIB7 Uncharacterized protein4.4e-2558.21Show/hide
Query:  MGCLDTYKN-PDQKGHCPPMSPRLSFSNDFVESQ---SQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS-SSSAVTTMAAADELFFKGKLLPTLRDQLL
        M CLDTYKN  DQKG  PPMSPRLSFSNDFVES    S +      + PK+       PN   S DFEFS + +  T M AAD+LFFKGKLLPTLRD+LL
Subjt:  MGCLDTYKN-PDQKGHCPPMSPRLSFSNDFVESQ---SQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS-SSSAVTTMAAADELFFKGKLLPTLRDQLL

Query:  LHDDDDGTA--ASSFGLPKWKAFLSLKRPSAQDG
        + DDD+  A      GLPKWK FLSLKR S  DG
Subjt:  LHDDDDGTA--ASSFGLPKWKAFLSLKRPSAQDG

A0A5D3CPD3 Uncharacterized protein9.9e-2557.14Show/hide
Query:  MGCLDTYKN-PDQKGHCPPMSPRLSFSNDFVESQ---SQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS-SSSAVTTMAAADELFFKGKLLPTLRDQLL
        M CLDTYKN  DQKG  PPMSPRLSFSNDFVES    S ++     + PK+        N+  S DFEFS + +  T M AAD+LFFKGKLLPTLRD+LL
Subjt:  MGCLDTYKN-PDQKGHCPPMSPRLSFSNDFVESQ---SQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS-SSSAVTTMAAADELFFKGKLLPTLRDQLL

Query:  LHDDDD-GTAASSFGLPKWKAFLSLKRPSAQDG
        + DD+D        GLPKWK FLSLKR S  DG
Subjt:  LHDDDD-GTAASSFGLPKWKAFLSLKRPSAQDG

A0A6J1BTV0 uncharacterized protein LOC1110054972.3e-6699.21Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLPTLRDQLLLHDDD
        MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELF KGKLLPTLRDQLLLHDDD
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLPTLRDQLLLHDDD

Query:  DGTAASSFGLPKWKAFLSLKRPSAQDG
        DGTAASSFGLPKWKAFLSLKRPSAQDG
Subjt:  DGTAASSFGLPKWKAFLSLKRPSAQDG

A0A6J1GEJ6 uncharacterized protein LOC1114534522.7e-3061.19Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLH-
        M CLD+YK+PDQKGH PPMSPRLSFSNDFVES    H         + Q     PN + S DFEFS  ++ +  TM AADELFFKGKLLPTLRD+LLLH 
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLH-

Query:  DDDDGTAASSF----GLPKWKAFLSLKRPSAQDG
        DDDD     SF    GLPKWK FLSLKR S  DG
Subjt:  DDDDGTAASSF----GLPKWKAFLSLKRPSAQDG

A0A6J1IL61 uncharacterized protein LOC1114780323.5e-3061.48Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLHD
        M CLD+YK+PDQKGH PPMSPRLSFSNDFVE    SHH        + Q     PN ++S DFEFS  ++ +  TM AADELFFKGKLLPTLRD+LLL D
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFS--SSSAVTTMAAADELFFKGKLLPTLRDQLLLHD

Query:  DDDGTA--ASSF----GLPKWKAFLSLKRPSAQDG
        DDD  A    SF    GLPKWK FLSLKR S  DG
Subjt:  DDDGTA--ASSF----GLPKWKAFLSLKRPSAQDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19200.1 unknown protein2.3e-0536.27Show/hide
Query:  RLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLP----------TLRDQLLLHDDDDGTAASSFGLP
        R+SFSNDF +S S+    + +   K  +       + +SSDF+F+  +   T +AADE+FF G LLP          TLRD+L   D D     SS G  
Subjt:  RLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLP----------TLRDQLLLHDDDDGTAASSFGLP

Query:  KW
         W
Subjt:  KW

AT3G50640.1 unknown protein2.7e-0631.15Show/hide
Query:  RLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLP---------TLRDQLLLHDDDDGTAASSFGL--
        R+SFSN+FVE +S+  + K         F  P      S+DF FS +    +M  ADE+F KGK+LP         TL ++LL  ++      ++F L  
Subjt:  RLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLP---------TLRDQLLLHDDDDGTAASSFGL--

Query:  -----------PKWKAFLSLKR
                     W+  L LKR
Subjt:  -----------PKWKAFLSLKR

AT5G66800.1 unknown protein6.6e-1336.91Show/hide
Query:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLP---------TLR
        M CL+ Y +    G   PMSPR+SFSNDFVE + ++  K    +P   Q      +S+ S +FEFS S+   TM  ADELF KGKLLP         TLR
Subjt:  MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLP---------TLR

Query:  DQLLLHDDDD-------------------GTAASSFGLPKWKAFLSLKR
        ++LL+ +D++                    +++SS    +WK  L LKR
Subjt:  DQLLLHDDDD-------------------GTAASSFGLPKWKAFLSLKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGCTTGGACACGTACAAGAACCCAGATCAGAAGGGACATTGCCCTCCCATGAGCCCAAGACTGTCCTTTTCCAACGACTTCGTCGAATCTCAATCTCAATCTCA
TCACAAGAAAGAAGAAAAAGCCCCAAAATTGGATCAGTTCCACTTCCCAACCCCAAATAGTACAATTTCCTCCGACTTCGAATTCTCATCATCATCAGCAGTGACGACCA
TGGCCGCCGCCGACGAGCTCTTCTTCAAGGGCAAATTGTTGCCCACTCTTAGAGACCAACTTCTCCTCCACGACGACGATGATGGCACAGCAGCCTCCTCATTCGGCTTA
CCAAAATGGAAAGCGTTTCTAAGCCTCAAGAGACCATCGGCCCAAGACGGG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGCTTGGACACGTACAAGAACCCAGATCAGAAGGGACATTGCCCTCCCATGAGCCCAAGACTGTCCTTTTCCAACGACTTCGTCGAATCTCAATCTCAATCTCA
TCACAAGAAAGAAGAAAAAGCCCCAAAATTGGATCAGTTCCACTTCCCAACCCCAAATAGTACAATTTCCTCCGACTTCGAATTCTCATCATCATCAGCAGTGACGACCA
TGGCCGCCGCCGACGAGCTCTTCTTCAAGGGCAAATTGTTGCCCACTCTTAGAGACCAACTTCTCCTCCACGACGACGATGATGGCACAGCAGCCTCCTCATTCGGCTTA
CCAAAATGGAAAGCGTTTCTAAGCCTCAAGAGACCATCGGCCCAAGACGGG
Protein sequenceShow/hide protein sequence
MGCLDTYKNPDQKGHCPPMSPRLSFSNDFVESQSQSHHKKEEKAPKLDQFHFPTPNSTISSDFEFSSSSAVTTMAAADELFFKGKLLPTLRDQLLLHDDDDGTAASSFGL
PKWKAFLSLKRPSAQDG