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MS011461 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS011461
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold239:2143794..2144114
RNA-Seq ExpressionMS011461
SyntenyMS011461
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G37409.1 unknown protein1.0e-0632.71Show/hide
Query:  SIVGRLRFLQREQVIDHRVPSFFFGAPVLVDQPLQERVHPLRQFRHLSLVAIRDPIQHRNEIAEIRHSSERYNLLNQLSERPRLFLIGHVVSEIPLPCRH
        S+V R+  LQREQVI+H V  F   A  LV Q LQ  +       HL L A  + +      + +  ++   +   +L E+   F +  +V+ + LPC H
Subjt:  SIVGRLRFLQREQVIDHRVPSFFFGAPVLVDQPLQERVHPLRQFRHLSLVAIRDPIQHRNEIAEIRHSSERYNLLNQLSERPRLFLIGHVVSEIPLPCRH

Query:  SHGDVER
         H  VER
Subjt:  SHGDVER

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATAGTAGGCAGGCTCCGATTCCTGCAGAGAGAGCAAGTGATCGATCATCGTGTTCCTTCCTTCTTCTTTGGTGCTCCGGTGCTCGTCGATCAGCCCCTGCAAGAACG
CGTCCATCCGCTTCGCCAATTTCGACACCTTTCTCTCGTAGCCATTAGGGATCCAATTCAGCATCGGAATGAAATCGCCGAGATTCGACACTCCTCCGAGCGATACAATC
TGCTTAATCAGCTCTCTGAACGGCCTCGCCTCTTCCTCATCGGTCACGTCGTCTCCGAAATACCTCTTCCCTGCCGCCATTCTCATGGAGATGTTGAACGT
mRNA sequenceShow/hide mRNA sequence
TCCATAGTAGGCAGGCTCCGATTCCTGCAGAGAGAGCAAGTGATCGATCATCGTGTTCCTTCCTTCTTCTTTGGTGCTCCGGTGCTCGTCGATCAGCCCCTGCAAGAACG
CGTCCATCCGCTTCGCCAATTTCGACACCTTTCTCTCGTAGCCATTAGGGATCCAATTCAGCATCGGAATGAAATCGCCGAGATTCGACACTCCTCCGAGCGATACAATC
TGCTTAATCAGCTCTCTGAACGGCCTCGCCTCTTCCTCATCGGTCACGTCGTCTCCGAAATACCTCTTCCCTGCCGCCATTCTCATGGAGATGTTGAACGT
Protein sequenceShow/hide protein sequence
SIVGRLRFLQREQVIDHRVPSFFFGAPVLVDQPLQERVHPLRQFRHLSLVAIRDPIQHRNEIAEIRHSSERYNLLNQLSERPRLFLIGHVVSEIPLPCRHSHGDVER