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MS011441 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011441
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIsochorismatase domain-containing protein
Genome locationscaffold239:2015484..2015646
RNA-Seq ExpressionMS011441
SyntenyMS011441
Gene Ontology termsNA
InterPro domainsIPR036380 - Isochorismatase-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2323433.1 hypothetical protein GH714_035428 [Hevea brasiliensis]5.8e-0549.09Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWK +ALL +D + D +R+  +  V+  KAIVPN+ KV E+ARQ+ + ++WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
XP_021688551.1 probable inactive nicotinamidase At3g16190 isoform X1 [Hevea brasiliensis]5.8e-0549.09Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWK +ALL +D + D +R+  +  V+  KAIVPN+ KV E+ARQ+ + ++WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
XP_021894301.1 probable inactive nicotinamidase At3g16190 [Carica papaya]1.5e-0552.73Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D + D +++  V  VN   AIVPN+ K  E+ARQ+ I I+WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
XP_023915773.1 probable inactive nicotinamidase At3g16190 isoform X3 [Quercus suber]5.8e-0550.91Show/hide
Query:  ADKWKHSALLALDGKRDLLRKVYD--VNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D ++D + +     VN  +AIVPN+ K  E+ARQ+ I +IWVV
Subjt:  ADKWKHSALLALDGKRDLLRKVYD--VNEAKAIVPNMTKVSELARQQRIFIIWVV
XP_030973103.1 probable inactive nicotinamidase At3g16190 isoform X1 [Quercus lobata]5.8e-0550.91Show/hide
Query:  ADKWKHSALLALDGKRDLLRKVYD--VNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D ++D + +     VN  +AIVPN+ K  E+ARQ+ I +IWVV
Subjt:  ADKWKHSALLALDGKRDLLRKVYD--VNEAKAIVPNMTKVSELARQQRIFIIWVV
TrEMBL top hitse value%identityAlignment
A0A6A6NE98 Uncharacterized protein2.8e-0549.09Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWK +ALL +D + D +R+  +  V+  KAIVPN+ KV E+ARQ+ + ++WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
A0A6P6BJ84 probable inactive nicotinamidase At3g16190 isoform X33.7e-0549.09Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D + D + +  +  VN  KAIVPN+ +  E+ARQ+ I ++WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
A0A6P6BJ93 probable inactive nicotinamidase At3g16190 isoform X23.7e-0549.09Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D + D + +  +  VN  KAIVPN+ +  E+ARQ+ I ++WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
A0A6P6BJE8 probable inactive nicotinamidase At3g16190 isoform X13.7e-0549.09Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D + D + +  +  VN  KAIVPN+ +  E+ARQ+ I ++WVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
A0A7N2R4I5 Isochorismatase domain-containing protein2.8e-0550.91Show/hide
Query:  ADKWKHSALLALDGKRDLLRKVYD--VNEAKAIVPNMTKVSELARQQRIFIIWVV
        ADKWKH+ALL +D ++D + +     VN  +AIVPN+ K  E+ARQ+ I +IWVV
Subjt:  ADKWKHSALLALDGKRDLLRKVYD--VNEAKAIVPNMTKVSELARQQRIFIIWVV
SwissProt top hitse value%identityAlignment
Q93Z51 Probable inactive nicotinamidase At3g161902.5e-0645.45Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        A++W+++ALL +D + D + +  V  V   K+IVPN+ +V ELARQ+ I +IWVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
Arabidopsis top hitse value%identityAlignment
AT3G16190.1 Isochorismatase family protein1.8e-0745.45Show/hide
Query:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV
        A++W+++ALL +D + D + +  V  V   K+IVPN+ +V ELARQ+ I +IWVV
Subjt:  ADKWKHSALLALDGKRDLLRK--VYDVNEAKAIVPNMTKVSELARQQRIFIIWVV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGCAGATAAGTGGAAGCACTCTGCTCTCCTTGCCCTTGACGGGAAAAGAGATTTATTGAGGAAGGTCTATGATGTGAATGAAGCAAAAGCTATAGTTCCAAACATGAC
AAAGGTCTCTGAACTTGCTAGGCAGCAACGTATTTTCATTATTTGGGTTGTA
mRNA sequenceShow/hide mRNA sequence
AAGGCAGATAAGTGGAAGCACTCTGCTCTCCTTGCCCTTGACGGGAAAAGAGATTTATTGAGGAAGGTCTATGATGTGAATGAAGCAAAAGCTATAGTTCCAAACATGAC
AAAGGTCTCTGAACTTGCTAGGCAGCAACGTATTTTCATTATTTGGGTTGTA
Protein sequenceShow/hide protein sequence
KADKWKHSALLALDGKRDLLRKVYDVNEAKAIVPNMTKVSELARQQRIFIIWVV